CK739971

Overview
NameCK739971
Unique NameCK739971
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length565
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2701 contig Csv1_Contig2701:800..1364. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK739971 vs. ExPASy Swiss-Prot
Match: TAL_MYCMM (Transaldolase OS=Mycobacterium marinum (strain ATCC BAA-535 / M) GN=tal PE=3 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 5.898e-37
Identity = 91/190 (47.89%), Postives = 119/190 (62.63%), Query Frame = 1
Query:    1 LIFSLARYEEVIDAYLDGLEASGLS--DLSRVTSVASFFVSRVDTLIDKMLEKIGTPEALDLRGXXXXXXXXXXXXXXXXXFSGP-RWDALVKKGAKKQRLLWASTSVKNPAYPDTLYVAPLIGPDTVSTMPDQALQAFVDHGAV-SRTIDLNVSEAEGIYSALEKLGIDWNYVGT*LELEGVDSFKKSF 558
            LIFS+ R+  V+DAYL G+E +  +  DLS++ SVASFFVSRVDT ID  LE+IG+ EAL LRG                 F G  R+ AL ++GA+ QR LWAST VKNP Y DTLYV  L+ P TV+TMP++ L A  DHG V   +I     +A+ ++  LE +GID + V   LE EGV+ F+ S+
Sbjct:  168 LIFSVDRHRGVMDAYLTGMEKAAQAGHDLSKIHSVASFFVSRVDTEIDNRLEQIGSAEALALRGQAGVANARLAYAAYQEVFEGDARYQALKERGARVQRPLWASTGVKNPDYSDTLYVTELVAPHTVNTMPEKTLDAVADHGVVKGDSITGTSGDAQQVFDKLEAIGIDLSDVFDVLESEGVEKFEASW 357          
BLAST of CK739971 vs. ExPASy Swiss-Prot
Match: TAL_MYCLE (Transaldolase OS=Mycobacterium leprae GN=tal PE=3 SV=2)

HSP 1 Score: 153.68 bits (387), Expect = 5.898e-37
Identity = 90/191 (47.12%), Postives = 117/191 (61.26%), Query Frame = 1
Query:    1 LIFSLARYEEVIDAYLDGLE--ASGLSDLSRVTSVASFFVSRVDTLIDKMLEKIGTPEALDLRGXXXXXXXXXXXXXXXXXFSG-PRWDALVKKGAKKQRLLWASTSVKNPAYPDTLYVAPLIGPDTVSTMPDQALQAFVDHGAV-SRTIDLNVSEAEGIYSALEKLGIDWNYVGT*LELEGVDSFKKSFD 561
            LIFS+ R+ EVIDAYL G+E  A    DLS++ SVASFFVSRVDT IDK LEK+G+ +AL LRG                 F G  R+  L+ +GA+ QR LWAST VKNP Y DTLYV  L+ P+TV+TMP+  + A  DHG +   TI      ++ ++ +L  +G+D   V   LE EGV  F KS++
Sbjct:  170 LIFSVQRHREVIDAYLAGIEKAAEAGRDLSKIVSVASFFVSRVDTEIDKRLEKLGSEQALALRGQAGVANARLAYAAYQKAFEGGQRYQTLMARGAQVQRPLWASTGVKNPDYADTLYVTELVAPNTVNTMPETTIDAVADHGVIRGDTISGTTLSSQKVFDSLVAVGVDLIDVFAVLEHEGVQKFVKSWN 360          
BLAST of CK739971 vs. ExPASy Swiss-Prot
Match: TAL_MYCLB (Transaldolase OS=Mycobacterium leprae (strain Br4923) GN=tal PE=3 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 5.898e-37
Identity = 90/191 (47.12%), Postives = 117/191 (61.26%), Query Frame = 1
Query:    1 LIFSLARYEEVIDAYLDGLE--ASGLSDLSRVTSVASFFVSRVDTLIDKMLEKIGTPEALDLRGXXXXXXXXXXXXXXXXXFSG-PRWDALVKKGAKKQRLLWASTSVKNPAYPDTLYVAPLIGPDTVSTMPDQALQAFVDHGAV-SRTIDLNVSEAEGIYSALEKLGIDWNYVGT*LELEGVDSFKKSFD 561
            LIFS+ R+ EVIDAYL G+E  A    DLS++ SVASFFVSRVDT IDK LEK+G+ +AL LRG                 F G  R+  L+ +GA+ QR LWAST VKNP Y DTLYV  L+ P+TV+TMP+  + A  DHG +   TI      ++ ++ +L  +G+D   V   LE EGV  F KS++
