CK739961 | Citrus Genome Database

Overview


Name	CK739961
Unique Name	CK739961
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	404

Libraries


Library Name	Type
Ridge pineapple sweet orange entire seedling	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

BLAST of CK739961 vs. ExPASy Swiss-Prot
Match: KAD_BURP1 (Adenylate kinase OS=Burkholderia pseudomallei (strain 1710b) GN=adk PE=1 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 2.868e-27
Identity = 53/113 (46.90%), Postives = 76/113 (67.26%), Query Frame = 1

Query:    1 AKTPLGIKAKEAMDKGDLVSDDLVVGIIDEAMKKPSCQKGFILDGFPRTEVQAQKLDEMLEKQGKKVDKVLNFAIDDAVLEERITGRWIHPSSGRTYHTKFAPPKVPGVDDVS 339
            A TPLG++AK  MD+G LV D L++G++ E +K+  C  G++ DGFPRT  QA    + +++ G  +D VL   +  + + ER++GR  HP+SGRTYH KF PPKV G DDV+
Sbjct:   41 AGTPLGVEAKTYMDEGKLVPDSLIIGLVKERLKEADCANGYLFDGFPRTIAQA----DAMKEAGVAIDYVLEIDVPFSEIIERMSGRRTHPASGRTYHVKFNPPKVEGKDDVT 149

HSP 2 Score: 29.261 bits (64), Expect = 2.868e-27
Identity = 12/21 (57.14%), Postives = 15/21 (71.43%), Query Frame = 2

Query:  341 NVTGEPLIQRKDDTAAVLKSR 403
            +VTGEPL+QR DD    +K R
Sbjct:  147 DVTGEPLVQRDDDKEETVKKR 167

BLAST of CK739961 vs. ExPASy Swiss-Prot
Match: KAD_BURP0 (Adenylate kinase OS=Burkholderia pseudomallei (strain 1106a) GN=adk PE=3 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 2.868e-27
Identity = 53/113 (46.90%), Postives = 76/113 (67.26%), Query Frame = 1

Query:    1 AKTPLGIKAKEAMDKGDLVSDDLVVGIIDEAMKKPSCQKGFILDGFPRTEVQAQKLDEMLEKQGKKVDKVLNFAIDDAVLEERITGRWIHPSSGRTYHTKFAPPKVPGVDDVS 339
            A TPLG++AK  MD+G LV D L++G++ E +K+  C  G++ DGFPRT  QA    + +++ G  +D VL   +  + + ER++GR  HP+SGRTYH KF PPKV G DDV+
Sbjct:   41 AGTPLGVEAKTYMDEGKLVPDSLIIGLVKERLKEADCANGYLFDGFPRTIAQA----DAMKEAGVAIDYVLEIDVPFSEIIERMSGRRTHPASGRTYHVKFNPPKVEGKDDVT 149

HSP 2 Score: 29.261 bits (64), Expect = 2.868e-27
Identity = 12/21 (57.14%), Postives = 15/21 (71.43%), Query Frame = 2

Query:  341 NVTGEPLIQRKDDTAAVLKSR 403
            +VTGEPL+QR DD    +K R
Sbjct:  147 DVTGEPLVQRDDDKEETVKKR 167

BLAST of CK739961 vs. ExPASy Swiss-Prot
Match: KAD_BURMS (Adenylate kinase OS=Burkholderia mallei (strain SAVP1) GN=adk PE=3 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 2.868e-27
Identity = 53/113 (46.90%), Postives = 76/113 (67.26%), Query Frame = 1

Query:    1 AKTPLGIKAKEAMDKGDLVSDDLVVGIIDEAMKKPSCQKGFILDGFPRTEVQAQKLDEMLEKQGKKVDKVLNFAIDDAVLEERITGRWIHPSSGRTYHTKFAPPKVPGVDDVS 339
            A TPLG++AK  MD+G LV D L++G++ E +K+  C  G++ DGFPRT  QA    + +++ G  +D VL   +  + + ER++GR  HP+SGRTYH KF PPKV G DDV+
Sbjct:   41 AGTPLGVEAKTYMDEGKLVPDSLIIGLVKERLKEADCANGYLFDGFPRTIAQA----DAMKEAGVAIDYVLEIDVPFSEIIERMSGRRTHPASGRTYHVKFNPPKVEGKDDVT 149

