CK739929

Overview
NameCK739929
Unique NameCK739929
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length512
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK739929 vs. ExPASy Swiss-Prot
Match: PME24_ARATH (Putative pectinesterase/pectinesterase inhibitor 24 OS=Arabidopsis thaliana GN=PME24 PE=3 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 1.348e-36
Identity = 80/166 (48.19%), Postives = 104/166 (62.65%), Query Frame = 1
Query:    4 VINIKAGVYEETVRVPFEKKNVVFLGDGMGKTVITGSLNVGQQGVSTYESATVGVLGDGFMASGLTIQNTAGPDAHQAVAFRSDSDLSIIENCEFLGNQDTLYAHSLRQFYKKCRIQGNVDFIFGNSPSIFHDCEILVAPRQLKPEKGENNAVTAHGRTDPAQWSG 501
            +I +K GVY E V+V  +  NV+ +GDG  K++++G LNV   G  T+++AT  V G GFMA  +   NTAGP  HQAVA    +DL+    C     QDTLY H+ RQFY++C I G VDFIFGNS S+   C IL  PR  +P KG+ N +TA GRTDP   +G
Sbjct:  285 IIYVKKGVYFENVKVEKKMWNVIVVGDGESKSIVSGRLNV-IDGTPTFKTATFAVFGKGFMARDMGFINTAGPSKHQAVALMVSADLTAFYRCTMNAYQDTLYVHAQRQFYRECTIIGTVDFIFGNSASVLQSCRIL--PR--RPMKGQQNTITAQGRTDPNMNTG 445          
BLAST of CK739929 vs. ExPASy Swiss-Prot
Match: PME43_ARATH (Putative pectinesterase/pectinesterase inhibitor 43 OS=Arabidopsis thaliana GN=PME43 PE=2 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 1.760e-36
Identity = 76/169 (44.97%), Postives = 107/169 (63.31%), Query Frame = 1
Query:    1 FVINIKAGVYEETVRVPFEKKNVVFLGDGMGKTVITGSLNVGQQGVSTYESATVGVLGDGFMASGLTIQNTAGPDAHQAVAFRSDSDLSIIENCEFLGNQDTLYAHSLRQFYKKCRIQGNVDFIFGNSPSIFHDCEILVAPRQLKPEKGENNAVTAHGRTDPAQWSGFV 507
            FVI+IK GVY+E V V  +  +V+F+GDG  KTVITG +      V TY +A+V V GD FMA  +  +NTAG   HQAVA R  +D ++  NC   G QDTLY H+ RQFY+ CR+ G +DF+FG++ ++F +CE ++     +P + +   VTA GR D  + +G V
Sbjct:  420 FVIHIKEGVYKEKVEVTKKMLHVMFVGDGPTKTVITGDIAFLPDQVGTYRTASVAVNGDYFMAKDIGFENTAGAARHQAVALRVSADFAVFFNCHMNGYQDTLYVHTHRQFYRNCRVSGTIDFVFGDAKAVFQNCEFVIR----RPMEHQQCIVTAQGRKDRRETTGIV 584          
BLAST of CK739929 vs. ExPASy Swiss-Prot
Match: PME35_ARATH (Probable pectinesterase/pectinesterase inhibitor 35 OS=Arabidopsis thaliana GN=PME35 PE=2 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 1.760e-36
Identity = 78/166 (46.99%), Postives = 109/166 (65.66%), Query Frame = 1
Query:    4 VINIKAGVYEETVRVPFEKKNVVFLGDGMGKTVITGSLNVGQQGVSTYESATVGVLGDGFMASGLTIQNTAGPDAHQAVAFRSDSDLSIIENCEFLGNQDTLYAHSLRQFYKKCRIQGNVDFIFGNSPSIFHDCEILVAPRQLKPEKGENNAVTAHGRTDPAQWSG 501
            VI++ AG Y+E + +P ++KNV+ +GDG GKTVI GS +  + G +TY+SATV  +GDGF+A  +T  N+AGP++ QAVA R  SD S++  C   G QD+LY  S RQFY++  I G VDFIFGNS  +F  C ++      +    + N VTA GR+DP Q +G
Sbjct:  257 VIHLTAGTYKENLNIPSKQKNVMLVGDGKGKTVIVGSRS-NRGGWNTYQSATVAAMGDGFIARDITFVNSAGPNSEQAVALRVGSDRSVVYRCSIDGYQDSLYTLSKRQFYRETDITGTVDFIFGNSAVVFQSCNLV-----SRKGSSDQNYVTAQGRSDPNQNTG 416          
