CK739983
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK739983 vs. ExPASy Swiss-Prot
Match: RL27_CANAL (60S ribosomal protein L27 OS=Candida albicans GN=RPL27 PE=2 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 1.333e-23 Identity = 55/112 (49.11%), Postives = 74/112 (66.07%), Query Frame = 2 Query: 137 IVKSFDDRTRERPNGHCLVAGIKK*PGKVIHKDSAKKTAK*SRVKAFVKLVSYQHLMPTRYTLDVD-LKVVVTADSLQSKDKKMIACKETKKRLEERFKTSKNRWFFTKLRF 469 IVK D+ T+ P H +VAGI++ P KV K AKK K ++VK FVKLV+Y HLMPTRY+LDV+ K VT+++L+ ++ A K KK EE+ + KN+WFF KL F Sbjct: 25 IVKPHDEGTKSHPFPHAIVAGIERAPLKVTKKMDAKKVTKRTKVKPFVKLVNYNHLMPTRYSLDVESFKSAVTSEALEEPSQREEAKKVVKKAFEEKHQAGKNKWFFQKLHF 136 HSP 2 Score: 23.483 bits (49), Expect = 1.333e-23 Identity = 9/18 (50.00%), Postives = 13/18 (72.22%), Query Frame = 3 Query: 84 FLKPNKTVILL*GRYAGR 137 F+K K I++ GRYAG+ Sbjct: 4 FIKSGKVAIVVRGRYAGK 21
BLAST of CK739983 vs. ExPASy Swiss-Prot
Match: RL27A_SCHPO (60S ribosomal protein L27-A OS=Schizosaccharomyces pombe GN=rpl27a PE=2 SV=2) HSP 1 Score: 103.99 bits (258), Expect = 8.422e-23 Identity = 50/112 (44.64%), Postives = 77/112 (68.75%), Query Frame = 2 Query: 137 IVKSFDDRTRERPNGHCLVAGIKK*PGKVIHKDSAKKTAK*SRVKAFVKLVSYQHLMPTRYTLDVD-LKVVVTADSLQSKDKKMIACKETKKRLEERFKTSKNRWFFTKLRF 469 I+++ D ++ P GH +VAG+++ P KV AK+ A+ SRVK F+K+V+Y HLMPTRY L++D LK ++TAD+ + ++ A K KK EE++++ K+ WFFT LRF Sbjct: 25 ILQAIDQGSKSHPFGHAVVAGVERYPLKVTKSMGAKRIARRSRVKPFIKVVNYNHLMPTRYALELDNLKGLITADTFKEPTQRSAARKTVKKTFEEKYQSGKSAWFFTPLRF 136 HSP 2 Score: 22.3274 bits (46), Expect = 8.422e-23 Identity = 8/17 (47.06%), Postives = 12/17 (70.59%), Query Frame = 3 Query: 87 LKPNKTVILL*GRYAGR 137 LKP K ++ GR+AG+ Sbjct: 5 LKPGKVALITRGRFAGK 21
BLAST of CK739983 vs. ExPASy Swiss-Prot
Match: RL27_CAEEL (60S ribosomal protein L27 OS=Caenorhabditis elegans GN=rpl-27 PE=2 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 1.855e-22 Identity = 50/112 (44.64%), Postives = 72/112 (64.29%), Query Frame = 2 Query: 137 IVKSFDDRTRERPNGHCLVAGIKK*PGKVIHKDSAKKTAK*SRVKAFVKLVSYQHLMPTRYTLDVDL-KVVVTADSLQSKDKKMIACKETKKRLEERFKTSKNRWFFTKLRF 469 +VK D+ +R H ++AGI + P KV KK K +++K F+K+VSY HL+PTRY++DV K + ++L++ KK A E K + EER+KT KN+WFFTKLRF Sbjct: 25 VVKQQDEGVSDRTYPHAIIAGIDRYPLKVTKDMGKKKIEKRNKLKPFLKVVSYTHLLPTRYSVDVAFDKTNINKEALKAPSKKRKALVEVKSKFEERYKTGKNKWFFTKLRF 136 HSP 2 Score: 26.1794 bits (56), Expect = 1.855e-22 Identity = 10/17 (58.82%), Postives = 14/17 (82.35%), Query Frame = 3 Query: 87 LKPNKTVILL*GRYAGR 137 +KP K V++L G+YAGR Sbjct: 5 MKPGKVVLVLRGKYAGR 21
BLAST of CK739983 vs. ExPASy Swiss-Prot
Match: RL27B_SCHPO (60S ribosomal protein L27-B OS=Schizosaccharomyces pombe GN=rpl27b PE=2 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.982e-21 Identity = 49/112 (43.75%), Postives = 73/112 (65.18%), Query Frame = 2 Query: 137 IVKSFDDRTRERPNGHCLVAGIKK*PGKVIHKDSAKKTAK*SRVKAFVKLVSYQHLMPTRYTLDVD-LKVVVTADSLQSKDKKMIACKETKKRLEERFKTSKNRWFFTKLRF 469 I+++ D ++ P GH +VAG+++ P KV AK+ AK SRVK F+K+++Y HLMPTRY L++D LK +VT + ++ A K K EE+++T K+ WFFT LRF Sbjct: 25 ILQNVDQGSKSHPFGHAVVAGVERYPLKVTKSMGAKRIAKRSRVKPFIKVINYNHLMPTRYALELDNLKGLVTPTTFSEPSQRSAAKKTVKNTFEEKYQTGKSAWFFTPLRF 136 HSP 2 Score: 21.9422 bits (45), Expect = 1.982e-21 Identity = 8/17 (47.06%), Postives = 12/17 (70.59%), Query Frame = 3 Query: 87 LKPNKTVILL*GRYAGR 137 LKP K ++ GR+AG+ Sbjct: 5 LKPGKVALVTRGRFAGK 21
BLAST of CK739983 vs. ExPASy Swiss-Prot
Match: RL27_DICDI (60S ribosomal protein L27 OS=Dictyostelium discoideum GN=rpl27 PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 9.602e-21 Identity = 50/120 (41.67%), Postives = 70/120 (58.33%), Query Frame = 2 Query: 137 IVKSFDDRT--RERPNGHCLVAGIKK*PGKVIHKDSAKKTAK*SRVKAFVKLVSYQHLMPTRYTLD-------VDLKVVVTADSLQSKDKKMIACKETKKRLEERFKTSKNRWFFTKLRF 469 ++K+FDD T + RP GHCLVAGI K P ++ S K K + +++FVK+V+Y H+MPTRY + LK VT +S Q K+ KK E + K K++WFF+KLRF Sbjct: 26 VIKTFDDATASKSRPYGHCLVAGIDKYPRSIVRSMSRKTILKRTAIRSFVKVVNYNHIMPTRYNFEGRDESAFTGLKNTVTVESSQVA-KRAHTRLAVKKIFEAKHKAGKSKWFFSKLRF 144 HSP 2 Score: 28.8758 bits (63), Expect = 9.602e-21 Identity = 12/18 (66.67%), Postives = 15/18 (83.33%), Query Frame = 3 Query: 84 FLKPNKTVILL*GRYAGR 137 F+KP + VILL G+YAGR Sbjct: 5 FIKPGRLVILLNGKYAGR 22 The following BLAST results are available for this feature:
BLAST of CK739983 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 25
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CK739983 ID=CK739983; Name=CK739983; organism=Citrus sinensis; type=EST; length=508bpback to top |