CK739929

Overview
NameCK739929
Unique NameCK739929
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length512
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK739929 vs. ExPASy Swiss-Prot
Match: PME44_ARATH (Probable pectinesterase/pectinesterase inhibitor 44 OS=Arabidopsis thaliana GN=PME44 PE=2 SV=2)

HSP 1 Score: 162.155 bits (409), Expect = 1.302e-39
Identity = 88/168 (52.38%), Postives = 112/168 (66.67%), Query Frame = 1
Query:    1 FVINIKAGVYEETVRVPFEKKNVVFLGDGMGKTVITGSLNVGQQGVSTYESATVGVLGDGFMASGLTIQNTAGPDAHQAVAFRSDSDLSIIENCEFLGNQDTLYAHSLRQFYKKCRIQGNVDFIFGNSPSIFHDCEILVAPRQLKPEKGENNAVTAHGRTDPAQWSGF 504
            FVI IK G+Y E V +  +K N+V LGDG+  TVI+G+ +    G +T+ SAT  V G GF+A  +T QNTAGP+ HQAVA RSDSDLS+   C   G QDTLY H++RQFY++C I G VDFIFG+   +F +C+IL A R L  +K   N +TA GR D  Q SGF
Sbjct:  241 FVIYIKKGLYLENVEIKKKKWNIVMLGDGIDVTVISGNRSF-IDGWTTFRSATFAVSGRGFLARDITFQNTAGPEKHQAVALRSDSDLSVFFRCAMRGYQDTLYTHTMRQFYRECTITGTVDFIFGDGTVVFQNCQIL-AKRGLPNQK---NTITAQGRKDVNQPSGF 403          
BLAST of CK739929 vs. ExPASy Swiss-Prot
Match: PME1_FICAW (Pectinesterase/pectinesterase inhibitor OS=Ficus awkeotsang PE=1 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 2.901e-39
Identity = 80/166 (48.19%), Postives = 112/166 (67.47%), Query Frame = 1
Query:    4 VINIKAGVYEETVRVPFEKKNVVFLGDGMGKTVITGSLNVGQQGVSTYESATVGVLGDGFMASGLTIQNTAGPDAHQAVAFRSDSDLSIIENCEFLGNQDTLYAHSLRQFYKKCRIQGNVDFIFGNSPSIFHDCEILVAPRQLKPEKGENNAVTAHGRTDPAQWSG 501
            ++ ++ G+YEE V   ++KKNV+ +G+GM  T+ITGS NV   G +T++SATV  +GDGF+A  +  QNTAGP+ +QAVA R  +D ++I  C     QDTLY H+ RQFY+   I G VDFIFGN+  +F +C ++  PR  K  KG+ N +TA GRTDP Q +G
Sbjct:  262 IVLVRTGIYEENVDFGYQKKNVMLVGEGMDYTIITGSRNV-VDGSTTFDSATVAAVGDGFIAQDICFQNTAGPEKYQAVALRIGADETVINRCRIDAYQDTLYPHNYRQFYRDRNITGTVDFIFGNAAVVFQNCNLI--PR--KQMKGQENTITAQGRTDPNQNTG 422          
BLAST of CK739929 vs. ExPASy Swiss-Prot
Match: PME_ACTDE (Pectinesterase OS=Actinidia deliciosa PE=1 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 4.949e-39
Identity = 81/167 (48.50%), Postives = 108/167 (64.67%), Query Frame = 1
Query:    1 FVINIKAGVYEETVRVPFEKKNVVFLGDGMGKTVITGSLNVGQQGVSTYESATVGVLGDGFMASGLTIQNTAGPDAHQAVAFRSDSDLSIIENCEFLGNQDTLYAHSLRQFYKKCRIQGNVDFIFGNSPSIFHDCEILVAPRQLKPEKGENNAVTAHGRTDPAQWSG 501
            FVI IK G Y E V V  +K N++F+GDG+GKT I G+ +V   G +T+ S+TV V+G GF+A G++ +N AGP  HQAVA RS +D S    C F+G QDTLY HSLRQFY +C + G +DFIFGN+ ++   C +       KP + + N  TA GR DP Q +G
Sbjct:   38 FVIYIKEGAYFEYVDVDKKKTNLMFIGDGIGKTWIKGNRSV-VDGWTTFRSSTVAVVGTGFIARGISFENYAGPSKHQAVALRSGADFSAFYQCSFVGYQDTLYVHSLRQFYSECDVYGTIDFIFGNAAAVLQKCNLYAR----KPNENQKNIFTAQGRDDPNQNTG 199          
