CK739921

Overview
NameCK739921
Unique NameCK739921
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length306
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK739921 vs. ExPASy Swiss-Prot
Match: FERB_ALOMA (Ferredoxin-B OS=Alocasia macrorrhiza PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 2.741e-13
Identity = 34/40 (85.00%), Postives = 37/40 (92.50%), Query Frame = 1
Query:    1 VDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEEL 120
            VDQS+ SFLDDDQ+GEG+VLTC AYPTSDV IETHKEEEL
Sbjct:   57 VDQSDGSFLDDDQIGEGWVLTCVAYPTSDVVIETHKEEEL 96          
BLAST of CK739921 vs. ExPASy Swiss-Prot
Match: FER_SOLNI (Ferredoxin OS=Solanum nigrum PE=1 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 3.580e-13
Identity = 33/42 (78.57%), Postives = 37/42 (88.10%), Query Frame = 1
Query:    1 VDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEELAG 126
            VDQS+ +FLDDDQM +GFVLTC AYP SDVTIETHKEE+L G
Sbjct:   56 VDQSDGNFLDDDQMADGFVLTCVAYPKSDVTIETHKEEDLTG 97          
BLAST of CK739921 vs. ExPASy Swiss-Prot
Match: FER_DATST (Ferredoxin OS=Datura stramonium PE=1 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 3.580e-13
Identity = 33/42 (78.57%), Postives = 37/42 (88.10%), Query Frame = 1
Query:    1 VDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEELAG 126
            VDQS+ ++LDDDQM +GFVLTC AYP SDVTIETHKEEEL G
Sbjct:   56 VDQSDGNYLDDDQMADGFVLTCVAYPQSDVTIETHKEEELTG 97          
BLAST of CK739921 vs. ExPASy Swiss-Prot
Match: FER_DATQU (Ferredoxin OS=Datura quercifolia PE=1 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 3.580e-13
Identity = 33/42 (78.57%), Postives = 37/42 (88.10%), Query Frame = 1
Query:    1 VDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEELAG 126
            VDQS+ ++LDDDQM +GFVLTC AYP SDVTIETHKEEEL G
Sbjct:   56 VDQSDGNYLDDDQMADGFVLTCVAYPQSDVTIETHKEEELTG 97          
BLAST of CK739921 vs. ExPASy Swiss-Prot
Match: FER2_HYONI (Ferredoxin-2 OS=Hyoscyamus niger PE=1 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 3.580e-13
Identity = 33/42 (78.57%), Postives = 37/42 (88.10%), Query Frame = 1
Query:    1 VDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEELAG 126
            VDQS+ +FLDDDQM +GFVLTC AYP SDVTIETHKEE+L G
Sbjct:   56 VDQSDGNFLDDDQMADGFVLTCVAYPQSDVTIETHKEEDLTG 97          
BLAST of CK739921 vs. ExPASy Swiss-Prot
Match: FER_GLEJA (Ferredoxin OS=Gleichenia japonica PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 4.676e-13
Identity = 33/40 (82.50%), Postives = 35/40 (87.50%), Query Frame = 1
Query:    1 VDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEEL 120
            VDQSEQSFLDDDQM EGFVLTC AYP  D+TIETH EE+L
Sbjct:   56 VDQSEQSFLDDDQMAEGFVLTCVAYPAGDITIETHAEEKL 95          
BLAST of CK739921 vs. ExPASy Swiss-Prot
Match: FER_TOBAC (Ferredoxin OS=Nicotiana tabacum PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 7.975e-13
Identity = 33/40 (82.50%), Postives = 36/40 (90.00%), Query Frame = 1
