CK739929

Overview
NameCK739929
Unique NameCK739929
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length512
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK739929 vs. ExPASy Swiss-Prot
Match: PME7_ARATH (Probable pectinesterase/pectinesterase inhibitor 7 OS=Arabidopsis thaliana GN=PME7 PE=2 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 2.456e-38
Identity = 79/167 (47.31%), Postives = 112/167 (67.07%), Query Frame = 1
Query:    1 FVINIKAGVYEETVRVPFEKKNVVFLGDGMGKTVITGSLNVGQQGVSTYESATVGVLGDGFMASGLTIQNTAGPDAHQAVAFRSDSDLSIIENCEFLGNQDTLYAHSLRQFYKKCRIQGNVDFIFGNSPSIFHDCEILVAPRQLKPEKGENNAVTAHGRTDPAQWSG 501
            F+I + AG+YEE + +   K+ ++ +GDG+ +TV+TG+ +V   G +T+ SAT  V    F+A  +T +NTAGP+ HQAVA RS +D SI  +C F   QDTLY HSLRQFY++C + G VDFIFGN+  +F +C +   PR  KP   + NA+TA GR+DP Q +G
Sbjct:  296 FLIYVTAGIYEEYISIAKNKRYMMMIGDGINQTVVTGNRSV-VDGWTTFNSATFAVTAPNFVAVNITFRNTAGPEKHQAVALRSGADFSIFYSCSFEAYQDTLYTHSLRQFYRECDVYGTVDFIFGNAAVVFQNCNLY--PR--KPMPNQFNAITAQGRSDPNQNTG 457          
BLAST of CK739929 vs. ExPASy Swiss-Prot
Match: PME22_SOLLC (Pectinesterase 2.2 OS=Solanum lycopersicum GN=PME2.2 PE=3 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 3.208e-38
Identity = 80/167 (47.90%), Postives = 107/167 (64.07%), Query Frame = 1
Query:    1 FVINIKAGVYEETVRVPFEKKNVVFLGDGMGKTVITGSLNVGQQGVSTYESATVGVLGDGFMASGLTIQNTAGPDAHQAVAFRSDSDLSIIENCEFLGNQDTLYAHSLRQFYKKCRIQGNVDFIFGNSPSIFHDCEILVAPRQLKPEKGENNAVTAHGRTDPAQWSG 501
            +VI +K G+Y+E V V   K  ++ +GDGM  T+ITG+LNV   G +T+ SAT+  +G GF+   + IQNTAGP  HQAVA R  +D S+I  C     QDTLYAHS RQFY+   + G +DFIFGN+  +F  C+++      KP K + N VTA GRTDP Q +G
Sbjct:  266 YVIYVKRGIYKENVEVSSRKMKLMIVGDGMHATIITGNLNV-VDGSTTFHSATLAAVGKGFILQDICIQNTAGPAKHQAVALRVGADKSVINRCRIDAYQDTLYAHSQRQFYRDSYVTGTIDFIFGNAAVVFQKCKLVAR----KPGKYQQNMVTAQGRTDPNQATG 427          
BLAST of CK739929 vs. ExPASy Swiss-Prot
Match: PME1_SOLLC (Pectinesterase 1 OS=Solanum lycopersicum GN=PME1.9 PE=1 SV=5)

HSP 1 Score: 157.532 bits (397), Expect = 3.208e-38
Identity = 82/167 (49.10%), Postives = 106/167 (63.47%), Query Frame = 1
Query:    1 FVINIKAGVYEETVRVPFEKKNVVFLGDGMGKTVITGSLNVGQQGVSTYESATVGVLGDGFMASGLTIQNTAGPDAHQAVAFRSDSDLSIIENCEFLGNQDTLYAHSLRQFYKKCRIQGNVDFIFGNSPSIFHDCEILVAPRQLKPEKGENNAVTAHGRTDPAQWSG 501
            +VI +K G Y+E V V   K N++ +GDGM  T ITGSLNV   G +T+ SAT+  +G GF+   + IQNTAGP   QAVA R  +D+S+I  C     QDTLYAHS RQFY+   + G VDFIFGN+  +F  C+++      KP K + N VTA GRTDP Q +G
Sbjct:  262 YVIYVKRGTYKENVEVASNKMNLMIVGDGMYATTITGSLNV-VDGSTTFRSATLAAVGQGFILQDICIQNTAGPAKDQAVALRVGADMSVINRCRIDAYQDTLYAHSQRQFYRDSYVTGTVDFIFGNAAVVFQKCQLVAR----KPGKYQQNMVTAQGRTDPNQATG 423          