BLAST of CK739929 vs. ExPASy Swiss-Prot
Match: PME21_SOLLC (Pectinesterase 2.1 OS=Solanum lycopersicum GN=PME2.1 PE=2 SV=2)

HSP 1 Score: 160.229 bits (404), Expect = 4.949e-39
Identity = 82/167 (49.10%), Postives = 107/167 (64.07%), Query Frame = 1
Query:    1 FVINIKAGVYEETVRVPFEKKNVVFLGDGMGKTVITGSLNVGQQGVSTYESATVGVLGDGFMASGLTIQNTAGPDAHQAVAFRSDSDLSIIENCEFLGNQDTLYAHSLRQFYKKCRIQGNVDFIFGNSPSIFHDCEILVAPRQLKPEKGENNAVTAHGRTDPAQWSG 501
            +VI +K G Y+E V V   K N++ +GDGM  T+ITGSLNV   G +T+ SAT+  +G GF+   + IQNTAGP  HQAVA R  +D S+I  C     QDTLYAHS RQFY+   + G +DFIFGN+  +F  C+++      KP K + N VTA GRTDP Q +G
Sbjct:  266 YVIYVKRGTYKENVEVSSRKMNLMIIGDGMYATIITGSLNV-VDGSTTFHSATLAAVGKGFILQDICIQNTAGPAKHQAVALRVGADKSVINRCRIDAYQDTLYAHSQRQFYRDSYVTGTIDFIFGNAAVVFQKCQLVAR----KPGKYQQNMVTAQGRTDPNQATG 427          
BLAST of CK739929 vs. ExPASy Swiss-Prot
Match: PME_PRUPE (Pectinesterase/pectinesterase inhibitor PPE8B OS=Prunus persica PE=2 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 6.463e-39
Identity = 79/167 (47.31%), Postives = 111/167 (66.47%), Query Frame = 1
Query:    1 FVINIKAGVYEETVRVPFEKKNVVFLGDGMGKTVITGSLNVGQQGVSTYESATVGVLGDGFMASGLTIQNTAGPDAHQAVAFRSDSDLSIIENCEFLGNQDTLYAHSLRQFYKKCRIQGNVDFIFGNSPSIFHDCEILVAPRQLKPEKGENNAVTAHGRTDPAQWSG 501
            +VI IK G Y+E V +  +K N++ +GDGM  T+I+G+ +    G +T+ SAT  V G GF+A  +T +NTAGP+ HQAVA RSDSDLS+   C   G QDTLY H++RQFY+ C+I G VDFIFG++  +F +C+IL      K    + N++TA GR DP + +G
Sbjct:  237 YVIYIKRGTYKENVEIKKKKWNLMMIGDGMDATIISGNRSF-VDGWTTFRSATFAVSGRGFIARDITFENTAGPEKHQAVALRSDSDLSVFYRCNIRGYQDTLYTHTMRQFYRDCKISGTVDFIFGDATVVFQNCQILAK----KGLPNQKNSITAQGRKDPNEPTG 398          
BLAST of CK739929 vs. ExPASy Swiss-Prot
Match: PME32_ARATH (Probable pectinesterase/pectinesterase inhibitor 32 OS=Arabidopsis thaliana GN=PME32 PE=2 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 6.463e-39
Identity = 81/171 (47.37%), Postives = 115/171 (67.25%), Query Frame = 1
Query:    1 FVINIKAGVYEETVRVPFEKKNVVFLGDGMGKTVITGSLNVGQQGVSTYESATVGVLGDGFMASGLTIQNTAGPDAHQAVAFRSDSDLSIIENCEFLGNQDTLYAHSLRQFYKKCRIQGNVDFIFGNSPSIFHDCEILVAPRQLKPEKG---ENNAVTAHGRTDPAQWSGF 504
            +VI++K GVY E V +  +K N++ +GDG+  TVITG+ +    G +T+ SAT  V G GF+A  +T QNTAGP+ HQAVA RSD+DL +   C   G QDTLYAHS+RQF+++C I G VDFIFG++ ++F  C       Q+K ++G   + N++TA GR DP + +GF
Sbjct:  243 YVIHVKRGVYVENVEIKKKKWNIMMVGDGIDATVITGNRSF-IDGWTTFRSATFAVSGRGFIARDITFQNTAGPEKHQAVAIRSDTDLGVFYRCAMRGYQDTLYAHSMRQFFRECIITGTVDFIFGDATAVFQSC-------QIKAKQGLPNQKNSITAQGRKDPNEPTGF 405          
BLAST of CK739929 vs. ExPASy Swiss-Prot
