CK739957

Overview
NameCK739957
Unique NameCK739957
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length205
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK739957 vs. ExPASy Swiss-Prot
Match: HSP70_SCHMA (Heat shock 70 kDa protein homolog OS=Schistosoma mansoni PE=2 SV=2)

HSP 1 Score: 120.553 bits (301), Expect = 2.561e-27
Identity = 57/68 (83.82%), Postives = 61/68 (89.71%), Query Frame = 1
Query:    1 GGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQI 204
            GGVMT LI RNTTIPTK+ Q F+TYSDNQPGVLIQV+EGER  T+DNNLLGKFELSGIPPAPRG PQI
Sbjct:  405 GGVMTALIKRNTTIPTKQTQTFTTYSDNQPGVLIQVFEGERALTKDNNLLGKFELSGIPPAPRGTPQI 472          
BLAST of CK739957 vs. ExPASy Swiss-Prot
Match: HSP73_PLAFA (Heat shock 70 kDa protein PPF203 (Fragment) OS=Plasmodium falciparum PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 3.345e-27
Identity = 56/68 (82.35%), Postives = 61/68 (89.71%), Query Frame = 1
Query:    1 GGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQI 204
            GGVMT LI RNTTIPTKK Q+F+TY+DNQPGVLIQVYEGER  T+DNNLLGKF+L GIPPAPR VPQI
Sbjct:    7 GGVMTKLIERNTTIPTKKNQIFTTYADNQPGVLIQVYEGERAMTKDNNLLGKFQLEGIPPAPRSVPQI 74          
BLAST of CK739957 vs. ExPASy Swiss-Prot
Match: HSP70_ACHKL (Heat shock 70 kDa protein OS=Achlya klebsiana GN=HSP70 PE=2 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 3.345e-27
Identity = 56/68 (82.35%), Postives = 60/68 (88.24%), Query Frame = 1
Query:    1 GGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQI 204
            GGVMT LI RNTT+PTKK Q FSTY+DNQPGVLIQV+EGER+ TRDNNLLGKF L GIPP PRGVPQI
Sbjct:  410 GGVMTTLIQRNTTVPTKKSQTFSTYADNQPGVLIQVFEGERSMTRDNNLLGKFSLDGIPPMPRGVPQI 477          
BLAST of CK739957 vs. ExPASy Swiss-Prot
Match: HS71L_MACFA (Heat shock 70 kDa protein 1-like OS=Macaca fascicularis GN=HSPA1L PE=2 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 3.345e-27
Identity = 55/68 (80.88%), Postives = 63/68 (92.65%), Query Frame = 1
Query:    1 GGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQI 204
            GGVMT LI RN+TIPTK+ Q+F+TYSDNQPGVLIQVYEGER  T+DNNLLG+F+L+GIPPAPRGVPQI
Sbjct:  409 GGVMTALIKRNSTIPTKQTQIFTTYSDNQPGVLIQVYEGERAMTKDNNLLGRFDLTGIPPAPRGVPQI 476          
BLAST of CK739957 vs. ExPASy Swiss-Prot
Match: HS71L_HUMAN (Heat shock 70 kDa protein 1-like OS=Homo sapiens GN=HSPA1L PE=1 SV=2)

HSP 1 Score: 120.168 bits (300), Expect = 3.345e-27
Identity = 55/68 (80.88%), Postives = 63/68 (92.65%), Query Frame = 1
Query:    1 GGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQI 204
            GGVMT LI RN+TIPTK+ Q+F+TYSDNQPGVLIQVYEGER  T+DNNLLG+F+L+GIPPAPRGVPQI
Sbjct:  409 GGVMTALIKRNSTIPTKQTQIFTTYSDNQPGVLIQVYEGERAMTKDNNLLGRFDLTGIPPAPRGVPQI 476          
BLAST of CK739957 vs. ExPASy Swiss-Prot
Match: HSP76_SAGOE (Heat shock 70 kDa protein 6 OS=Saguinus oedipus GN=HSPA6 PE=2 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 5.706e-27
Identity = 56/68 (82.35%), Postives = 60/68 (88.24%), Query Frame = 1
Query:    1 GGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQI 204
            GGVMT LI RN TIPTK+ Q F+TYSDNQPGV IQVYEGER  T+DNNLLG+FELSGIPPAPRGVPQI
Sbjct:  409 GGVMTTLIQRNATIPTKQTQTFTTYSDNQPGVFIQVYEGERAMTKDNNLLGRFELSGIPPAPRGVPQI 476          
BLAST of CK739957 vs. ExPASy Swiss-Prot
Match: HSP76_HUMAN (Heat shock 70 kDa protein 6 OS=Homo sapiens GN=HSPA6 PE=1 SV=2)

