CK739957

Overview
NameCK739957
Unique NameCK739957
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length205
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CK739957 vs. ExPASy Swiss-Prot
Match: HSP75_DROME (Major heat shock 70 kDa protein Bc OS=Drosophila melanogaster GN=Hsp70Bc PE=2 SV=2)

HSP 1 Score: 108.227 bits (269), Expect = 1.315e-23
Identity = 52/68 (76.47%), Postives = 56/68 (82.35%), Query Frame = 1 
Query:    1 GGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQI 204
            GGVMT LI RN  IP K+ + FSTYSDNQPGV IQVYEGER  T+DNN LG F+LSGIPPAPRGVPQI
Sbjct:  405 GGVMTKLIERNCRIPCKQTKTFSTYSDNQPGVSIQVYEGERAMTKDNNALGTFDLSGIPPAPRGVPQI 472
[Close]
BLAST of CK739957 vs. ExPASy Swiss-Prot
Match: HSP74_DROME (Major heat shock 70 kDa protein Bbb OS=Drosophila melanogaster GN=Hsp70Bbb PE=2 SV=2)

HSP 1 Score: 108.227 bits (269), Expect = 1.315e-23
Identity = 52/68 (76.47%), Postives = 56/68 (82.35%), Query Frame = 1 
Query:    1 GGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQI 204
            GGVMT LI RN  IP K+ + FSTYSDNQPGV IQVYEGER  T+DNN LG F+LSGIPPAPRGVPQI
Sbjct:  405 GGVMTKLIERNCRIPCKQTKTFSTYSDNQPGVSIQVYEGERAMTKDNNALGTFDLSGIPPAPRGVPQI 472
[Close]
BLAST of CK739957 vs. ExPASy Swiss-Prot
Match: HSP73_DROME (Major heat shock 70 kDa protein Bb OS=Drosophila melanogaster GN=Hsp70Bb PE=2 SV=2)

HSP 1 Score: 108.227 bits (269), Expect = 1.315e-23
Identity = 52/68 (76.47%), Postives = 56/68 (82.35%), Query Frame = 1 
Query:    1 GGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQI 204
            GGVMT LI RN  IP K+ + FSTYSDNQPGV IQVYEGER  T+DNN LG F+LSGIPPAPRGVPQI
Sbjct:  405 GGVMTKLIERNCRIPCKQTKTFSTYSDNQPGVSIQVYEGERAMTKDNNALGTFDLSGIPPAPRGVPQI 472
[Close]
BLAST of CK739957 vs. ExPASy Swiss-Prot
Match: HSP72_DROSI (Major heat shock 70 kDa protein Ba OS=Drosophila simulans GN=Hsp70Ba PE=2 SV=2)

HSP 1 Score: 108.227 bits (269), Expect = 1.315e-23
Identity = 52/68 (76.47%), Postives = 56/68 (82.35%), Query Frame = 1 
Query:    1 GGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQI 204
            GGVMT LI RN  IP K+ + FSTYSDNQPGV IQVYEGER  T+DNN LG F+LSGIPPAPRGVPQI
Sbjct:  405 GGVMTKLIERNCRIPCKQTKTFSTYSDNQPGVSIQVYEGERAMTKDNNALGTFDLSGIPPAPRGVPQI 472
[Close]
BLAST of CK739957 vs. ExPASy Swiss-Prot
Match: HSP72_DROME (Major heat shock 70 kDa protein Ba OS=Drosophila melanogaster GN=Hsp70Ba PE=2 SV=2)

HSP 1 Score: 108.227 bits (269), Expect = 1.315e-23
Identity = 52/68 (76.47%), Postives = 56/68 (82.35%), Query Frame = 1 
Query:    1 GGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQI 204
            GGVMT LI RN  IP K+ + FSTYSDNQPGV IQVYEGER  T+DNN LG F+LSGIPPAPRGVPQI
Sbjct:  405 GGVMTKLIERNCRIPCKQTKTFSTYSDNQPGVSIQVYEGERAMTKDNNALGTFDLSGIPPAPRGVPQI 472
[Close]
BLAST of CK739957 vs. ExPASy Swiss-Prot
Match: HSP71_DROSI (Major heat shock 70 kDa protein Ab OS=Drosophila simulans GN=Hsp70Ab PE=2 SV=2)

HSP 1 Score: 108.227 bits (269), Expect = 1.315e-23
Identity = 52/68 (76.47%), Postives = 56/68 (82.35%), Query Frame = 1 
Query:    1 GGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQI 204
            GGVMT LI RN  IP K+ + FSTYSDNQPGV IQVYEGER  T+DNN LG F+LSGIPPAPRGVPQI
Sbjct:  405 GGVMTKLIERNCRIPCKQTKTFSTYSDNQPGVSIQVYEGERAMTKDNNALGTFDLSGIPPAPRGVPQI 472
[Close]
BLAST of CK739957 vs. ExPASy Swiss-Prot
Match: HSP7C_CAEBR (Heat shock 70 kDa protein C OS=Caenorhabditis briggsae GN=hsp-3 PE=3 SV=2)