BLAST of CK739929 vs. ExPASy Swiss-Prot
Match: PME22_ARATH (Putative pectinesterase/pectinesterase inhibitor 22 OS=Arabidopsis thaliana GN=PME22 PE=3 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 4.189e-38
Identity = 80/169 (47.34%), Postives = 108/169 (63.91%), Query Frame = 1
Query:    1 FVINIKAGVYEETVRVPFEKKNVVFLGDGMGKTVITGSLNVGQQGVSTYESATVGVLGDGFMASGLTIQNTAGPDAHQAVAFRSDSDLSIIENCEFLGNQDTLYAHSLRQFYKKCRIQGNVDFIFGNSPSIFHDCEILVAPRQLKPEKGENNAVTAHGRTDPAQWSGFV 507
            +VI +K GVY+E + +  +K N++ +GDG+G+T+ITG  N   QG++T+ +ATV V G GF+A  +T +NTAGP   QAVA R DSD S    C   G QDTLYAHSLRQFY+ C I G +DFIFGN  ++  +C+I        P   +   +TA GR  P Q +GFV
Sbjct:  269 YVIYVKKGVYKENIDLKKKKTNIMLVGDGIGQTIITGDRNF-MQGLTTFRTATVAVSGRGFIAKDITFRNTAGPQNRQAVALRVDSDQSAFYRCSVEGYQDTLYAHSLRQFYRDCEIYGTIDFIFGNGAAVLQNCKIYTR----VPLPLQKVTITAQGRKSPNQNTGFV 432          
BLAST of CK739929 vs. ExPASy Swiss-Prot
Match: PME_PETIN (Pectinesterase OS=Petunia integrifolia GN=PPE1 PE=2 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 5.471e-38
Identity = 80/169 (47.34%), Postives = 110/169 (65.09%), Query Frame = 1
Query:    1 FVINIKAGVYEETVRVPFEKKNVVFLGDGMGKTVITGSLNVGQQGVSTYESATVGVLGDGFMASGLTIQNTAGPDAHQAVAFRSDSDLSIIENCEFLGNQDTLYAHSLRQFYKKCRIQGNVDFIFGNSPSIFHDCEILVAPRQLKPEKGENNAVTAHGRTDPAQWSGFV 507
            F+I IKAGVY+E + +P    NVV +G+G  KT ITG+ +V + G ST+ + TVGV G  F+A  +  +NTAGP+  QAVA R  +D +II NC+  G QDTLY H+ RQFY+ C I G VDFIFGN  ++  +C+++V     KP + ++  VTA GRT+P Q    V
Sbjct:   87 FIIFIKAGVYKEYIDIPKSMTNVVLIGEGPTKTKITGNKSV-KDGPSTFHTTTVGVNGANFVAKNIGFENTAGPEKEQAVALRVSADKAIIYNCQIDGYQDTLYVHTYRQFYRDCTITGTVDFIFGNGEAVLQNCKVIVR----KPAQNQSCMVTAQGRTEPIQKGAIV 250          
BLAST of CK739929 vs. ExPASy Swiss-Prot
Match: PME16_ARATH (Probable pectinesterase/pectinesterase inhibitor 16 OS=Arabidopsis thaliana GN=PME16 PE=2 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 5.471e-38
Identity = 79/165 (47.88%), Postives = 107/165 (64.85%), Query Frame = 1
Query:    7 INIKAGVYEETVRVPFEKKNVVFLGDGMGKTVITGSLNVGQQGVSTYESATVGVLGDGFMASGLTIQNTAGPDAHQAVAFRSDSDLSIIENCEFLGNQDTLYAHSLRQFYKKCRIQGNVDFIFGNSPSIFHDCEILVAPRQLKPEKGENNAVTAHGRTDPAQWSG 501
            I +KAG Y E + +P ++KNV+ +GDG GKTVI GS +  + G +TY++ATV  +G+GF+A  +T  N AGP + QAVA R  +D S++  C   G QD+LY HS RQFY++  I G VDFIFGNS  +F  C I       KP  G+ N VTA GR++P Q +G
Sbjct:  245 IYLKAGTYHENINIPTKQKNVMLVGDGKGKTVIVGSRS-NRGGWTTYKTATVAAMGEGFIARDMTFVNNAGPKSEQAVALRVGADKSVVHRCSVEGYQDSLYTHSKRQFYRETDITGTVDFIFGNSAVVFQSCNIAAR----KPLPGQRNFVTAQGRSNPGQNTG 404          
BLAST of CK739929 vs. ExPASy Swiss-Prot