Sbjct:  170 LIFSVQRHREVIDAYLAGIEKAAEAGRDLSKIVSVASFFVSRVDTEIDKRLEKLGSEQALALRGQAGVANARLAYAAYQKAFEGGQRYQTLMARGAQVQRPLWASTGVKNPDYADTLYVTELVAPNTVNTMPETTIDAVADHGVIRGDTISGTTLSSQKVFDSLVAVGVDLIDVFAVLEHEGVQKFVKSWN 360          
BLAST of CK739971 vs. ExPASy Swiss-Prot
Match: TAL_ARTS2 (Transaldolase OS=Arthrobacter sp. (strain FB24) GN=tal PE=3 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 7.703e-37
Identity = 92/189 (48.68%), Postives = 113/189 (59.79%), Query Frame = 1
Query:    1 LIFSLARYEEVIDAYLDGLE-ASGLS-DLSRVTSVASFFVSRVDTLIDKMLEKIGTPEALDLRGXXXXXXXXXXXXXXXXXFSGPRWDALVKKGAKKQRLLWASTSVKNPAYPDTLYVAPLIGPDTVSTMPDQALQAFVDHGAVS-RTIDLNVSEAEGIYSALEKLGIDWNYVGT*LELEGVDSFKKSF 558
            LIFSL RY  VI+A+  GLE A G   DLS++ SVASFFVSRVD  IDK L+ IGT EA  L+G                 FS  RW  L + GA  QR LWAST VK+P+YPDTLYV  L+ P  V+TMP++ L A  DHG V+  T+     +A    +AL+ LGI +N V   LE EG+D F  S+
Sbjct:  165 LIFSLERYRAVINAFQSGLEQAKGNGHDLSKIHSVASFFVSRVDAEIDKRLDAIGTDEAKALKGKAGLANARLAYQVYEELFSTERWALLAEAGALPQRPLWASTGVKDPSYPDTLYVTELVAPGVVNTMPEKTLDATFDHGVVTGDTVTRGYDDANATLNALDALGISYNDVVALLESEGLDKFVASW 353          
BLAST of CK739971 vs. ExPASy Swiss-Prot
Match: TAL1_STRAW (Transaldolase 1 OS=Streptomyces avermitilis GN=tal1 PE=3 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 1.314e-36
Identity = 92/187 (49.20%), Postives = 115/187 (61.50%), Query Frame = 1
Query:    1 LIFSLARYEEVIDAYLDGLE---ASGLSDLSRVTSVASFFVSRVDTLIDKMLEKIGTPEALDLRGXXXXXXXXXXXXXXXXXFSGPRWDALVKKGAKKQRLLWASTSVKNPAYPDTLYVAPLIGPDTVSTMPDQALQAFVDHGAV-SRTIDLNVSEAEGIYSALEKLGIDWNYVGT*LELEGVDSFK 549
            LIFSL RY EV+DAYL GLE   A+G+ DL+ + SVASFFVSRVD+ IDK L K GT +A  L+G                 F+G RW AL   GA KQR LWAST VK+PAY DTLYV  L+ P TV+TMP+  L A  DHG +   T+    ++A    +A+E+LGI ++ V   LE E V  F+
Sbjct:  171 LIFSLERYREVMDAYLAGLERAQAAGI-DLAGIHSVASFFVSRVDSEIDKRLAKAGTDDAQALKGKAALANARLAYEAYEEVFAGERWTALAPAGAHKQRPLWASTGVKDPAYKDTLYVDELVAPGTVNTMPEGTLNATADHGDIHGDTVTGGYAQARADLAAVERLGISYDEVVKQLEDEAVAKFE 356          
BLAST of CK739971 vs. ExPASy Swiss-Prot
Match: TAL2_STRCO (Transaldolase 2 OS=Streptomyces coelicolor GN=tal2 PE=3 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 1.716e-36
Identity = 91/191 (47.64%), Postives = 117/191 (61.26%), Query Frame = 1
Query:    1 LIFSLARYEEVIDAYLDGLEAS---GLSDLSRVTSVASFFVSRVDTLIDKMLEKIGTPEALDLRGXXXXXXXXXXXXXXXXXFSGPRWDALVKKGAKKQRLLWASTSVKNPAYPDTLYVAPLIGPDTVSTMPDQALQAFVDHGAVS-RTIDLNVSEAEGIYSALEKLGIDWNYVGT*LELEGVDSFKKSFD 561
            LIFSL RY +V+DA+L GLE +   GL DLS++ SVASFFVSRVDT IDK ++ +GT EA   RG                 F   RW AL K GA KQR LWAST VK+ AY DT+YV  L+ P+TV+TMP+  L A  DHG ++   +  +   A     A+EKLGI ++ V   LE EGVD F+ +++
Sbjct:  165 LIFSLERYRKVMDAFLTGLEKAKERGL-DLSQIHSVASFFVSRVDTEIDKRIDALGTDEAKAQRGKAAVANARLAYQAYEEVFGTDRWAALEKAGANKQRPLWASTGVKDKAYSDTMYVTDLVAPNTVNTMPEATLLATEDHGEITGDAVAGSYERARADLDAIEKLGISYDEVVQLLEKEGVDKFEDAWN 354          
