CK739929

Overview
NameCK739929
Unique NameCK739929
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length512
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK739929 vs. ExPASy Swiss-Prot
Match: PME6_ARATH (Probable pectinesterase/pectinesterase inhibitor 6 OS=Arabidopsis thaliana GN=PME6 PE=2 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 1.065e-41
Identity = 84/168 (50.00%), Postives = 110/168 (65.48%), Query Frame = 1
Query:    4 VINIKAGVYEETVRVPFEKKNVVFLGDGMGKTVITGSLNVGQQGVSTYESATVGVLGDGFMASGLTIQNTAGPDAHQAVAFRSDSDLSIIENCEFLGNQDTLYAHSLRQFYKKCRIQGNVDFIFGNSPSIFHDCEILVAPRQLKPEKGENNAVTAHGRTDPAQWSGFV 507
            VI +KAGVY E V +    KNV+ +GDG+  T++TG+ NV Q G +T+ SAT  V G+GF+A G+T +NTAGP+ HQAVA RS SD S+   C F G QDTLY HS RQF + C I G VDFIFG++ +I  +C I       KP  G+ N +TA  R +P + +GFV
Sbjct:  282 VIYVKAGVYRENVVIKKSIKNVMVIGDGIDSTIVTGNRNV-QDGTTTFRSATFAVSGNGFIAQGITFENTAGPEKHQAVALRSSSDFSVFYACSFKGYQDTLYLHSSRQFLRNCNIYGTVDFIFGDATAILQNCNIYAR----KPMSGQKNTITAQSRKEPDETTGFV 444          
BLAST of CK739929 vs. ExPASy Swiss-Prot
Match: PME41_ARATH (Probable pectinesterase/pectinesterase inhibitor 41 OS=Arabidopsis thaliana GN=PME41 PE=2 SV=2)

HSP 1 Score: 167.548 bits (423), Expect = 3.100e-41
Identity = 86/167 (51.50%), Postives = 114/167 (68.26%), Query Frame = 1
Query:    1 FVINIKAGVYEETVRVPFEKKNVVFLGDGMGKTVITGSLNVGQQGVSTYESATVGVLGDGFMASGLTIQNTAGPDAHQAVAFRSDSDLSIIENCEFLGNQDTLYAHSLRQFYKKCRIQGNVDFIFGNSPSIFHDCEILVAPRQLKPEKGENNAVTAHGRTDPAQWSG 501
            FVI + +GVYEE V +   K+ ++ +GDG+ +TV+TG+ NV   G +T+ SAT  V    F+A  +T +NTAGP+ HQAVA RS +DLSI  +C F   QDTLY HSLRQFY++C I G VDFIFGN+  +F DC +   PRQ  P + + NA+TA GRTDP Q +G
Sbjct:  290 FVIYVTSGVYEENVVIAKNKRYLMMIGDGINRTVVTGNRNV-VDGWTTFNSATFAVTSPNFVAVNMTFRNTAGPEKHQAVAMRSSADLSIFYSCSFEAYQDTLYTHSLRQFYRECDIYGTVDFIFGNAAVVFQDCNLY--PRQ--PMQNQFNAITAQGRTDPNQNTG 451          
BLAST of CK739929 vs. ExPASy Swiss-Prot
Match: PME17_ARATH (Probable pectinesterase/pectinesterase inhibitor 17 OS=Arabidopsis thaliana GN=PME17 PE=2 SV=2)

HSP 1 Score: 166.007 bits (419), Expect = 9.019e-41
Identity = 84/169 (49.70%), Postives = 111/169 (65.68%), Query Frame = 1
Query:    1 FVINIKAGVYEETVRVPFEKKNVVFLGDGMGKTVITGSLNVGQQGVSTYESATVGVLGDGFMASGLTIQNTAGPDAHQAVAFRSDSDLSIIENCEFLGNQDTLYAHSLRQFYKKCRIQGNVDFIFGNSPSIFHDCEILVAPRQLKPEKGENNAVTAHGRTDPAQWSGFV 507
            FVI +K GVY E + +   KKNV+  GDG+GKT+ITGS +VG  G +T+ SATV  +GDGF+A G+T +NTAG    QAVA RS SDLS+   C F   QDTLY HS RQFY+ C + G VDFIFGN+ ++  +C I       +  + + N +TA GR+DP Q +G +
Sbjct:  233 FVIYVKQGVYSENLEI--RKKNVMLRGDGIGKTIITGSKSVGG-GTTTFNSATVAAVGDGFIARGITFRNTAGASNEQAVALRSGSDLSVFYQCSFEAYQDTLYVHSNRQFYRDCDVYGTVDFIFGNAAAVLQNCNIFA-----RRPRSKTNTITAQGRSDPNQNTGII 393          