BLAST of CK739929 vs. ExPASy Swiss-Prot
Match: PME56_ARATH (Probable pectinesterase 56 OS=Arabidopsis thaliana GN=PME56 PE=2 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 2.299e-36
Identity = 80/170 (47.06%), Postives = 107/170 (62.94%), Query Frame = 1
Query:    1 FVINIKAGVYEETVRVPFEKKNVVFLGDGMGKTVITGSLNVGQQGVSTYESATVGVLGDGFMASGLTIQNTAGPDAHQAVAFRSDSDLSIIENCEFLGNQDTLYAHSLRQFYKKCRIQGNVDFIFGNSPSIFHDCEILVAPRQLKPEKGENNAVTAHGRTDPAQWSGFVF 510
            FVI IK G+Y+E +R+  +K N+  +GDG   TV++G LN G  G+ T++SAT+ V   GFMA  L I+NTAGP+  QAVA R  +D++II  C     QDTLYA+S RQFY+ C I G VDFIFG + ++F  C+I       KP  G+ N +TA  R +    SGF F
Sbjct:   74 FVIYIKEGLYKEVIRIGKKKTNLTLVGDGRDLTVLSGDLN-GVDGIKTFDSATLAVDESGFMAQDLCIRNTAGPEKRQAVALRISTDMTIIYRCRIDAYQDTLYAYSGRQFYRDCYITGTVDFIFGRAAAVFQYCQI----EARKPGIGQTNILTAQSREEDTATSGFSF 238          
BLAST of CK739929 vs. ExPASy Swiss-Prot
Match: PME13_ARATH (Probable pectinesterase/pectinesterase inhibitor 13 OS=Arabidopsis thaliana GN=PME13 PE=2 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 5.121e-36
Identity = 76/169 (44.97%), Postives = 109/169 (64.50%), Query Frame = 1
Query:    1 FVINIKAGVYEETVRVPFEKKNVVFLGDGMGKTVITGSLNVGQQGVSTYESATVGVLGDGFMASGLTIQNTAGPDAHQAVAFRSDSDLSIIENCEFLGNQDTLYAHSLRQFYKKCRIQGNVDFIFGNSPSIFHDCEILVAPRQLKPEKGENNAVTAHGRTDPAQWSGFV 507
            ++I +K G+Y+E V V  +K N+  +GDG  KT++TG+ +  ++ + T+ +AT    G+GFMA  +  +NTAG + HQAVA R  SD SI  NC F G QDTLYA++ RQ+Y+ C I G +DFIFG++ +IF +C I +     K   G+ N VTA GR D  Q +GFV
Sbjct:  330 YIIYVKQGIYDEYVTVDKKKANLTMVGDGSQKTIVTGNKSHAKK-IRTFLTATFVAQGEGFMAQSMGFRNTAGSEGHQAVAIRVQSDRSIFLNCRFEGYQDTLYAYTHRQYYRSCVIVGTIDFIFGDAAAIFQNCNIFIR----KGLPGQKNTVTAQGRVDKFQTTGFV 493          
BLAST of CK739929 vs. ExPASy Swiss-Prot
Match: PME33_ARATH (Probable pectinesterase/pectinesterase inhibitor 33 OS=Arabidopsis thaliana GN=PME33 PE=2 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 1.946e-35
Identity = 81/167 (48.50%), Postives = 104/167 (62.28%), Query Frame = 1
Query:    1 FVINIKAGVYEETVRVPFEKKNVVFLGDGMGKTVITGSLNVGQQGVSTYESATVGVLGDGFMASGLTIQNTAGPDAHQAVAFRSDSDLSIIENCEFLGNQDTLYAHSLRQFYKKCRIQGNVDFIFGNSPSIFHDCEILVAPRQLKPEKGENNAVTAHGRTDPAQWSG 501
            FVI +K GVY E + V  +  N++ +GDG  KT+IT   +V Q G +TY SAT G  G  F+A  +T  NTAGP   QAVA RS SDLS+       G QDTLY HS RQF+++C I G +DFIFGN+  +F +C ILV     +P  G+ N +TA GR DP Q +G
Sbjct:  310 FVIYVKKGVYRENIDVGNDNHNIMLVGDGERKTIITSGRSV-QHGYTTYNSATGGFGGQRFVAKDMTFINTAGPLRGQAVAVRSSSDLSVFYRVGIHGFQDTLYIHSQRQFFRECYISGTIDFIFGNAAVVFQNCMILVR----RPLHGQANIITAQGRGDPFQNTG 471          
