CK739967
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK739967 vs. ExPASy Swiss-Prot
Match: RS19E_ARCFU (30S ribosomal protein S19e OS=Archaeoglobus fulgidus GN=rps19e PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 2.042e-16 Identity = 46/104 (44.23%), Postives = 59/104 (56.73%), Query Frame = 2 Query: 77 TVKDVSPHEFVKAYSAHLKRSGKMELPP-WTDIVKTAQFKELAPYDPDWYYVRAASMARKIYLRQGLGVGSFRRIYGGSKRNGSRPPHFCKSSGAIARHILQQL 385 TV DV +K + LK M PP W VKT KE +P DW+Y+R AS+ R++Y+ +G+ R YGG KR GS+PP F K SGAI R+ L QL Sbjct: 3 TVYDVPADLLIKRVAERLK---DMVAPPEWAKYVKTGVHKERSPEQDDWWYLRLASIFRRVYIDGPVGIERLRTFYGGRKRRGSKPPKFRKGSGAIVRNALHQL 103
BLAST of CK739967 vs. ExPASy Swiss-Prot
Match: RS19E_METJA (30S ribosomal protein S19e OS=Methanocaldococcus jannaschii GN=rps19e PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 5.942e-16 Identity = 43/103 (41.75%), Postives = 56/103 (54.37%), Query Frame = 2 Query: 77 TVKDVSPHEFVKAYSAHLKRSGKMELPPWTDIVKTAQFKELAPYDPDWYYVRAASMARKIYLRQGLGVGSFRRIYGGSKRNGSRPPHFCKSSGAIARHILQQL 385 TV DV + ++ + LK + +P W D VKT +E P DW+Y+R AS+ RKIY+ +GV R YGG K G P HF K SG I R LQ+L Sbjct: 3 TVYDVPADKLIQKTAEKLKEMN-IGVPEWVDFVKTGVSRERRPDQDDWWYIRCASILRKIYIYGPVGVSRLRTAYGGRKNRGHEPEHFYKGSGNIIRKALQEL 104
BLAST of CK739967 vs. ExPASy Swiss-Prot
Match: RS19E_AERPE (30S ribosomal protein S19e OS=Aeropyrum pernix GN=rps19e PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 1.729e-15 Identity = 39/78 (50.00%), Postives = 50/78 (64.10%), Query Frame = 2 Query: 155 PPWTDIVKTAQFKELAPYDPDWYYVRAASMARKIYLR-QGLGVGSFRRIYGGSKRNGSRPPHFCKSSGAIARHILQQL 385 P W KT KE P D DW+YVRAAS+ RK+Y + +G+ +FR IYGG + GS P HF K+ G++ R ILQQL Sbjct: 30 PAWAYFAKTGPHKERPPTDRDWWYVRAASILRKLYKSPEPIGIETFRTIYGGRQNRGSAPEHFRKAGGSVPRKILQQL 107
BLAST of CK739967 vs. ExPASy Swiss-Prot
Match: RS19E_PYRHO (30S ribosomal protein S19e OS=Pyrococcus horikoshii GN=rps19e PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 6.570e-15 Identity = 40/103 (38.83%), Postives = 55/103 (53.40%), Query Frame = 2 Query: 77 TVKDVSPHEFVKAYSAHLKRSGKMELPPWTDIVKTAQFKELAPYDPDWYYVRAASMARKIYLRQGLGVGSFRRIYGGSKRNGSRPPHFCKSSGAIARHILQQL 385 TV DV V+ + LK +++ P W VKT + KE P DW+Y R AS+ R++Y+ +G+ R YGG K G P F K+ G+I R LQQL Sbjct: 3 TVYDVPGDLLVERVAQRLKEIPEIKPPEWAPFVKTGRHKERLPEQEDWWYYRVASILRRVYIDGPVGIERLRTYYGGRKNRGHAPERFYKAGGSIIRKALQQL 105
BLAST of CK739967 vs. ExPASy Swiss-Prot
Match: RS19E_THEVO (30S ribosomal protein S19e OS=Thermoplasma volcanium GN=rps19e PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 1.049e-12 Identity = 39/103 (37.86%), Postives = 50/103 (48.54%), Query Frame = 2 Query: 77 TVKDVSPHEFVKAYSAHLKRSGKMELPPWTDIVKTAQFKELAPYDPDWYYVRAASMARKIYLRQGLGVGSFRRIYGGSKRNGSRPPHFCKSSGAIARHILQQL 385 +VK V + S LK K++ P W VKT KE P DW YVRAASM RK+Y+ LG+ YGG GS+ H S +I R + +L Sbjct: 3 SVKYVPSDMLINYVSGKLKEEKKIKEPNWVKFVKTGVSKEKPPLQDDWIYVRAASMLRKLYINGYLGISRMSSEYGGKVDRGSKRYHAASGSRSITRFLFHEL 105
BLAST of CK739967 vs. ExPASy Swiss-Prot
Match: RS19E_THEAC (30S ribosomal protein S19e OS=Thermoplasma acidophilum GN=rps19e PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 5.205e-12 Identity = 37/103 (35.92%), Postives = 54/103 (52.43%), Query Frame = 2 Query: 77 TVKDVSPHEFVKAYSAHLKRSGKMELPPWTDIVKTAQFKELAPYDPDWYYVRAASMARKIYLRQGLGVGSFRRIYGGSKRNGSRPPHFCKSSGAIARHILQQL 385 +VK V + S LK K+ P W+ VKT +E +P + DW YVRAA+M RK+Y+ LG+ YGG GS+ H + S +I R++ +L Sbjct: 3 SVKYVPSDLLINYVSEKLKSEKKIAEPDWSKYVKTGISREKSPVNRDWIYVRAAAMLRKLYINGYLGISRMSSEYGGKVDRGSKRYHAAQGSRSIIRYLFHEL 105
BLAST of CK739967 vs. ExPASy Swiss-Prot
Match: RS19E_HALMA (30S ribosomal protein S19e OS=Haloarcula marismortui GN=rps19e PE=1 SV=3) HSP 1 Score: 66.2402 bits (160), Expect = 5.755e-11 Identity = 40/107 (37.38%), Postives = 56/107 (52.34%), Query Frame = 2 Query: 77 TVKDVSPHEFVKAYSAHLKRSGKMELPPWTDIVKTAQFKELAPYDPDWYYVRAASMARKIYLRQGLGVGSFRRIYGGSKRNGS----RPPHFCKSSGAIARHILQQL 385 T+ DV P E ++A + L +E P W + KT +EL P D++ RAAS+ RK+ + +GV + R YG SK+ + RP K SG I R LQQL Sbjct: 3 TLYDVPPEELIEALTETLADEDDIEAPDWAEFTKTGVDRELPPEQEDFWTRRAASLLRKVAVDGPVGVNALRSEYGTSKQGTTRYRVRPHQKTKGSGNIIRTALQQL 109 The following BLAST results are available for this feature:
BLAST of CK739967 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 37
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CK739967 ID=CK739967; Name=CK739967; organism=Citrus sinensis; type=EST; length=386bpback to top |