CK739957

Overview
NameCK739957
Unique NameCK739957
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length205
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK739957 vs. ExPASy Swiss-Prot
Match: GRP78_ASPKA (78 kDa glucose-regulated protein homolog OS=Aspergillus kawachi GN=bipA PE=3 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 9.732e-27
Identity = 56/68 (82.35%), Postives = 62/68 (91.18%), Query Frame = 1
Query:    1 GGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQI 204
            GGVMT LIPRNT IPT+K Q+FST +DNQP VLIQVYEGER+ T+DNNLLGKFEL+GIPPAPRGVPQI
Sbjct:  449 GGVMTKLIPRNTVIPTRKSQIFSTAADNQPTVLIQVYEGERSLTKDNNLLGKFELTGIPPAPRGVPQI 516          
BLAST of CK739957 vs. ExPASy Swiss-Prot
Match: GRP78_ASPAW (78 kDa glucose-regulated protein homolog OS=Aspergillus awamori GN=bipA PE=2 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 9.732e-27
Identity = 56/68 (82.35%), Postives = 62/68 (91.18%), Query Frame = 1
Query:    1 GGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQI 204
            GGVMT LIPRNT IPT+K Q+FST +DNQP VLIQVYEGER+ T+DNNLLGKFEL+GIPPAPRGVPQI
Sbjct:  449 GGVMTKLIPRNTVIPTRKSQIFSTAADNQPTVLIQVYEGERSLTKDNNLLGKFELTGIPPAPRGVPQI 516          
BLAST of CK739957 vs. ExPASy Swiss-Prot
Match: GRP78_NEUCR (78 kDa glucose-regulated protein homolog OS=Neurospora crassa GN=grp78 PE=3 SV=3)

HSP 1 Score: 118.242 bits (295), Expect = 1.271e-26
Identity = 56/68 (82.35%), Postives = 62/68 (91.18%), Query Frame = 1
Query:    1 GGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQI 204
            GGVMT LIPRNT IPT+K Q+FST +DNQP VLIQVYEGER+ T+DNNLLGKFEL+GIPPAPRGVPQI
Sbjct:  439 GGVMTKLIPRNTPIPTRKSQIFSTAADNQPVVLIQVYEGERSMTKDNNLLGKFELTGIPPAPRGVPQI 506          
BLAST of CK739957 vs. ExPASy Swiss-Prot
Match: HSP70_CLAHE (Heat shock 70 kDa protein OS=Cladosporium herbarum GN=HSP70 PE=1 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 2.168e-26
Identity = 56/68 (82.35%), Postives = 61/68 (89.71%), Query Frame = 1
Query:    1 GGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQI 204
            GGVMT LI RNTTIPTKK + FST+SDNQPGVLIQV+EGER RT+D NL+GKFELSGI PAPRGVPQI
Sbjct:  406 GGVMTALIKRNTTIPTKKSETFSTFSDNQPGVLIQVFEGERARTKDINLMGKFELSGIRPAPRGVPQI 473          
BLAST of CK739957 vs. ExPASy Swiss-Prot
Match: HSP70_BLAEM (Heat shock 70 kDa protein OS=Blastocladiella emersonii GN=HSP70 PE=3 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 2.168e-26
Identity = 56/68 (82.35%), Postives = 60/68 (88.24%), Query Frame = 1
Query:    1 GGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQI 204
            GGVMT LI RNTTIP KK + FSTY+DNQPGVLIQVYEGER RT+DNNLLGKFEL+GIPPAP  VPQI
Sbjct:  410 GGVMTPLIKRNTTIPAKKSETFSTYADNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPPRVPQI 477          
BLAST of CK739957 vs. ExPASy Swiss-Prot
Match: HSP74_TRYBB (Heat shock 70 kDa protein 4 OS=Trypanosoma brucei brucei PE=2 SV=2)

HSP 1 Score: 117.087 bits (292), Expect = 2.832e-26
Identity = 56/68 (82.35%), Postives = 61/68 (89.71%), Query Frame = 1
Query:    1 GGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQI 204
            GGVMT LI RNTTIPTKK Q+FSTYSDNQPGV IQV+EGERT T+D +LLG F+LSGIPPAPRGVPQI
Sbjct:  410 GGVMTALIKRNTTIPTKKSQIFSTYSDNQPGVHIQVFEGERTMTKDCHLLGTFDLSGIPPAPRGVPQI 477          
BLAST of CK739957 vs. ExPASy Swiss-Prot
Match: HSP70_PLAFA (Heat shock 70 kDa protein OS=Plasmodium falciparum PE=2 SV=2)