HSP 2 Score: 29.261 bits (64), Expect = 2.868e-27
Identity = 12/21 (57.14%), Postives = 15/21 (71.43%), Query Frame = 2

Query:  341 NVTGEPLIQRKDDTAAVLKSR 403
            +VTGEPL+QR DD    +K R
Sbjct:  147 DVTGEPLVQRDDDKEETVKKR 167

BLAST of CK739961 vs. ExPASy Swiss-Prot
Match: KAD_BURMA (Adenylate kinase OS=Burkholderia mallei GN=adk PE=3 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 2.868e-27
Identity = 53/113 (46.90%), Postives = 76/113 (67.26%), Query Frame = 1

Query:    1 AKTPLGIKAKEAMDKGDLVSDDLVVGIIDEAMKKPSCQKGFILDGFPRTEVQAQKLDEMLEKQGKKVDKVLNFAIDDAVLEERITGRWIHPSSGRTYHTKFAPPKVPGVDDVS 339
            A TPLG++AK  MD+G LV D L++G++ E +K+  C  G++ DGFPRT  QA    + +++ G  +D VL   +  + + ER++GR  HP+SGRTYH KF PPKV G DDV+
Sbjct:   41 AGTPLGVEAKTYMDEGKLVPDSLIIGLVKERLKEADCANGYLFDGFPRTIAQA----DAMKEAGVAIDYVLEIDVPFSEIIERMSGRRTHPASGRTYHVKFNPPKVEGKDDVT 149

HSP 2 Score: 29.261 bits (64), Expect = 2.868e-27
Identity = 12/21 (57.14%), Postives = 15/21 (71.43%), Query Frame = 2

Query:  341 NVTGEPLIQRKDDTAAVLKSR 403
            +VTGEPL+QR DD    +K R
Sbjct:  147 DVTGEPLVQRDDDKEETVKKR 167

BLAST of CK739961 vs. ExPASy Swiss-Prot
Match: KAD_BURM9 (Adenylate kinase OS=Burkholderia mallei (strain NCTC 10229) GN=adk PE=3 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 2.868e-27
Identity = 53/113 (46.90%), Postives = 76/113 (67.26%), Query Frame = 1

Query:    1 AKTPLGIKAKEAMDKGDLVSDDLVVGIIDEAMKKPSCQKGFILDGFPRTEVQAQKLDEMLEKQGKKVDKVLNFAIDDAVLEERITGRWIHPSSGRTYHTKFAPPKVPGVDDVS 339
            A TPLG++AK  MD+G LV D L++G++ E +K+  C  G++ DGFPRT  QA    + +++ G  +D VL   +  + + ER++GR  HP+SGRTYH KF PPKV G DDV+
Sbjct:   41 AGTPLGVEAKTYMDEGKLVPDSLIIGLVKERLKEADCANGYLFDGFPRTIAQA----DAMKEAGVAIDYVLEIDVPFSEIIERMSGRRTHPASGRTYHVKFNPPKVEGKDDVT 149

HSP 2 Score: 29.261 bits (64), Expect = 2.868e-27
Identity = 12/21 (57.14%), Postives = 15/21 (71.43%), Query Frame = 2

Query:  341 NVTGEPLIQRKDDTAAVLKSR 403
            +VTGEPL+QR DD    +K R
Sbjct:  147 DVTGEPLVQRDDDKEETVKKR 167

BLAST of CK739961 vs. ExPASy Swiss-Prot
Match: KAD_BURM7 (Adenylate kinase OS=Burkholderia mallei (strain NCTC 10247) GN=adk PE=3 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 2.868e-27
Identity = 53/113 (46.90%), Postives = 76/113 (67.26%), Query Frame = 1