Match: PME46_ARATH (Probable pectinesterase/pectinesterase inhibitor 46 OS=Arabidopsis thaliana GN=PME46 PE=2 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 7.146e-38
Identity = 84/166 (50.60%), Postives = 104/166 (62.65%), Query Frame = 1
Query:    4 VINIKAGVYEETVRVPFEKKNVVFLGDGMGKTVITGSLNVGQQGVSTYESATVGVLGDGFMASGLTIQNTAGPDAHQAVAFRSDSDLSIIENCEFLGNQDTLYAHSLRQFYKKCRIQGNVDFIFGNSPSIFHDCEILVAPRQLKPEKGENNAVTAHGRTDPAQWSG 501
            +I +K GVY E VRV   K NVV +GDG  KT+++  LN    G  T+E+AT  V G GFMA  +   NTAGP  HQAVA    +DLS+   C     QDT+YAH+ RQFY+ C I G VDFIFGN+  +F  CEIL  PR  +P KG+ N +TA GR DP Q +G
Sbjct:  287 IIYVKKGVYLENVRVEKTKWNVVMVGDGQSKTIVSAGLNF-IDGTPTFETATFAVFGKGFMARDMGFINTAGPAKHQAVALMVSADLSVFYKCTMDAFQDTMYAHAQRQFYRDCVILGTVDFIFGNAAVVFQKCEIL--PR--RPMKGQQNTITAQGRKDPNQNTG 447          
BLAST of CK739929 vs. ExPASy Swiss-Prot
Match: PME58_ARATH (Probable pectinesterase/pectinesterase inhibitor 58 OS=Arabidopsis thaliana GN=PME58 PE=2 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 1.219e-37
Identity = 81/169 (47.93%), Postives = 106/169 (62.72%), Query Frame = 1
Query:    1 FVINIKAGVYEETVRVPFEKKNVVFLGDGMGKTVITGSLNVGQQGVSTYESATVGVLGDGFMASGLTIQNTAGPDAHQAVAFRSDSDLSIIENCEFLGNQDTLYAHSLRQFYKKCRIQGNVDFIFGNSPSIFHDCEILVAPRQLKPEKGENNAVTAHGRTDPAQWSGFV 507
            FVI IK GVY E V V  +  +V F+GDG  KT ITGSLN     V TY +ATV + GD F A  +  +NTAGP+ HQAVA R  +DL++  NC+  G QDTLY HS RQF++ C + G VDFIFG+   +  +C I+V     KP K ++  +TA GR+D  + +G V
Sbjct:  288 FVIYIKQGVYNEKVDVTKKMTHVTFIGDGPTKTKITGSLNYYIGKVKTYLTATVAINGDNFTAKNIGFENTAGPEGHQAVALRVSADLAVFYNCQIDGYQDTLYVHSHRQFFRDCTVSGTVDFIFGDGIVVLQNCNIVVR----KPMKSQSCMITAQGRSDKRESTGLV 452          
BLAST of CK739929 vs. ExPASy Swiss-Prot
Match: PME1_ARATH (Pectinesterase 1 OS=Arabidopsis thaliana GN=PME1 PE=2 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 2.079e-37
Identity = 83/167 (49.70%), Postives = 105/167 (62.87%), Query Frame = 1
Query:    1 FVINIKAGVYEETVRVPFEKKNVVFLGDGMGKTVITGSLNVGQQGVSTYESATVGVLGDGFMASGLTIQNTAGPDAHQAVAFRSDSDLSIIENCEFLGNQDTLYAHSLRQFYKKCRIQGNVDFIFGNSPSIFHDCEILVAPRQLKPEKGENNAVTAHGRTDPAQWSG 501
            FVI +K+G Y E V +   K NV+  GDG GKT+I+GS N    G  TYE+AT  + G GF+   + I NTAG   HQAVAFRS SD S+   C F G QDTLY HS RQFY+ C + G +DFIFG++  +F  C+I+  PRQ  P   + N +TA G+ DP Q SG
Sbjct:  309 FVIYVKSGTYVENVVMDKSKWNVMIYGDGKGKTIISGSKNF-VDGTPTYETATFAIQGKGFIMKDIGIINTAGAAKHQAVAFRSGSDFSVYYQCSFDGFQDTLYPHSNRQFYRDCDVTGTIDFIFGSAAVVFQGCKIM--PRQ--PLSNQFNTITAQGKKDPNQSSG 470          
BLAST of CK739929 vs. ExPASy Swiss-Prot