HSP 1 Score: 119.398 bits (298), Expect = 5.706e-27
Identity = 56/68 (82.35%), Postives = 60/68 (88.24%), Query Frame = 1
Query:    1 GGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQI 204
            GGVMT LI RN TIPTK+ Q F+TYSDNQPGV IQVYEGER  T+DNNLLG+FELSGIPPAPRGVPQI
Sbjct:  409 GGVMTTLIQRNATIPTKQTQTFTTYSDNQPGVFIQVYEGERAMTKDNNLLGRFELSGIPPAPRGVPQI 476          
BLAST of CK739957 vs. ExPASy Swiss-Prot
Match: HSP70_BRELC (Heat shock 70 kDa protein OS=Bremia lactucae GN=HSP70 PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 7.452e-27
Identity = 55/68 (80.88%), Postives = 60/68 (88.24%), Query Frame = 1
Query:    1 GGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQI 204
            GGVMT LI RNTT+PTKK Q FSTY+DNQPGVLIQ++EGER+ TRDNNLLGKF L GIPP PRGVPQI
Sbjct:  410 GGVMTTLIARNTTVPTKKSQTFSTYADNQPGVLIQLFEGERSMTRDNNLLGKFNLDGIPPMPRGVPQI 477          
BLAST of CK739957 vs. ExPASy Swiss-Prot
Match: HSP7A_DROME (Heat shock 70 kDa protein cognate 1 OS=Drosophila melanogaster GN=Hsc70-1 PE=1 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 9.732e-27
Identity = 55/68 (80.88%), Postives = 61/68 (89.71%), Query Frame = 1
Query:    1 GGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQI 204
            GGVMT LI RNTTIPTK+ Q+F+TY+DNQPGVLIQV+EGER  TRDNN LGKFELS IPPAPRGVPQ+
Sbjct:  407 GGVMTTLIKRNTTIPTKQTQIFTTYADNQPGVLIQVFEGERAMTRDNNSLGKFELSAIPPAPRGVPQV 474          
BLAST of CK739957 vs. ExPASy Swiss-Prot
Match: GRP78_ASPNG (78 kDa glucose-regulated protein homolog OS=Aspergillus niger GN=bipA PE=2 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 9.732e-27
Identity = 56/68 (82.35%), Postives = 62/68 (91.18%), Query Frame = 1
Query:    1 GGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQI 204
            GGVMT LIPRNT IPT+K Q+FST +DNQP VLIQVYEGER+ T+DNNLLGKFEL+GIPPAPRGVPQI
Sbjct:  449 GGVMTKLIPRNTVIPTRKSQIFSTAADNQPTVLIQVYEGERSLTKDNNLLGKFELTGIPPAPRGVPQI 516          
The following BLAST results are available for this feature:
BLAST of CK739957 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HSP70_SCHMA2.561e-2783.82Heat shock 70 kDa protein homolog OS=Schistosoma m... [more]
HSP73_PLAFA3.345e-2782.35Heat shock 70 kDa protein PPF203 (Fragment) OS=Pla... [more]
HSP70_ACHKL3.345e-2782.35Heat shock 70 kDa protein OS=Achlya klebsiana GN=H... [more]
HS71L_MACFA3.345e-2780.88Heat shock 70 kDa protein 1-like OS=Macaca fascicu... [more]
HS71L_HUMAN3.345e-2780.88Heat shock 70 kDa protein 1-like OS=Homo sapiens G... [more]
HSP76_SAGOE5.706e-2782.35Heat shock 70 kDa protein 6 OS=Saguinus oedipus GN... [more]
HSP76_HUMAN5.706e-2782.35Heat shock 70 kDa protein 6 OS=Homo sapiens GN=HSP... [more]
HSP70_BRELC7.452e-2780.88Heat shock 70 kDa protein OS=Bremia lactucae GN=HS... [more]
HSP7A_DROME9.732e-2780.88Heat shock 70 kDa protein cognate 1 OS=Drosophila ... [more]
GRP78_ASPNG9.732e-2782.3578 kDa glucose-regulated protein homolog OS=Asperg... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_6779 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE68E05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK739957 ID=CK739957; Name=CK739957; organism=Citrus sinensis; type=EST; length=205bp
GGTGGAGTCATGACTGTGTTGATTCCAAGGAACACCACTATTCCAACCAA
GAAGGAGCAGGTGTTCTCCACATACTCTGACAACCAGCCCGGGGTGTTGA
TCCAGGTCTACGAGGGTGAGCGCACAAGAACCCGTGACAACAACTTGCTT
GGAAAGTTTGAGCTCTCTGGCATTCCTCCTGCTCCAAGAGGGGTTCCACA
AATCA
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