BLAST of CK739929 vs. ExPASy Swiss-Prot
Match: PME59_ARATH (Probable pectinesterase/pectinesterase inhibitor 59 OS=Arabidopsis thaliana GN=PME59 PE=2 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 1.538e-40
Identity = 85/167 (50.90%), Postives = 111/167 (66.47%), Query Frame = 1
Query:    1 FVINIKAGVYEETVRVPFEKKNVVFLGDGMGKTVITGSLNVGQQGVSTYESATVGVLGDGFMASGLTIQNTAGPDAHQAVAFRSDSDLSIIENCEFLGNQDTLYAHSLRQFYKKCRIQGNVDFIFGNSPSIFHDCEILVAPRQLKPEKGENNAVTAHGRTDPAQWSG 501
            FVI +K G+Y+E + V     +++ +GDGM  T+ITG  +V Q G +TY SAT G+ G  F+A G+T +NTAGP   QAVA RS SDLSI   C   G QDTL  HS RQFY++C I G VDFIFGN+ ++F +C  L+ PR  +P KG+ N +TA GR DP Q +G
Sbjct:  252 FVIYVKRGIYQENINVRLNNDDIMLVGDGMRSTIITGGRSV-QGGYTTYNSATAGIEGLHFIAKGITFRNTAGPAKGQAVALRSSSDLSIFYKCSIEGYQDTLMVHSQRQFYRECYIYGTVDFIFGNAAAVFQNC--LILPR--RPLKGQANVITAQGRADPFQNTG 413          
BLAST of CK739929 vs. ExPASy Swiss-Prot
Match: PME36_ARATH (Probable pectinesterase/pectinesterase inhibitor 36 OS=Arabidopsis thaliana GN=PME36 PE=2 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 3.427e-40
Identity = 82/166 (49.40%), Postives = 108/166 (65.06%), Query Frame = 1
Query:    4 VINIKAGVYEETVRVPFEKKNVVFLGDGMGKTVITGSLNVGQQGVSTYESATVGVLGDGFMASGLTIQNTAGPDAHQAVAFRSDSDLSIIENCEFLGNQDTLYAHSLRQFYKKCRIQGNVDFIFGNSPSIFHDCEILVAPRQLKPEKGENNAVTAHGRTDPAQWSG 501
            +I IKAGVY E + +    KN++ +GDGM +T++T + NV   G +TY SAT GV GDGF A  +T +NTAGP  HQAVA R  SDLS+   C F G QDTL+ HSLRQFY+   I G +DFIFG++ ++F +C+I V     +P   + N +TA GR DP   SG
Sbjct:  238 IIYIKAGVYNEKIEIDRHMKNIMLVGDGMDRTIVTNNRNV-PDGSTTYGSATFGVSGDGFWARDITFENTAGPHKHQAVALRVSSDLSLFYRCSFKGYQDTLFTHSLRQFYRDRHIYGTIDFIFGDAAAVFQNCDIFVR----RPMDHQGNMITAQGRDDPHTNSG 398          
BLAST of CK739929 vs. ExPASy Swiss-Prot
Match: PME28_ARATH (Putative pectinesterase/pectinesterase inhibitor 28 OS=Arabidopsis thaliana GN=PME28 PE=2 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 4.476e-40
Identity = 82/169 (48.52%), Postives = 117/169 (69.23%), Query Frame = 1
Query:    1 FVINIKAGVYEETVRVPFEKKNVVFLGDGMGKTVITGSLNVGQQGVSTYESATVGVLGDGFMASGLTIQNTAGPDAHQAVAFRSDSDLSIIENCEFLGNQDTLYAHSLRQFYKKCRIQGNVDFIFGNSPSIFHDCEILVAPRQLKPEKGENNAVTAHGRTDPAQWSGFV 507
            FV++IK G+Y+E V+V     ++VF+GDG  KTVI+GS +  + G++TY++ATV ++GD F+A  +  +NTAG   HQAVA R  +D SI  NC+F G QDTLYAHS RQFY+ C I G +DF+FG++ ++F +C +LV     KP   +   +TAHGR DP + +GFV
Sbjct:  281 FVVHIKEGIYKEYVQVNRSMTHLVFIGDGPDKTVISGSKSY-KDGITTYKTATVAIVGDHFIAKNIAFENTAGAIKHQAVAIRVLADESIFYNCKFDGYQDTLYAHSHRQFYRDCTISGTIDFLFGDAAAVFQNCTLLVR----KPLLNQACPITAHGRKDPRESTGFV 444          