Query:    1 AKTPLGIKAKEAMDKGDLVSDDLVVGIIDEAMKKPSCQKGFILDGFPRTEVQAQKLDEMLEKQGKKVDKVLNFAIDDAVLEERITGRWIHPSSGRTYHTKFAPPKVPGVDDVS 339
            A TPLG++AK  MD+G LV D L++G++ E +K+  C  G++ DGFPRT  QA    + +++ G  +D VL   +  + + ER++GR  HP+SGRTYH KF PPKV G DDV+
Sbjct:   41 AGTPLGVEAKTYMDEGKLVPDSLIIGLVKERLKEADCANGYLFDGFPRTIAQA----DAMKEAGVAIDYVLEIDVPFSEIIERMSGRRTHPASGRTYHVKFNPPKVEGKDDVT 149

HSP 2 Score: 29.261 bits (64), Expect = 2.868e-27
Identity = 12/21 (57.14%), Postives = 15/21 (71.43%), Query Frame = 2

Query:  341 NVTGEPLIQRKDDTAAVLKSR 403
            +VTGEPL+QR DD    +K R
Sbjct:  147 DVTGEPLVQRDDDKEETVKKR 167

BLAST of CK739961 vs. ExPASy Swiss-Prot
Match: KAD_RHOFD (Adenylate kinase OS=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) GN=adk PE=3 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 2.869e-27
Identity = 56/113 (49.56%), Postives = 75/113 (66.37%), Query Frame = 1

Query:    1 AKTPLGIKAKEAMDKGDLVSDDLVVGIIDEAMKKPSCQKGFILDGFPRTEVQAQKLDEMLEKQGKKVDKVLNFAIDDAVLEERITGRWIHPSSGRTYHTKFAPPKVPGVDDVS 339
            A TPLGI+AK+ MD G LVSDDL++ ++ E + +  C  GF+ DGFPRT  QA    + ++  G K+D VL   +    + ER++GR  H +SGRTYH KF PPKV GVDDV+
Sbjct:   41 AGTPLGIEAKKVMDAGGLVSDDLIINLVKERIAQSDCAAGFLFDGFPRTIPQA----DAMKAAGVKLDYVLEIDVPFDAIIERMSGRRSHAASGRTYHVKFNPPKVAGVDDVT 149

HSP 2 Score: 29.6462 bits (65), Expect = 2.869e-27
Identity = 13/21 (61.90%), Postives = 15/21 (71.43%), Query Frame = 2

Query:  341 NVTGEPLIQRKDDTAAVLKSR 403
            +VTGEPLIQR DD    +K R
Sbjct:  147 DVTGEPLIQRDDDKEETVKKR 167

BLAST of CK739961 vs. ExPASy Swiss-Prot
Match: KAD1_PYRTR (Adenylate kinase 1 OS=Pyrenophora tritici-repentis (strain Pt-1C-BFP) GN=adk1 PE=3 SV=2)

HSP 1 Score: 120.168 bits (300), Expect = 3.390e-27
Identity = 61/114 (53.51%), Postives = 76/114 (66.67%), Query Frame = 1

Query:    1 AKTPLGIKAKEAMDKGDLVSDDLVVGIID-EAMKKPSCQKGFILDGFPRTEVQAQKLDEMLEKQGKKVDKVLNFAIDDAVLEERITGRWIHPSSGRTYHTKFAPPKVPGVDDVS 339
            AKTPLG +AK+ MD G LVSD+++V +I  E      C +GFILDGFPRT  QA+KLD ML    K +   +   IDD +L  RITGR +HP+SGR+YH  F PPK P  DDV+
Sbjct:   83 AKTPLGREAKKIMDAGGLVSDEIMVNMIKTELENNQECARGFILDGFPRTVTQAEKLDGMLAATKKPLQHAVELQIDDGLLVSRITGRLVHPASGRSYHKIFNPPKAPMTDDVT 196

BLAST of CK739961 vs. ExPASy Swiss-Prot
Match: KAD_CARHZ (Adenylate kinase OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=adk PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 4.428e-27
Identity = 57/110 (51.82%), Postives = 76/110 (69.09%), Query Frame = 1