Match: PME45_ARATH (Putative pectinesterase/pectinesterase inhibitor 45 OS=Arabidopsis thaliana GN=PME45 PE=2 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 4.632e-37
Identity = 78/169 (46.15%), Postives = 111/169 (65.68%), Query Frame = 1
Query:    1 FVINIKAGVYEETVRVPFEKKNVVFLGDGMGKTVITGSLNVGQQGVSTYESATVGVLGDGFMASGLTIQNTAGPDAHQAVAFRSDSDLSIIENCEFLGNQDTLYAHSLRQFYKKCRIQGNVDFIFGNSPSIFHDCEILVAPRQLKPEKGENNAVTAHGRTDPAQWSGFV 507
            + I IK G+Y+E+V +  +K NV  +GDG  KT++TG+ +  ++ + T+ +AT    G+GFMA  +  +NTAGP+ HQAVA R  SD S+  NC F G QDTLYA++ RQ+Y+ C I G VDFIFG++ +IF +C+I +     K   G+ N VTA GR D  Q +GFV
Sbjct:  325 YTIYIKHGIYDESVIIDKKKPNVTMVGDGSQKTIVTGNKSHAKK-IRTFLTATFVAQGEGFMAQSMGFRNTAGPEGHQAVAIRVQSDRSVFLNCRFEGYQDTLYAYTHRQYYRSCVIIGTVDFIFGDAAAIFQNCDIFIR----KGLPGQKNTVTAQGRVDKFQTTGFV 488          
The following BLAST results are available for this feature:
BLAST of CK739929 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 89
Match NameE-valueIdentityDescription
PME7_ARATH2.456e-3847.31Probable pectinesterase/pectinesterase inhibitor 7... [more]
PME22_SOLLC3.208e-3847.90Pectinesterase 2.2 OS=Solanum lycopersicum GN=PME2... [more]
PME1_SOLLC3.208e-3849.10Pectinesterase 1 OS=Solanum lycopersicum GN=PME1.9... [more]
PME22_ARATH4.189e-3847.34Putative pectinesterase/pectinesterase inhibitor 2... [more]
PME_PETIN5.471e-3847.34Pectinesterase OS=Petunia integrifolia GN=PPE1 PE=... [more]
PME16_ARATH5.471e-3847.88Probable pectinesterase/pectinesterase inhibitor 1... [more]
PME46_ARATH7.146e-3850.60Probable pectinesterase/pectinesterase inhibitor 4... [more]
PME58_ARATH1.219e-3747.93Probable pectinesterase/pectinesterase inhibitor 5... [more]
PME1_ARATH2.079e-3749.70Pectinesterase 1 OS=Arabidopsis thaliana GN=PME1 P... [more]
PME45_ARATH4.632e-3746.15Putative pectinesterase/pectinesterase inhibitor 4... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_6751 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE68A10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK739929 ID=CK739929; Name=CK739929; organism=Citrus sinensis; type=EST; length=512bp
TTTGTGATTAACATAAAGGCCGGTGTTTATGAGGAGACCGTTAGGGTTCC
ATTCGAGAAAAAGAACGTGGTGTTTTTAGGCGACGGCATGGGCAAAACGG
TCATTACAGGTTCTTTAAACGTGGGACAGCAAGGGGTTAGCACTTACGAA
TCTGCTACCGTCGGAGTTCTTGGTGATGGGTTCATGGCCAGTGGTCTCAC
AATTCAGAACACGGCAGGTCCTGATGCCCACCAAGCAGTGGCCTTTAGAT
CAGACAGTGATCTCTCCATTATTGAGAACTGTGAATTCTTGGGCAATCAA
GACACTCTATATGCTCATTCCCTTCGGCAATTCTACAAAAAGTGCCGCAT
TCAGGGCAATGTGGACTTCATTTTCGGAAACTCACCGTCAATCTTCCATG
ATTGCGAGATCTTGGTTGCTCCGCGGCAATTAAAGCCGGAGAAAGGTGAG
AACAATGCAGTGACTGCTCATGGCAGAACGGACCCTGCTCAATGGTCAGG
TTTCGTTTTCCA
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