Match: PME23_ARATH (Probable pectinesterase/pectinesterase inhibitor 23 OS=Arabidopsis thaliana GN=PME23 PE=2 SV=3)

HSP 1 Score: 159.073 bits (401), Expect = 1.102e-38
Identity = 79/169 (46.75%), Postives = 112/169 (66.27%), Query Frame = 1
Query:    1 FVINIKAGVYEETVRVPFEKKNVVFLGDGMGKTVITGSLNVGQQGVSTYESATVGVLGDGFMASGLTIQNTAGPDAHQAVAFRSDSDLSIIENCEFLGNQDTLYAHSLRQFYKKCRIQGNVDFIFGNSPSIFHDCEILVAPRQLKPEKGENNAVTAHGRTDPAQWSGFV 507
            F+I+IK G+Y+E V V  +  +V F+GDG  KT+ITGSLN G   V T+ +AT+ + GD F A  + I+NTAGP+  QAVA R  +D ++  +C+  G+QDTLY HS RQFY+ C + G VDFIFG++  I  +C+I+V     KP KG+   VTA GR++  + +G V
Sbjct:  286 FIIHIKEGIYKEKVTVTKKMPHVTFIGDGPNKTLITGSLNFGIGKVKTFLTATITIEGDHFTAKNIGIENTAGPEGGQAVALRVSADYAVFHSCQIDGHQDTLYVHSHRQFYRDCTVSGTVDFIFGDAKCILQNCKIVVR----KPNKGQTCMVTAQGRSNVRESTGLV 450          
BLAST of CK739929 vs. ExPASy Swiss-Prot
Match: PME18_ARATH (Pectinesterase/pectinesterase inhibitor 18 OS=Arabidopsis thaliana GN=PME18 PE=1 SV=2)

HSP 1 Score: 159.073 bits (401), Expect = 1.102e-38
Identity = 82/164 (50.00%), Postives = 106/164 (64.63%), Query Frame = 1
Query:    1 FVINIKAGVYEETVRVPFEKKNVVFLGDGMGKTVITGSLNVGQQGVSTYESATVGVLGDGFMASGLTIQNTAGPDAHQAVAFRSDSDLSIIENCEFLGNQDTLYAHSLRQFYKKCRIQGNVDFIFGNSPSIFHDCEILVAPRQLKPEKGENNAVTAHGRTDPAQ 492
            +VI +K GVY+ET+ +  +KKN++ +GDG   T+ITGSLNV   G +T+ SATV   GDGFMA  +  QNTAGP  HQAVA R  +D ++I  C     QDTLY H+LRQFY+   I G VDFIFGNS  +F +C+I+       P  G+ N +TA GR D  Q
Sbjct:  275 YVIYVKKGVYKETIDIGKKKKNLMLVGDGKDATIITGSLNV-IDGSTTFRSATVAANGDGFMAQDIWFQNTAGPAKHQAVALRVSADQTVINRCRIDAYQDTLYTHTLRQFYRDSYITGTVDFIFGNSAVVFQNCDIVAR----NPGAGQKNMLTAQGREDQNQ 433          
BLAST of CK739929 vs. ExPASy Swiss-Prot
Match: PME60_ARATH (Probable pectinesterase/pectinesterase inhibitor 60 OS=Arabidopsis thaliana GN=PME60 PE=2 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 1.440e-38
Identity = 86/167 (51.50%), Postives = 108/167 (64.67%), Query Frame = 1
Query:    1 FVINIKAGVYEETVRVPFEKKNVVFLGDGMGKTVITGSLNVGQQGVSTYESATVGVLGDGFMASGLTIQNTAGPDAHQAVAFRSDSDLSIIENCEFLGNQDTLYAHSLRQFYKKCRIQGNVDFIFGNSPSIFHDCEILVAPRQLKPEKGENNAVTAHGRTDPAQWSG 501
            FVI +K G+Y+E + V     N++ +GDGM  T+ITG  +V + G +TY SAT G+ G  F+A G+  QNTAGP   QAVA RS SDLSI   C   G QDTL  HS RQFY++C I G VDFIFGN+  +F +C IL  PR   P KG+ N +TA GRTD  Q +G
Sbjct:  256 FVIYVKRGIYQENLNVRLNNDNIMLVGDGMRYTIITGGRSV-KGGYTTYSSATAGIEGLHFIAKGIAFQNTAGPAKGQAVALRSSSDLSIFYRCSIEGYQDTLMVHSQRQFYRECYIYGTVDFIFGNAAVVFQNCIIL--PR--LPLKGQANVITAQGRTDLFQNTG 417          
BLAST of CK739929 vs. ExPASy Swiss-Prot