BLAST of CK739929 vs. ExPASy Swiss-Prot
Match: PMEU1_SOLLC (Pectinesterase/pectinesterase inhibitor U1 OS=Solanum lycopersicum GN=PMEU1 PE=2 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 5.846e-40
Identity = 86/169 (50.89%), Postives = 107/169 (63.31%), Query Frame = 1
Query:    1 FVINIKAGVYEETVRVPFEKKNVVFLGDGMGKTVITGSLNVGQQGVSTYESATVGVLGDGFMASGLTIQNTAGPDAHQAVAFRSDSDLSIIENCEFLGNQDTLYAHSLRQFYKKCRIQGNVDFIFGNSPSIFHDCEILVAPRQLKPEKGENNAVTAHGRTDPAQWSGFV 507
            +VI IKAGVY E V VP +K N++F+GDG   T+IT S NV Q G +T+ SATV  +    +A  +T QNTAG   HQAVA    SDLS    C+ L  QDTLY HS RQF+ +C + G VDFIFGN  ++F DC+I       +P  G+ N VTA GRTDP Q +G V
Sbjct:  301 YVIRIKAGVYRENVDVPKKKTNIMFMGDGKSNTIITASRNV-QDGSTTFHSATVVRVAGKVLARDITFQNTAGASKHQAVALCVGSDLSAFYRCDMLAYQDTLYVHSNRQFFVQCLVAGTVDFIFGNGAAVFQDCDI----HARRPGSGQKNMVTAQGRTDPNQNTGIV 464          
BLAST of CK739929 vs. ExPASy Swiss-Prot
Match: PME21_ARATH (Probable pectinesterase/pectinesterase inhibitor 21 OS=Arabidopsis thaliana GN=PME21 PE=2 SV=2)

HSP 1 Score: 162.925 bits (411), Expect = 7.635e-40
Identity = 81/170 (47.65%), Postives = 116/170 (68.24%), Query Frame = 1
Query:    1 FVINIKAGVYEETVRVPFEKKNVVFLGDGMGKTVITGSLNVGQQGVSTYESATVGVLGDGFMASGLTIQNTAGPDAHQAVAFRSDSDLSIIENCEFLGNQDTLYAHSLRQFYKKCRIQGNVDFIFGNSPSIFHDCEILVAPRQLKPEKGENNAVTAHGRTDPAQWSGFVF 510
            FV++IKAG+Y+E V+V     ++VF+GDG  KT+I+G+ N  + G++TY +ATV ++G+ F+A  +  +NTAG   HQAVA R  SD SI  NC F G QDTLY HS RQF++ C I G +DF+FG++ ++F +C +LV     KP   +   +TAHGR DP + +GFVF
Sbjct:  284 FVVHIKAGLYKEYVQVNKTMSHLVFIGDGPDKTIISGNKNY-KDGITTYRTATVAIVGNYFIAKNIGFENTAGAIKHQAVAVRVQSDESIFFNCRFDGYQDTLYTHSHRQFFRDCTISGTIDFLFGDAAAVFQNCTLLVR----KPLPNQACPITAHGRKDPRESTGFVF 448          
BLAST of CK739929 vs. ExPASy Swiss-Prot
Match: PME38_ARATH (Putative pectinesterase/pectinesterase inhibitor 38 OS=Arabidopsis thaliana GN=PME38 PE=2 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 9.971e-40
Identity = 83/169 (49.11%), Postives = 111/169 (65.68%), Query Frame = 1
Query:    1 FVINIKAGVYEETVRVPFEKKNVVFLGDGMGKTVITGSLNVGQQGVSTYESATVGVLGDGFMASGLTIQNTAGPDAHQAVAFRSDSDLSIIENCEFLGNQDTLYAHSLRQFYKKCRIQGNVDFIFGNSPSIFHDCEILVAPRQLKPEKGENNAVTAHGRTDPAQWSGFV 507
            +VI++K GVYEE V V  +  N++  GDG+GKT+ITG  + G+ G STY+SAT    GDGF+   +TI+NTAGP+ HQAVA RS+SD+S+   C   G QDTLY HS RQF+++C I G VDFIFGN+ ++  +C I        P  G  N +TA  R +P Q +G V
Sbjct:  195 YVIHVKQGVYEEYVNVGIKSNNIMITGDGIGKTIITGDKSKGR-GFSTYKSATFVAEGDGFVGRDITIRNTAGPENHQAVALRSNSDMSVFYRCSIEGYQDTLYVHSGRQFFRECDIYGTVDFIFGNAAAVLQNCRIFAR----NPPNGV-NTITAQSRFNPNQTTGIV 357          
BLAST of CK739929 vs. ExPASy Swiss-Prot