Query:    4 KTPLGIKAKEAMDKGDLVSDDLVVGIIDEAMKKPSCQKGFILDGFPRTEVQAQKLDEMLEKQGKKVDKVLNFAIDDAVLEERITGRWIHPSSGRTYHTKFAPPKVPGVDD 333
            +TPLG+KAKE MDKG+LV D++V+ +++E +  P C KGF+LDGFPRT  QA+ LD+ L + G  +D V+N  +    L ER+TGR +    G TYH KF PPKV GV D
Sbjct:   42 QTPLGLKAKEYMDKGELVPDEIVIAMVEERISAPDCAKGFLLDGFPRTIPQAEALDKKLAEMGITLDGVINIEVPREELIERLTGRRVCRQCGATYHVKFNPPKVEGVCD 151

BLAST of CK739961 vs. ExPASy Swiss-Prot
Match: KAD1_PENMA (Adenylate kinase 1 OS=Penicillium marneffei GN=adk1 PE=3 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 5.783e-27
Identity = 58/113 (51.33%), Postives = 81/113 (71.68%), Query Frame = 1

Query:    4 KTPLGIKAKEAMDKGDLVSDDLVVGIIDEAMKKPS-CQKGFILDGFPRTEVQAQKLDEMLEKQGKKVDKVLNFAIDDAVLEERITGRWIHPSSGRTYHTKFAPPKVPGVDDVS 339
            KTPLG +AK+ MD+G LVSD+++V +I   ++  S C+ GFILDGFPRT  QA++LD+ML  + +K+   +   IDDA+L  RITGR +HP+SGR+YH  F PPK    DD++
Sbjct:   87 KTPLGKEAKKIMDQGGLVSDEIMVNMIKSELETNSECKNGFILDGFPRTVAQAERLDDMLSARNEKLQHAVELQIDDALLVARITGRLVHPASGRSYHKIFNPPKQDMKDDIT 199

The following BLAST results are available for this feature:

BLAST of CK739961 vs. ExPASy Swiss-Prot

BLAST of CK739961 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500


Match Name	E-value	Identity	Description
KAD_BURP1	2.868e-27	46.90	Adenylate kinase OS=Burkholderia pseudomallei (str...	[more]
KAD_BURP0	2.868e-27	46.90	Adenylate kinase OS=Burkholderia pseudomallei (str...	[more]
KAD_BURMS	2.868e-27	46.90	Adenylate kinase OS=Burkholderia mallei (strain SA...	[more]
KAD_BURMA	2.868e-27	46.90	Adenylate kinase OS=Burkholderia mallei GN=adk PE=...	[more]
KAD_BURM9	2.868e-27	46.90	Adenylate kinase OS=Burkholderia mallei (strain NC...	[more]
KAD_BURM7	2.868e-27	46.90	Adenylate kinase OS=Burkholderia mallei (strain NC...	[more]
KAD_RHOFD	2.869e-27	49.56	Adenylate kinase OS=Rhodoferax ferrireducens (stra...	[more]
KAD1_PYRTR	3.390e-27	53.51	Adenylate kinase 1 OS=Pyrenophora tritici-repentis...	[more]
KAD_CARHZ	4.428e-27	51.82	Adenylate kinase OS=Carboxydothermus hydrogenoform...	[more]
KAD1_PENMA	5.783e-27	51.33	Adenylate kinase 1 OS=Penicillium marneffei GN=adk...	[more]

Pages

Properties


Property Name	Value
Genbank description	USDA-FP_6783 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE68E12 5, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>CK739961 ID=CK739961; Name=CK739961; organism=Citrus sinensis; type=EST; length=404bp
GCTAAAACTCCTCTTGGGATCAAGGCTAAGGAGGCTATGGACAAGGGAGA
CCTTGTTTCTGATGACTTGGTTGTTGGTATCATAGATGAAGCAATGAAGA
AACCTTCTTGTCAGAAAGGTTTCATTCTTGACGGGTTTCCCAGAACTGAG
GTCCAAGCTCAGAAGCTGGACGAGATGCTTGAGAAGCAGGGAAAAAAAGT
TGATAAGGTTCTCAACTTTGCTATTGATGATGCGGTTTTGGAAGAGAGGA
TTACTGGTCGCTGGATCCACCCTTCGAGTGGCAGGACCTACCACACAAAA
TTTGCACCTCCCAAGGTTCCTGGTGTTGACGATGTAAGTCAATGTAACTG
GAGAACCTTTGATTCAACGTAAAGATGACACTGCAGCTGTTCTCAAGTCA
AGGC