BLAST of CK739929 vs. ExPASy Swiss-Prot
Match: PME26_ARATH (Putative pectinesterase/pectinesterase inhibitor 26 OS=Arabidopsis thaliana GN=PME26 PE=2 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 2.542e-35
Identity = 81/167 (48.50%), Postives = 101/167 (60.48%), Query Frame = 1
Query:    1 FVINIKAGVYEETVRVPFEKKNVVFLGDGMGKTVITGSLNVGQQGVSTYESATVGVLGDGFMASGLTIQNTAGPDAHQAVAFRSDSDLSIIENCEFLGNQDTLYAHSLRQFYKKCRIQGNVDFIFGNSPSIFHDCEILVAPRQLKPEKGENNAVTAHGRTDPAQWSG 501
            FVI +KAG Y E V +  +K NV   GDG  KT+I+GS N+   GV T+ ++T    G GFM   + I NTAGP+ HQAVAFRSDSD S+   C F G QDTLY HS RQ+Y+ C + G VDFIFG    +F  C I   PRQ  P   + N +TA G  +  Q +G
Sbjct:  689 FVIYVKAGTYVENVLMKKDKWNVFIYGDGRDKTIISGSTNM-VDGVRTFNTSTFATEGKGFMMKDMGIINTAGPEKHQAVAFRSDSDRSVYYRCSFDGYQDTLYTHSNRQYYRNCDVTGTVDFIFGAGTVVFQGCSI--RPRQ--PLPNQFNTITAEGTQEANQNTG 850          
BLAST of CK739929 vs. ExPASy Swiss-Prot
Match: PME_MEDSA (Pectinesterase/pectinesterase inhibitor OS=Medicago sativa PE=2 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 4.335e-35
Identity = 80/170 (47.06%), Postives = 101/170 (59.41%), Query Frame = 1
Query:    1 FVINIKAGVYEETVRVPFEKKNVVFLGDGMGKTVITGSLNVGQQGVSTYESATVGVLGDGFMASGLTIQNTAGPDAHQAVAFRSDSDLSIIENCEFLGNQDTLYAHSLRQFYKKCRIQGNVDFIFGNSPSIFHDCEILVAPRQLKPEKGENNAVTAHGRTDPAQWSGFVF 510
            FVI++KAGVY+ETV V  E   V  +GDG  KT  TGSLN    G++TY +AT GV G  FMA  +  +NTAG   HQAVA R  +D +I  NC+  G QDTLY  S RQFY+ C I G +DF+FG    +F +C+++       P KG+   VTA GR      S  VF
Sbjct:  160 FVIHVKAGVYKETVNVAKEMNYVTVIGDGPTKTKFTGSLNYAD-GINTYNTATFGVNGANFMAKDIGFENTAGTGKHQAVALRVTADQAIFYNCQMDGFQDTLYVQSQRQFYRDCSISGTIDFVFGERFGVFQNCKLVCR----LPAKGQQCLVTAGGREKQNSASALVF 324          
BLAST of CK739929 vs. ExPASy Swiss-Prot
Match: PME40_ARATH (Probable pectinesterase/pectinesterase inhibitor 40 OS=Arabidopsis thaliana GN=PME40 PE=2 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 3.670e-34
Identity = 74/167 (44.31%), Postives = 102/167 (61.08%), Query Frame = 1
Query:    1 FVINIKAGVYEETVRVPFEKKNVVFLGDGMGKTVITGSLNVGQQGVSTYESATVGVLGDGFMASGLTIQNTAGPDAHQAVAFRSDSDLSIIENCEFLGNQDTLYAHSLRQFYKKCRIQGNVDFIFGNSPSIFHDCEILVAPRQLKPEKGENNAVTAHGRTDPAQWSG 501
            FVI IK G Y E + +P EK  ++F+GDG+G+TVI  + +    G + + SATVGV G GF+A  L+  N AGP+ HQAVA RS SDLS    C F   QDT+Y HS +QFY++C I G VDFIFG++  +F +C +       +P   +    TA GR +  + +G
Sbjct:  236 FVIYIKCGEYFENIEIPREKTMIMFIGDGIGRTVIKANRSYAD-GWTAFHSATVGVRGSGFIAKDLSFVNYAGPEKHQAVALRSSSDLSAYYRCSFESYQDTIYVHSHKQFYRECDIYGTVDFIFGDASVVFQNCSLYAR----RPNPNQKIIYTAQGRENSREPTG 397          
BLAST of CK739929 vs. ExPASy Swiss-Prot