HSP 1 Score: 107.842 bits (268), Expect = 1.718e-23
Identity = 52/68 (76.47%), Postives = 58/68 (85.29%), Query Frame = 1 
Query:    1 GGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQI 204
            GGVMT LI RNT IPTKK QVFST +DNQP V IQV+EGER  T+DN+ LGKF+L+GIPPAPRGVPQI
Sbjct:  435 GGVMTKLISRNTVIPTKKSQVFSTAADNQPTVTIQVFEGERPMTKDNHQLGKFDLTGIPPAPRGVPQI 502
[Close]
BLAST of CK739957 vs. ExPASy Swiss-Prot
Match: GRP78_SPETR (78 kDa glucose-regulated protein OS=Spermophilus tridecemlineatus GN=HSPA5 PE=2 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 1.718e-23
Identity = 51/68 (75.00%), Postives = 58/68 (85.29%), Query Frame = 1 
Query:    1 GGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQI 204
            GGVMT LIPRNT +PTKK Q+ ST SDNQP V I+VYEGER  T+DN+LLG F+L+GIPPAPRGVPQI
Sbjct:  430 GGVMTKLIPRNTVVPTKKSQISSTASDNQPTVTIKVYEGERPLTKDNHLLGTFDLTGIPPAPRGVPQI 497
[Close]
BLAST of CK739957 vs. ExPASy Swiss-Prot
Match: HSP71_DROME (Major heat shock 70 kDa protein Ab OS=Drosophila melanogaster GN=Hsp70Ab PE=1 SV=3)

HSP 1 Score: 107.071 bits (266), Expect = 2.930e-23
Identity = 51/68 (75.00%), Postives = 56/68 (82.35%), Query Frame = 1 
Query:    1 GGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQI 204
            GGVMT LI RN  IP K+ + FSTY+DNQPGV IQVYEGER  T+DNN LG F+LSGIPPAPRGVPQI
Sbjct:  405 GGVMTKLIERNCRIPCKQTKTFSTYADNQPGVSIQVYEGERAMTKDNNALGTFDLSGIPPAPRGVPQI 472
[Close]
BLAST of CK739957 vs. ExPASy Swiss-Prot
Match: HSP70_DROME (Major heat shock 70 kDa protein Aa OS=Drosophila melanogaster GN=Hsp70Aa PE=2 SV=2)

HSP 1 Score: 107.071 bits (266), Expect = 2.930e-23
Identity = 51/68 (75.00%), Postives = 56/68 (82.35%), Query Frame = 1 
Query:    1 GGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQI 204
            GGVMT LI RN  IP K+ + FSTY+DNQPGV IQVYEGER  T+DNN LG F+LSGIPPAPRGVPQI
Sbjct:  405 GGVMTKLIERNCRIPCKQTKTFSTYADNQPGVSIQVYEGERAMTKDNNALGTFDLSGIPPAPRGVPQI 472
The following BLAST results are available for this feature:
BLAST of CK739957 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HSP75_DROME1.315e-2376.47Major heat shock 70 kDa protein Bc OS=Drosophila m... [more]
HSP74_DROME1.315e-2376.47Major heat shock 70 kDa protein Bbb OS=Drosophila ... [more]
HSP73_DROME1.315e-2376.47Major heat shock 70 kDa protein Bb OS=Drosophila m... [more]
HSP72_DROSI1.315e-2376.47Major heat shock 70 kDa protein Ba OS=Drosophila s... [more]
HSP72_DROME1.315e-2376.47Major heat shock 70 kDa protein Ba OS=Drosophila m... [more]
HSP71_DROSI1.315e-2376.47Major heat shock 70 kDa protein Ab OS=Drosophila s... [more]
HSP7C_CAEBR1.718e-2376.47Heat shock 70 kDa protein C OS=Caenorhabditis brig... [more]
GRP78_SPETR1.718e-2375.0078 kDa glucose-regulated protein OS=Spermophilus t... [more]
HSP71_DROME2.930e-2375.00Major heat shock 70 kDa protein Ab OS=Drosophila m... [more]
HSP70_DROME2.930e-2375.00Major heat shock 70 kDa protein Aa OS=Drosophila m... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_6779 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE68E05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK739957 ID=CK739957; Name=CK739957; organism=Citrus sinensis; type=EST; length=205bp
GGTGGAGTCATGACTGTGTTGATTCCAAGGAACACCACTATTCCAACCAA
GAAGGAGCAGGTGTTCTCCACATACTCTGACAACCAGCCCGGGGTGTTGA
TCCAGGTCTACGAGGGTGAGCGCACAAGAACCCGTGACAACAACTTGCTT
GGAAAGTTTGAGCTCTCTGGCATTCCTCCTGCTCCAAGAGGGGTTCCACA
AATCA
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