HSP 1 Score: 116.316 bits (290), Expect = 4.830e-26
Identity = 55/68 (80.88%), Postives = 59/68 (86.76%), Query Frame = 1
Query:    1 GGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQI 204
            GGVMT LI RNTTIP KK Q+F+TY+DNQPGVLIQVYEGER  T+DNNLLGKF L GIPPAPR VPQI
Sbjct:  420 GGVMTKLIERNTTIPAKKSQIFTTYADNQPGVLIQVYEGERALTKDNNLLGKFHLDGIPPAPRKVPQI 487          
BLAST of CK739957 vs. ExPASy Swiss-Prot
Match: HSP70_PLACB (Heat shock 70 kDa protein OS=Plasmodium cynomolgi (strain Berok) PE=2 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 4.830e-26
Identity = 55/68 (80.88%), Postives = 59/68 (86.76%), Query Frame = 1
Query:    1 GGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQI 204
            GGVMT LI RNTTIP KK Q+F+TY+DNQPGVLIQVYEGER  T+DNNLLGKF L GIPPAPR VPQI
Sbjct:  420 GGVMTKLIERNTTIPAKKSQIFTTYADNQPGVLIQVYEGERALTKDNNLLGKFHLDGIPPAPRKVPQI 487          
BLAST of CK739957 vs. ExPASy Swiss-Prot
Match: HSP71_CERAE (Heat shock 70 kDa protein 1 OS=Cercopithecus aethiops GN=HSPA1 PE=2 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 6.308e-26
Identity = 56/68 (82.35%), Postives = 62/68 (91.18%), Query Frame = 1
Query:    1 GGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQI 204
            GGVMT LI RN+TIPTK+ Q+F+TYSDNQPGVLIQVYEGER  T+DNNLLG+FELSGIPPAP GVPQI
Sbjct:  405 GGVMTALIKRNSTIPTKQTQIFTTYSDNQPGVLIQVYEGERAMTKDNNLLGRFELSGIPPAP-GVPQI 471          
BLAST of CK739957 vs. ExPASy Swiss-Prot
Match: HSP70_CHICK (Heat shock 70 kDa protein OS=Gallus gallus PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 6.308e-26
Identity = 54/68 (79.41%), Postives = 60/68 (88.24%), Query Frame = 1
Query:    1 GGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQI 204
            GGVMT LI RNTTIPTK+ Q F+TYSDNQ  VL+QVYEGER  T+DNNLLGKF+L+GIPPAPRGVPQI
Sbjct:  410 GGVMTALIKRNTTIPTKQTQTFTTYSDNQSSVLVQVYEGERAMTKDNNLLGKFDLTGIPPAPRGVPQI 477          
The following BLAST results are available for this feature:
BLAST of CK739957 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
GRP78_ASPKA9.732e-2782.3578 kDa glucose-regulated protein homolog OS=Asperg... [more]
GRP78_ASPAW9.732e-2782.3578 kDa glucose-regulated protein homolog OS=Asperg... [more]
GRP78_NEUCR1.271e-2682.3578 kDa glucose-regulated protein homolog OS=Neuros... [more]
HSP70_CLAHE2.168e-2682.35Heat shock 70 kDa protein OS=Cladosporium herbarum... [more]
HSP70_BLAEM2.168e-2682.35Heat shock 70 kDa protein OS=Blastocladiella emers... [more]
HSP74_TRYBB2.832e-2682.35Heat shock 70 kDa protein 4 OS=Trypanosoma brucei ... [more]
HSP70_PLAFA4.830e-2680.88Heat shock 70 kDa protein OS=Plasmodium falciparum... [more]
HSP70_PLACB4.830e-2680.88Heat shock 70 kDa protein OS=Plasmodium cynomolgi ... [more]
HSP71_CERAE6.308e-2682.35Heat shock 70 kDa protein 1 OS=Cercopithecus aethi... [more]
HSP70_CHICK6.308e-2679.41Heat shock 70 kDa protein OS=Gallus gallus PE=3 SV... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_6779 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE68E05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK739957 ID=CK739957; Name=CK739957; organism=Citrus sinensis; type=EST; length=205bp
GGTGGAGTCATGACTGTGTTGATTCCAAGGAACACCACTATTCCAACCAA
GAAGGAGCAGGTGTTCTCCACATACTCTGACAACCAGCCCGGGGTGTTGA
TCCAGGTCTACGAGGGTGAGCGCACAAGAACCCGTGACAACAACTTGCTT
GGAAAGTTTGAGCTCTCTGGCATTCCTCCTGCTCCAAGAGGGGTTCCACA
AATCA
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