CK739941
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK739941 vs. ExPASy Swiss-Prot
Match: SXL_DROME (Protein sex-lethal OS=Drosophila melanogaster GN=Sxl PE=1 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 5.678e-11 Identity = 42/142 (29.58%), Postives = 74/142 (52.11%), Query Frame = 1 Query: 10 LNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGV 435 L F G + +++R+ +TG GY F++F S ++R ++ NG + N + ++++A G GE DT ++V +L +TD L +T +Y S ++ D+LTGR +G FVR+ E A++ +N V Sbjct: 141 LYALFRAIGPINTCRIMRDYKTGYSFGYAFVDFTSEMDSQRAIKVLNGITVRN--KRLKVSYARPG-GESIKDT---NLYVTNLPRTITDDQL-DTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAISALNNV 275
BLAST of CK739941 vs. ExPASy Swiss-Prot
Match: ROC1_ARATH (Ribonucleoprotein At2g37220, chloroplastic OS=Arabidopsis thaliana GN=At2g37220 PE=1 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 5.678e-11 Identity = 49/170 (28.82%), Postives = 78/170 (45.88%), Query Frame = 1 Query: 22 FAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNG-------------TPMPNGEQNF----RLNWAS----FGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGQ 468 F G V V+VI +K TG+ G+GF+ S + E Q FNG P P E F R ++ S +G G + ++VG+L+ V D L+ F + + A+V+ DR +GR+KG+GFV + E A+ ++G R +R+ + Sbjct: 111 FESAGNVEMVEVIYDKITGRSRGFGFVTMSSVSEVEAAAQQFNGYELDGRPLRVNAGPPPPKREDGFSRGPRSSFGSSGSGYGGGGGSGAGSGNRVYVGNLSWGVDDMALESLFSEQGKVVE-ARVIYDRDSGRSKGFGFVTYDSSQEVQNAIKSLDGADLDGRQIRVSE 279
BLAST of CK739941 vs. ExPASy Swiss-Prot
Match: PABP_ASPOR (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Aspergillus oryzae GN=pab1 PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 5.678e-11 Identity = 46/185 (24.86%), Postives = 89/185 (48.11%), Query Frame = 1 Query: 1 ETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGQLLIRKLFQGQQQYPKASYQNSQVAQSDDD 555 E L F+ G+V +++V R+ T + GY ++ + + A ER L+ N T + + R+ W+ ++ T +F+ +L + + + L +TF A + + KV D G +KGYGFV + A+ +NG+ + + + +G + +K Q + + KA++ N + D D Sbjct: 62 EAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALEDLNYTLIKG--KPCRIMWSQRDPALRK--TGQGNVFIKNLDSAIDNKALHDTFAA-FGNILSCKVAQDEF-GNSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHISKKDRQSKFEEMKANFTNVYIKNIDQD 240
BLAST of CK739941 vs. ExPASy Swiss-Prot
Match: PABP_NEOFI (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=pab1 PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 7.416e-11 Identity = 46/185 (24.86%), Postives = 89/185 (48.11%), Query Frame = 1 Query: 1 ETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGQLLIRKLFQGQQQYPKASYQNSQVAQSDDD 555 E L F+ G+V +++V R+ T + GY ++ + + A ER L+ N T + + R+ W+ ++ T +F+ +L A + + L +TF A + + KV D G +KGYGFV + A+ +NG+ + + + +G + +K Q + + KA++ N + D + Sbjct: 65 EAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALEDLNYTLIKG--KPCRIMWSQRDPALRK--TGQGNVFIKNLDAAIDNKALHDTFAA-FGNILSCKVAQDEF-GNSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHISKKDRQSKFEEMKANFTNVYIKNIDQE 243
BLAST of CK739941 vs. ExPASy Swiss-Prot
Match: PABP_ASPTN (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=pab1 PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 7.416e-11 Identity = 46/185 (24.86%), Postives = 89/185 (48.11%), Query Frame = 1 Query: 1 ETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGQLLIRKLFQGQQQYPKASYQNSQVAQSDDD 555 E L F+ G+V +++V R+ T + GY ++ + + A ER L+ N T + + R+ W+ ++ T +F+ +L A + + L +TF A + + KV D G +KGYGFV + A+ +NG+ + + + +G + +K Q + + KA++ N + D + Sbjct: 61 EAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALEDLNYTLIKG--KPCRIMWSQRDPALRK--TGQGNVFIKNLDAAIDNKALHDTFAA-FGNILSCKVAQDEF-GNSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHISKKDRQSKFEEMKANFTNVYIKNLDQE 239
BLAST of CK739941 vs. ExPASy Swiss-Prot
Match: PABP_ASPFU (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Aspergillus fumigatus GN=pab1 PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 7.416e-11 Identity = 46/185 (24.86%), Postives = 89/185 (48.11%), Query Frame = 1 Query: 1 ETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGQLLIRKLFQGQQQYPKASYQNSQVAQSDDD 555 E L F+ G+V +++V R+ T + GY ++ + + A ER L+ N T + + R+ W+ ++ T +F+ +L A + + L +TF A + + KV D G +KGYGFV + A+ +NG+ + + + +G + +K Q + + KA++ N + D + Sbjct: 65 EAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALEDLNYTLIKG--KPCRIMWSQRDPALRK--TGQGNVFIKNLDAAIDNKALHDTFAA-FGNILSCKVAQDEF-GNSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHISKKDRQSKFEEMKANFTNVYIKNIDQE 243
BLAST of CK739941 vs. ExPASy Swiss-Prot
Match: ELV1B_XENLA (ELAV-like protein 1-B OS=Xenopus laevis GN=elavl1-B PE=1 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 7.416e-11 Identity = 38/141 (26.95%), Postives = 73/141 (51.77%), Query Frame = 1 Query: 10 LNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNG 432 L + F+ GEV + K+IR+K G GYGF+ +++ AER + T NG + + + ++++A + D +++ L +T +++ F + ++V++D+ TG ++G F+RF SE A+ NG Sbjct: 36 LRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYLNAKDAERAINTLNGLRLQS--KTIKVSFAR----PSSETIKDANLYISGLPRTMTQKDVEDMF-LPFGHIINSRVLVDQATGLSRGVAFIRFDKRSEAEEAIASFNG 169
BLAST of CK739941 vs. ExPASy Swiss-Prot
Match: ELAV3_HUMAN (ELAV-like protein 3 OS=Homo sapiens GN=ELAVL3 PE=1 SV=3) HSP 1 Score: 67.0106 bits (162), Expect = 7.416e-11 Identity = 46/197 (23.35%), Postives = 95/197 (48.22%), Query Frame = 1 Query: 22 FAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNG------------VFCSTRPMRIGQLLIRKLFQGQ-QQYPKASYQNSQVAQSDDDPNNTTG 573 F G++ + K++R+K TGQ GYGF+ + A++ + T NG + + ++++A + R D ++V L ++ +++ F ++Y +++++D++TG ++G GF+RF E A+ +NG F + + GQ L+ L+Q ++Y + +Q + D+ N G Sbjct: 59 FGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDADKAINTLNGLKLQT--KTIKVSYARPSSASIR----DANLYVSGLPKTMSQKEMEQLF-SQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGAAEPITVKFANNPSQKTGQALLTHLYQSSARRYAGPLHHQTQRFRLDNLLNMAYG 248 The following BLAST results are available for this feature:
BLAST of CK739941 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 58
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Sequences
The
following sequences are available for this feature:
EST sequence >CK739941 ID=CK739941; Name=CK739941; organism=Citrus sinensis; type=EST; length=574bpback to top |