Match: PME12_ARATH (Probable pectinesterase/pectinesterase inhibitor 12 OS=Arabidopsis thaliana GN=PME12 PE=2 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 6.260e-34
Identity = 71/158 (44.94%), Postives = 99/158 (62.66%), Query Frame = 1
Query:    4 VINIKAGVYEETVRVPFEKKNVVFLGDGMGKTVITGSLNVGQQGVSTYESATVGVLGDGFMASGLTIQNTAGPDAHQAVAFRSDSDLSIIENCEFLGNQDTLYAHSLRQFYKKCRIQGNVDFIFGNSPSIFHDCEILVAPRQLKPEKGENNAVTAHGR 477
            +I +K GVY+E + +P  K N+V +GDG   T ITG+ +VG  G +T+ SAT+ V G+GF+A  + I NTAGP+ HQAVA R ++D   +  C   G QDTLY HS RQFY++C I G +D+IFGN+  +F  C I+       P  G+   +TA  R
Sbjct:  267 LIYVKEGVYDENIDIPIYKTNIVLIGDGSDVTFITGNRSVGD-GWTTFRSATLAVSGEGFLARDIMITNTAGPEKHQAVALRVNADFVALYRCVIDGYQDTLYTHSFRQFYRECDIYGTIDYIFGNAAVVFQGCNIV----SKLPMPGQFTVITAQSR 419          
The following BLAST results are available for this feature:
BLAST of CK739929 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 89
Match NameE-valueIdentityDescription
PME24_ARATH1.348e-3648.19Putative pectinesterase/pectinesterase inhibitor 2... [more]
PME43_ARATH1.760e-3644.97Putative pectinesterase/pectinesterase inhibitor 4... [more]
PME35_ARATH1.760e-3646.99Probable pectinesterase/pectinesterase inhibitor 3... [more]
PME56_ARATH2.299e-3647.06Probable pectinesterase 56 OS=Arabidopsis thaliana... [more]
PME13_ARATH5.121e-3644.97Probable pectinesterase/pectinesterase inhibitor 1... [more]
PME33_ARATH1.946e-3548.50Probable pectinesterase/pectinesterase inhibitor 3... [more]
PME26_ARATH2.542e-3548.50Putative pectinesterase/pectinesterase inhibitor 2... [more]
PME_MEDSA4.335e-3547.06Pectinesterase/pectinesterase inhibitor OS=Medicag... [more]
PME40_ARATH3.670e-3444.31Probable pectinesterase/pectinesterase inhibitor 4... [more]
PME12_ARATH6.260e-3444.94Probable pectinesterase/pectinesterase inhibitor 1... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_6751 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE68A10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK739929 ID=CK739929; Name=CK739929; organism=Citrus sinensis; type=EST; length=512bp
TTTGTGATTAACATAAAGGCCGGTGTTTATGAGGAGACCGTTAGGGTTCC
ATTCGAGAAAAAGAACGTGGTGTTTTTAGGCGACGGCATGGGCAAAACGG
TCATTACAGGTTCTTTAAACGTGGGACAGCAAGGGGTTAGCACTTACGAA
TCTGCTACCGTCGGAGTTCTTGGTGATGGGTTCATGGCCAGTGGTCTCAC
AATTCAGAACACGGCAGGTCCTGATGCCCACCAAGCAGTGGCCTTTAGAT
CAGACAGTGATCTCTCCATTATTGAGAACTGTGAATTCTTGGGCAATCAA
GACACTCTATATGCTCATTCCCTTCGGCAATTCTACAAAAAGTGCCGCAT
TCAGGGCAATGTGGACTTCATTTTCGGAAACTCACCGTCAATCTTCCATG
ATTGCGAGATCTTGGTTGCTCCGCGGCAATTAAAGCCGGAGAAAGGTGAG
AACAATGCAGTGACTGCTCATGGCAGAACGGACCCTGCTCAATGGTCAGG
TTTCGTTTTCCA
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