Match: PME20_ARATH (Probable pectinesterase/pectinesterase inhibitor 20 OS=Arabidopsis thaliana GN=PME20 PE=2 SV=2)

HSP 1 Score: 162.54 bits (410), Expect = 9.971e-40
Identity = 85/167 (50.90%), Postives = 113/167 (67.66%), Query Frame = 1
Query:    1 FVINIKAGVYEETVRVPFEKKNVVFLGDGMGKTVITGSLNVGQQGVSTYESATVGVLGDGFMASGLTIQNTAGPDAHQAVAFRSDSDLSIIENCEFLGNQDTLYAHSLRQFYKKCRIQGNVDFIFGNSPSIFHDCEILVAPRQLKPEKGENNAVTAHGRTDPAQWSG 501
            F+I + AG+YEE V VP  K+ V+ +GDG+ +TVITG+ +V   G +T+ SAT  + G  F+   +TI+NTAGP   QAVA RS  DLS+  +C F   QDTLY HSLRQFY++C + G VDFIFGN+  +  +C +   PRQ  P KG++N VTA GRTDP Q +G
Sbjct:  277 FLIYVTAGLYEEYVEVPKNKRYVMMIGDGINQTVITGNRSV-VDGWTTFNSATFILSGPNFIGVNITIRNTAGPTKGQAVALRSGGDLSVFYSCSFEAYQDTLYTHSLRQFYRECDVYGTVDFIFGNAAVVLQNCNLY--PRQ--PRKGQSNEVTAQGRTDPNQNTG 438          
The following BLAST results are available for this feature:
BLAST of CK739929 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 89
Match NameE-valueIdentityDescription
PME6_ARATH1.065e-4150.00Probable pectinesterase/pectinesterase inhibitor 6... [more]
PME41_ARATH3.100e-4151.50Probable pectinesterase/pectinesterase inhibitor 4... [more]
PME17_ARATH9.019e-4149.70Probable pectinesterase/pectinesterase inhibitor 1... [more]
PME59_ARATH1.538e-4050.90Probable pectinesterase/pectinesterase inhibitor 5... [more]
PME36_ARATH3.427e-4049.40Probable pectinesterase/pectinesterase inhibitor 3... [more]
PME28_ARATH4.476e-4048.52Putative pectinesterase/pectinesterase inhibitor 2... [more]
PMEU1_SOLLC5.846e-4050.89Pectinesterase/pectinesterase inhibitor U1 OS=Sola... [more]
PME21_ARATH7.635e-4047.65Probable pectinesterase/pectinesterase inhibitor 2... [more]
PME38_ARATH9.971e-4049.11Putative pectinesterase/pectinesterase inhibitor 3... [more]
PME20_ARATH9.971e-4050.90Probable pectinesterase/pectinesterase inhibitor 2... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_6751 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE68A10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK739929 ID=CK739929; Name=CK739929; organism=Citrus sinensis; type=EST; length=512bp
TTTGTGATTAACATAAAGGCCGGTGTTTATGAGGAGACCGTTAGGGTTCC
ATTCGAGAAAAAGAACGTGGTGTTTTTAGGCGACGGCATGGGCAAAACGG
TCATTACAGGTTCTTTAAACGTGGGACAGCAAGGGGTTAGCACTTACGAA
TCTGCTACCGTCGGAGTTCTTGGTGATGGGTTCATGGCCAGTGGTCTCAC
AATTCAGAACACGGCAGGTCCTGATGCCCACCAAGCAGTGGCCTTTAGAT
CAGACAGTGATCTCTCCATTATTGAGAACTGTGAATTCTTGGGCAATCAA
GACACTCTATATGCTCATTCCCTTCGGCAATTCTACAAAAAGTGCCGCAT
TCAGGGCAATGTGGACTTCATTTTCGGAAACTCACCGTCAATCTTCCATG
ATTGCGAGATCTTGGTTGCTCCGCGGCAATTAAAGCCGGAGAAAGGTGAG
AACAATGCAGTGACTGCTCATGGCAGAACGGACCCTGCTCAATGGTCAGG
TTTCGTTTTCCA
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