Query:    1 VDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEEL 120
            VDQS+ +FLDDDQM +GFVLTC AYP SDVTIETHKEEEL
Sbjct:   56 VDQSDGNFLDDDQMADGFVLTCVAYPQSDVTIETHKEEEL 95          
BLAST of CK739921 vs. ExPASy Swiss-Prot
Match: FER_SCOJA (Ferredoxin OS=Scopolia japonica PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 7.975e-13
Identity = 33/42 (78.57%), Postives = 36/42 (85.71%), Query Frame = 1
Query:    1 VDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEELAG 126
            VDQS+ +FLDDDQM +GFVLTC AYP SDV IETHKEEEL G
Sbjct:   56 VDQSDGNFLDDDQMADGFVLTCVAYPQSDVIIETHKEEELTG 97          
BLAST of CK739921 vs. ExPASy Swiss-Prot
Match: FER_LEUGL (Ferredoxin OS=Leucaena glauca PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 7.975e-13
Identity = 33/42 (78.57%), Postives = 38/42 (90.48%), Query Frame = 1
Query:    1 VDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEELAG 126
            +DQS+QSFLDD+Q+ EG+VLTCAAYP SDV IETHKEEEL G
Sbjct:   55 LDQSDQSFLDDEQIEEGWVLTCAAYPRSDVVIETHKEEELTG 96          
BLAST of CK739921 vs. ExPASy Swiss-Prot
Match: FER_BRYMA (Ferredoxin OS=Bryopsis maxima PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 7.975e-13
Identity = 33/42 (78.57%), Postives = 37/42 (88.10%), Query Frame = 1
Query:    1 VDQSEQSFLDDDQMGEGFVLTCAAYPTSDVTIETHKEEELAG 126
            VDQSEQ+FLDDDQM EG+VLTC AYPTSD TI TH+EEE+ G
Sbjct:   57 VDQSEQTFLDDDQMEEGYVLTCVAYPTSDCTILTHQEEEMIG 98          
The following BLAST results are available for this feature:
BLAST of CK739921 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 73
Match NameE-valueIdentityDescription
FERB_ALOMA2.741e-1385.00Ferredoxin-B OS=Alocasia macrorrhiza PE=1 SV=1[more]
FER_SOLNI3.580e-1378.57Ferredoxin OS=Solanum nigrum PE=1 SV=1[more]
FER_DATST3.580e-1378.57Ferredoxin OS=Datura stramonium PE=1 SV=1[more]
FER_DATQU3.580e-1378.57Ferredoxin OS=Datura quercifolia PE=1 SV=1[more]
FER2_HYONI3.580e-1378.57Ferredoxin-2 OS=Hyoscyamus niger PE=1 SV=1[more]
FER_GLEJA4.676e-1382.50Ferredoxin OS=Gleichenia japonica PE=1 SV=1[more]
FER_TOBAC7.975e-1382.50Ferredoxin OS=Nicotiana tabacum PE=1 SV=1[more]
FER_SCOJA7.975e-1378.57Ferredoxin OS=Scopolia japonica PE=1 SV=1[more]
FER_LEUGL7.975e-1378.57Ferredoxin OS=Leucaena glauca PE=1 SV=1[more]
FER_BRYMA7.975e-1378.57Ferredoxin OS=Bryopsis maxima PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_6313 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE61H07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK739921 ID=CK739921; Name=CK739921; organism=Citrus sinensis; type=EST; length=306bp
GTTGACCAGTCGGAGCAAAGCTTTCTGGATGATGATCAAATGGGAGAAGG
TTTTGTTCTCACTTGTGCTGCTTATCCAACAAGTGATGTTACTATAGAGA
CTCACAAGGAAGAGGAGCTCGCTGGTTAATAATGTGCTCTTGATATCTCA
TTATTATCTTCTCTTTTATGTGTTGTGTTTTGTCTGATTATTTTAATGCT
TTGAAAGGGATATTGAGTAATTTGAGAATGATTCTTGTAATGTGTCTTTA
TTTCTTGGTGCAAAGAAGTTGTAATTGCACCGGCCATGAATGCGCATCGT
ACCTAG
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