Match: PME3_SOLLC (Pectinesterase 3 OS=Solanum lycopersicum GN=PME3 PE=3 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 1.440e-38
Identity = 82/167 (49.10%), Postives = 108/167 (64.67%), Query Frame = 1
Query:    1 FVINIKAGVYEETVRVPFEKKNVVFLGDGMGKTVITGSLNVGQQGVSTYESATVGVLGDGFMASGLTIQNTAGPDAHQAVAFRSDSDLSIIENCEFLGNQDTLYAHSLRQFYKKCRIQGNVDFIFGNSPSIFHDCEILVAPRQLKPEKGENNAVTAHGRTDPAQWSG 501
            +VI +K G+Y+E V V  +K N++ +GDGM  T+ITGSLNV     ST+ S T+  +G GF+   + IQNTAGP+  QAVA R  +D+S+I  C     QDTLYAHS RQFY+   + G VDFIFGN+  +F  C+I+      KP K + N VTA GRTDP Q +G
Sbjct:  261 YVIYVKMGIYKENVVVTKKKMNLMIVGDGMNATIITGSLNVVDG--STFPSNTLAAVGQGFILQDICIQNTAGPEKDQAVALRVGADMSVINRCRIDAYQDTLYAHSQRQFYRDSYVTGTVDFIFGNAAVVFQKCQIVAR----KPNKRQKNMVTAQGRTDPNQATG 421          
The following BLAST results are available for this feature:
BLAST of CK739929 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 89
Match NameE-valueIdentityDescription
PME44_ARATH1.302e-3952.38Probable pectinesterase/pectinesterase inhibitor 4... [more]
PME1_FICAW2.901e-3948.19Pectinesterase/pectinesterase inhibitor OS=Ficus a... [more]
PME_ACTDE4.949e-3948.50Pectinesterase OS=Actinidia deliciosa PE=1 SV=1[more]
PME21_SOLLC4.949e-3949.10Pectinesterase 2.1 OS=Solanum lycopersicum GN=PME2... [more]
PME_PRUPE6.463e-3947.31Pectinesterase/pectinesterase inhibitor PPE8B OS=P... [more]
PME32_ARATH6.463e-3947.37Probable pectinesterase/pectinesterase inhibitor 3... [more]
PME23_ARATH1.102e-3846.75Probable pectinesterase/pectinesterase inhibitor 2... [more]
PME18_ARATH1.102e-3850.00Pectinesterase/pectinesterase inhibitor 18 OS=Arab... [more]
PME60_ARATH1.440e-3851.50Probable pectinesterase/pectinesterase inhibitor 6... [more]
PME3_SOLLC1.440e-3849.10Pectinesterase 3 OS=Solanum lycopersicum GN=PME3 P... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_6751 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE68A10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK739929 ID=CK739929; Name=CK739929; organism=Citrus sinensis; type=EST; length=512bp
TTTGTGATTAACATAAAGGCCGGTGTTTATGAGGAGACCGTTAGGGTTCC
ATTCGAGAAAAAGAACGTGGTGTTTTTAGGCGACGGCATGGGCAAAACGG
TCATTACAGGTTCTTTAAACGTGGGACAGCAAGGGGTTAGCACTTACGAA
TCTGCTACCGTCGGAGTTCTTGGTGATGGGTTCATGGCCAGTGGTCTCAC
AATTCAGAACACGGCAGGTCCTGATGCCCACCAAGCAGTGGCCTTTAGAT
CAGACAGTGATCTCTCCATTATTGAGAACTGTGAATTCTTGGGCAATCAA
GACACTCTATATGCTCATTCCCTTCGGCAATTCTACAAAAAGTGCCGCAT
TCAGGGCAATGTGGACTTCATTTTCGGAAACTCACCGTCAATCTTCCATG
ATTGCGAGATCTTGGTTGCTCCGCGGCAATTAAAGCCGGAGAAAGGTGAG
AACAATGCAGTGACTGCTCATGGCAGAACGGACCCTGCTCAATGGTCAGG
TTTCGTTTTCCA
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