BLAST of CK739971 vs. ExPASy Swiss-Prot
Match: TAL1_STRCO (Transaldolase 1 OS=Streptomyces coelicolor GN=tal1 PE=3 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 1.112e-35
Identity = 91/190 (47.89%), Postives = 117/190 (61.58%), Query Frame = 1
Query:    1 LIFSLARYEEVIDAYLDGLE---ASGLSDLSRVTSVASFFVSRVDTLIDKMLEKIGTPEALDLRGXXXXXXXXXXXXXXXXXFSGPRWDALVKKGAKKQRLLWASTSVKNPAYPDTLYVAPLIGPDTVSTMPDQALQAFVDHGAV-SRTIDLNVSEAEGIYSALEKLGIDWNYVGT*LELEGVDSFKKSF 558
            LIFSL RY EV+DAYL GLE   A+G+ DL+ + SVASFFVSRVD+ IDK L  +GT EAL LRG                 F+G R+ AL    A  QR LWAST VK+PA+ DTLYV  L+ P TV+TMP+  L A  DHG V   T+    ++A    +A+E+LG+ ++ V   LE EGV  F+ ++
Sbjct:  174 LIFSLERYREVMDAYLAGLEKAQAAGI-DLAGIHSVASFFVSRVDSEIDKRLSLLGTEEALGLRGRAALANARLAYEAYENVFAGDRFTALAGARANAQRPLWASTGVKDPAFRDTLYVEELVAPGTVNTMPEATLDAAADHGDVRGDTVTGGYAQARADLAAVERLGVSYDEVVEQLEQEGVAKFEAAW 362          
BLAST of CK739971 vs. ExPASy Swiss-Prot
Match: TAL_MYCTU (Transaldolase OS=Mycobacterium tuberculosis GN=tal PE=3 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 1.453e-35
Identity = 87/191 (45.55%), Postives = 117/191 (61.26%), Query Frame = 1
Query:    1 LIFSLARYEEVIDAYLDGLEASGLS--DLSRVTSVASFFVSRVDTLIDKMLEKIGTPEALDLRGXXXXXXXXXXXXXXXXXFS-GPRWDALVKKGAKKQRLLWASTSVKNPAYPDTLYVAPLIGPDTVSTMPDQALQAFVDHGAV-SRTIDLNVSEAEGIYSALEKLGIDWNYVGT*LELEGVDSFKKSFD 561
            LIFS+ RY EV+DAYL G+E +  +   LS++ SVASFFVSRVDT IDK L++IG+ +AL+LRG                 F    R+ +L   GA+ QR LWAST VKNP Y DTLYV  L+ P TV+TMP++ + A  DHG +   T+    S+A+ ++  L  +GID   V   LE EGV  F+ S++
Sbjct:  168 LIFSVQRYREVMDAYLTGMEKARQAGHSLSKIHSVASFFVSRVDTEIDKRLDRIGSRQALELRGQAGVANARLAYATYREVFEDSDRYRSLKVDGARVQRPLWASTGVKNPDYSDTLYVTELVAPHTVNTMPEKTIDAVADHGVIQGDTVTGTASDAQAVFDQLGAIGIDLTDVFAVLEEEGVRKFEASWN 358          
BLAST of CK739971 vs. ExPASy Swiss-Prot
Match: TAL_MYCTA (Transaldolase OS=Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) GN=tal PE=3 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 1.453e-35
Identity = 87/191 (45.55%), Postives = 117/191 (61.26%), Query Frame = 1
Query:    1 LIFSLARYEEVIDAYLDGLEASGLS--DLSRVTSVASFFVSRVDTLIDKMLEKIGTPEALDLRGXXXXXXXXXXXXXXXXXFS-GPRWDALVKKGAKKQRLLWASTSVKNPAYPDTLYVAPLIGPDTVSTMPDQALQAFVDHGAV-SRTIDLNVSEAEGIYSALEKLGIDWNYVGT*LELEGVDSFKKSFD 561
            LIFS+ RY EV+DAYL G+E +  +   LS++ SVASFFVSRVDT IDK L++IG+ +AL+LRG                 F    R+ +L   GA+ QR LWAST VKNP Y DTLYV  L+ P TV+TMP++ + A  DHG +   T+    S+A+ ++  L  +GID   V   LE EGV  F+ S++
Sbjct:  168 LIFSVQRYREVMDAYLTGMEKARQAGHSLSKIHSVASFFVSRVDTEIDKRLDRIGSRQALELRGQAGVANARLAYATYREVFEDSDRYRSLKVDGARVQRPLWASTGVKNPDYSDTLYVTELVAPHTVNTMPEKTIDAVADHGVIQGDTVTGTASDAQAVFDQLGAIGIDLTDVFAVLEEEGVRKFEASWN 358          
BLAST of CK739971 vs. ExPASy Swiss-Prot
