CK739957

Overview
NameCK739957
Unique NameCK739957
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length205
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CK739957 vs. ExPASy Swiss-Prot
Match: HS7C3_DICDI (Heat shock cognate 70 kDa protein 3 OS=Dictyostelium discoideum GN=DDB_G0293674 PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 6.308e-26
Identity = 54/68 (79.41%), Postives = 60/68 (88.24%), Query Frame = 1 
Query:    1 GGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQI 204
            GGVMT ++PRNT IP KK Q FST++DNQ GVLIQVYEGERT T+DNNLLGKFEL+GIPPAPRG PQI
Sbjct:  408 GGVMTNIVPRNTIIPCKKTQTFSTHTDNQSGVLIQVYEGERTMTKDNNLLGKFELTGIPPAPRGTPQI 475
[Close]
BLAST of CK739957 vs. ExPASy Swiss-Prot
Match: HSP72_RAT (Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus GN=Hspa2 PE=2 SV=2)

HSP 1 Score: 115.161 bits (287), Expect = 1.076e-25
Identity = 54/68 (79.41%), Postives = 60/68 (88.24%), Query Frame = 1 
Query:    1 GGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQI 204
            GGVMT LI RNTTIPTK+ Q F+TYSDNQ  VL+QVYEGER  T+DNNLLGKF+L+GIPPAPRGVPQI
Sbjct:  410 GGVMTPLIKRNTTIPTKQTQTFTTYSDNQSSVLVQVYEGERAMTKDNNLLGKFDLTGIPPAPRGVPQI 477
[Close]
BLAST of CK739957 vs. ExPASy Swiss-Prot
Match: HSP72_MOUSE (Heat shock-related 70 kDa protein 2 OS=Mus musculus GN=Hspa2 PE=1 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 1.076e-25
Identity = 54/68 (79.41%), Postives = 60/68 (88.24%), Query Frame = 1 
Query:    1 GGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQI 204
            GGVMT LI RNTTIPTK+ Q F+TYSDNQ  VL+QVYEGER  T+DNNLLGKF+L+GIPPAPRGVPQI
Sbjct:  410 GGVMTPLIKRNTTIPTKQTQTFTTYSDNQSSVLVQVYEGERAMTKDNNLLGKFDLTGIPPAPRGVPQI 477
[Close]
BLAST of CK739957 vs. ExPASy Swiss-Prot
Match: HSP72_HUMAN (Heat shock-related 70 kDa protein 2 OS=Homo sapiens GN=HSPA2 PE=1 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 1.076e-25
Identity = 54/68 (79.41%), Postives = 60/68 (88.24%), Query Frame = 1 
Query:    1 GGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQI 204
            GGVMT LI RNTTIPTK+ Q F+TYSDNQ  VL+QVYEGER  T+DNNLLGKF+L+GIPPAPRGVPQI
Sbjct:  410 GGVMTPLIKRNTTIPTKQTQTFTTYSDNQSSVLVQVYEGERAMTKDNNLLGKFDLTGIPPAPRGVPQI 477
[Close]
BLAST of CK739957 vs. ExPASy Swiss-Prot
Match: HSP72_CAPHI (Heat shock-related 70 kDa protein 2 OS=Capra hircus GN=HSPA2 PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 1.076e-25
Identity = 54/68 (79.41%), Postives = 60/68 (88.24%), Query Frame = 1 
Query:    1 GGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQI 204
            GGVMT LI RNTTIPTK+ Q F+TYSDNQ  VL+QVYEGER  T+DNNLLGKF+L+GIPPAPRGVPQI
Sbjct:  410 GGVMTPLIKRNTTIPTKQTQTFTTYSDNQSSVLVQVYEGERAMTKDNNLLGKFDLTGIPPAPRGVPQI 477
[Close]
BLAST of CK739957 vs. ExPASy Swiss-Prot
Match: HSP72_BOVIN (Heat shock-related 70 kDa protein 2 OS=Bos taurus GN=HSPA2 PE=2 SV=2)