Match: TAL_MYCBT (Transaldolase OS=Mycobacterium bovis (strain BCG / Tokyo 172 / ATCC 35737 / TMC 1019) GN=tal PE=3 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 1.453e-35
Identity = 87/191 (45.55%), Postives = 117/191 (61.26%), Query Frame = 1
Query:    1 LIFSLARYEEVIDAYLDGLEASGLS--DLSRVTSVASFFVSRVDTLIDKMLEKIGTPEALDLRGXXXXXXXXXXXXXXXXXFS-GPRWDALVKKGAKKQRLLWASTSVKNPAYPDTLYVAPLIGPDTVSTMPDQALQAFVDHGAV-SRTIDLNVSEAEGIYSALEKLGIDWNYVGT*LELEGVDSFKKSFD 561
            LIFS+ RY EV+DAYL G+E +  +   LS++ SVASFFVSRVDT IDK L++IG+ +AL+LRG                 F    R+ +L   GA+ QR LWAST VKNP Y DTLYV  L+ P TV+TMP++ + A  DHG +   T+    S+A+ ++  L  +GID   V   LE EGV  F+ S++
Sbjct:  168 LIFSVQRYREVMDAYLTGMEKARQAGHSLSKIHSVASFFVSRVDTEIDKRLDRIGSRQALELRGQAGVANARLAYAAYREVFEDSDRYRSLKVDGARVQRPLWASTGVKNPDYSDTLYVTELVAPHTVNTMPEKTIDAVADHGVIQGDTVTGTASDAQAVFDQLGAIGIDLTDVFAVLEEEGVRKFEASWN 358          
The following BLAST results are available for this feature:
BLAST of CK739971 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 36
Match NameE-valueIdentityDescription
TAL_MYCMM5.898e-3747.89Transaldolase OS=Mycobacterium marinum (strain ATC... [more]
TAL_MYCLE5.898e-3747.12Transaldolase OS=Mycobacterium leprae GN=tal PE=3 ... [more]
TAL_MYCLB5.898e-3747.12Transaldolase OS=Mycobacterium leprae (strain Br49... [more]
TAL_ARTS27.703e-3748.68Transaldolase OS=Arthrobacter sp. (strain FB24) GN... [more]
TAL1_STRAW1.314e-3649.20Transaldolase 1 OS=Streptomyces avermitilis GN=tal... [more]
TAL2_STRCO1.716e-3647.64Transaldolase 2 OS=Streptomyces coelicolor GN=tal2... [more]
TAL1_STRCO1.112e-3547.89Transaldolase 1 OS=Streptomyces coelicolor GN=tal1... [more]
TAL_MYCTU1.453e-3545.55Transaldolase OS=Mycobacterium tuberculosis GN=tal... [more]
TAL_MYCTA1.453e-3545.55Transaldolase OS=Mycobacterium tuberculosis (strai... [more]
TAL_MYCBT1.453e-3545.55Transaldolase OS=Mycobacterium bovis (strain BCG /... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_6793 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE68F12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK739971 ID=CK739971; Name=CK739971; organism=Citrus sinensis; type=EST; length=565bp
CTCATATTCTCCCTGGCTAGATATGAAGAAGTCATTGATGCTTACTTGGA
TGGCCTTGAGGCTTCTGGGCTGAGTGACCTTTCCAGAGTTACAAGTGTTG
CATCCTTTTTCGTTAGTCGAGTAGACACCCTTATTGACAAAATGCTTGAA
AAGATTGGAACCCCAGAAGCCCTAGATCTCCGAGGAAAGGCAGCAGTAGC
TCAGGCAGCTCTAGCATACCAGCTGTACCAGAAGAAGTTCTCTGGTCCAA
GATGGGACGCTCTTGTGAAGAAAGGTGCAAAGAAGCAGAGACTTCTGTGG
GCCTCAACCAGTGTAAAGAATCCTGCCTACCCTGACACTCTATATGTTGC
TCCTCTCATTGGACCTGATACGGTTTCAACCATGCCAGACCAAGCTCTCC
AAGCATTTGTTGATCATGGTGCAGTTTCAAGAACAATTGACTTGAATGTT
TCTGAGGCTGAAGGCATTTACAGTGCACTGGAGAAGTTGGGAATTGATTG
GAACTACGTTGGCACTTAACTCGAACTTGAAGGGGTAGATTCTTTCAAGA
AGAGCTTTGATAGTC
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