HSP 1 Score: 115.161 bits (287), Expect = 1.076e-25
Identity = 54/68 (79.41%), Postives = 60/68 (88.24%), Query Frame = 1 
Query:    1 GGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQI 204
            GGVMT LI RNTTIPTK+ Q F+TYSDNQ  VL+QVYEGER  T+DNNLLGKF+L+GIPPAPRGVPQI
Sbjct:  410 GGVMTPLIKRNTTIPTKQTQTFTTYSDNQSSVLVQVYEGERAMTKDNNLLGKFDLTGIPPAPRGVPQI 477
[Close]
BLAST of CK739957 vs. ExPASy Swiss-Prot
Match: GRP78_APLCA (78 kDa glucose-regulated protein OS=Aplysia californica PE=1 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 1.076e-25
Identity = 54/68 (79.41%), Postives = 61/68 (89.71%), Query Frame = 1 
Query:    1 GGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQI 204
            GGVMT LIPRNT IPTKK Q+FST +DNQP V IQVYEGER+ T+DN+LLGKF+L+GIPPAPRGVPQI
Sbjct:  439 GGVMTKLIPRNTVIPTKKSQIFSTAADNQPTVTIQVYEGERSMTKDNHLLGKFDLTGIPPAPRGVPQI 506
[Close]
BLAST of CK739957 vs. ExPASy Swiss-Prot
Match: HSP71_PARBA (Heat shock 70 kDa protein 1 OS=Paracoccidioides brasiliensis (strain ATCC MYA-826 / Pb01) GN=HSP70-1 PE=1 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 2.397e-25
Identity = 55/68 (80.88%), Postives = 62/68 (91.18%), Query Frame = 1 
Query:    1 GGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQI 204
            GGVMT LI RNTTIPTKK + FST++DNQPGVLIQV+EGER RT++NNLLGKFEL+GIPPAP GVPQI
Sbjct:  405 GGVMTPLIKRNTTIPTKKSETFSTFADNQPGVLIQVFEGERARTKENNLLGKFELTGIPPAP-GVPQI 471
[Close]
BLAST of CK739957 vs. ExPASy Swiss-Prot
Match: HSP70_LEIMA (Heat shock 70 kDa protein (Fragment) OS=Leishmania major GN=HSP70 PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 2.397e-25
Identity = 54/68 (79.41%), Postives = 60/68 (88.24%), Query Frame = 1 
Query:    1 GGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQI 204
            GGVMT LI RNTTIPTKK Q+FSTY+DNQPGV IQV+EGER  T+D +LLG F+LSGIPPAPRGVPQI
Sbjct:  410 GGVMTALIKRNTTIPTKKSQIFSTYADNQPGVHIQVFEGERAMTKDCHLLGTFDLSGIPPAPRGVPQI 477
[Close]
BLAST of CK739957 vs. ExPASy Swiss-Prot
Match: HSP70_LEIDO (Heat shock 70 kDa protein OS=Leishmania donovani GN=HSP70 PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 2.397e-25
Identity = 54/68 (79.41%), Postives = 60/68 (88.24%), Query Frame = 1 
Query:    1 GGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQI 204
            GGVMT LI RNTTIPTKK Q+FSTY+DNQPGV IQV+EGER  T+D +LLG F+LSGIPPAPRGVPQI
Sbjct:  409 GGVMTALIKRNTTIPTKKSQIFSTYADNQPGVHIQVFEGERAMTKDCHLLGTFDLSGIPPAPRGVPQI 476
The following BLAST results are available for this feature:
BLAST of CK739957 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HS7C3_DICDI6.308e-2679.41Heat shock cognate 70 kDa protein 3 OS=Dictyosteli... [more]
HSP72_RAT1.076e-2579.41Heat shock-related 70 kDa protein 2 OS=Rattus norv... [more]
HSP72_MOUSE1.076e-2579.41Heat shock-related 70 kDa protein 2 OS=Mus musculu... [more]
HSP72_HUMAN1.076e-2579.41Heat shock-related 70 kDa protein 2 OS=Homo sapien... [more]
HSP72_CAPHI1.076e-2579.41Heat shock-related 70 kDa protein 2 OS=Capra hircu... [more]
HSP72_BOVIN1.076e-2579.41Heat shock-related 70 kDa protein 2 OS=Bos taurus ... [more]
GRP78_APLCA1.076e-2579.4178 kDa glucose-regulated protein OS=Aplysia califo... [more]
HSP71_PARBA2.397e-2580.88Heat shock 70 kDa protein 1 OS=Paracoccidioides br... [more]
HSP70_LEIMA2.397e-2579.41Heat shock 70 kDa protein (Fragment) OS=Leishmania... [more]
HSP70_LEIDO2.397e-2579.41Heat shock 70 kDa protein OS=Leishmania donovani G... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_6779 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE68E05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK739957 ID=CK739957; Name=CK739957; organism=Citrus sinensis; type=EST; length=205bp
GGTGGAGTCATGACTGTGTTGATTCCAAGGAACACCACTATTCCAACCAA
GAAGGAGCAGGTGTTCTCCACATACTCTGACAACCAGCCCGGGGTGTTGA
TCCAGGTCTACGAGGGTGAGCGCACAAGAACCCGTGACAACAACTTGCTT
GGAAAGTTTGAGCTCTCTGGCATTCCTCCTGCTCCAAGAGGGGTTCCACA
AATCA
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