CK739988
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK739988 vs. ExPASy Swiss-Prot
Match: UB2R1_HUMAN (Ubiquitin-conjugating enzyme E2 R1 OS=Homo sapiens GN=CDC34 PE=1 SV=2) HSP 1 Score: 60.077 bits (144), Expect = 1.369e-14 Identity = 30/66 (45.45%), Postives = 37/66 (56.06%), Query Frame = 1 Query: 76 GRVCISILHPPGDDPNGYELASERWMPVHTVEXXXXXXXXXXXXPNDESPANVEAA---KEWRDRR 264 G VCISILHPP DDP EL SERW P V PN SPANV+A+ ++W++ + Sbjct: 90 GDVCISILHPPVDDPQSGELPSERWNPTQNVRTILLSVISLLNEPNTFSPANVDASVMYRKWKESK 155 HSP 2 Score: 39.6614 bits (91), Expect = 1.369e-14 Identity = 15/30 (50.00%), Postives = 21/30 (70.00%), Query Frame = 3 Query: 6 NYPNSPPTVKFTTEIWHPNVYPDGP-CLHI 92 +YP SPP +F T++WHPN+Y G C+ I Sbjct: 67 DYPYSPPAFRFLTKMWHPNIYETGDVCISI 96
BLAST of CK739988 vs. ExPASy Swiss-Prot
Match: UBC3_YEAST (Ubiquitin-conjugating enzyme E2-34 kDa OS=Saccharomyces cerevisiae GN=CDC34 PE=1 SV=1) HSP 1 Score: 61.6178 bits (148), Expect = 3.872e-14 Identity = 35/81 (43.21%), Postives = 46/81 (56.79%), Query Frame = 1 Query: 70 RMGRVCISILHPPGDDPNGYELASERWMPVHTVEXXXXXXXXXXXXPNDESPANVEAAKEWRDRRDDFKKKVGRCVRRSQE 312 R GR+CISILH GD P E +E W PV TVE PN SPANV+AA ++R + +K++V V RS++ Sbjct: 90 RDGRLCISILHQSGD-PMTDEPDAETWSPVQTVESVLISIVSLLEDPNINSPANVDAAVDYRKNPEQYKQRVKMEVERSKQ 169 HSP 2 Score: 36.5798 bits (83), Expect = 3.872e-14 Identity = 14/24 (58.33%), Postives = 18/24 (75.00%), Query Frame = 3 Query: 6 NYPNSPPTVKFTTEIWHPNVYPDG 77 ++P SPP +FT I+HPNVY DG Sbjct: 69 DFPFSPPQFRFTPAIYHPNVYRDG 92
BLAST of CK739988 vs. ExPASy Swiss-Prot
Match: UBC_ASFK5 (Ubiquitin-conjugating enzyme E2 OS=African swine fever virus (isolate Pig/Kenya/KEN-50/1950) GN=UBC PE=2 SV=1) HSP 1 Score: 46.9802 bits (110), Expect = 4.339e-12 Identity = 16/24 (66.67%), Postives = 20/24 (83.33%), Query Frame = 3 Query: 6 NYPNSPPTVKFTTEIWHPNVYPDG 77 NYP PP + FT+E+WHPN+YPDG Sbjct: 59 NYPYEPPKLTFTSEMWHPNIYPDG 82 HSP 2 Score: 44.2838 bits (103), Expect = 4.339e-12 Identity = 26/82 (31.71%), Postives = 39/82 (47.56%), Query Frame = 1 Query: 76 GRVCISILHPPGDDPNGYELASERWMPVHTVEXXXXXXXXXXXXPNDESPANVEAAKEWR-----DRRDDFKKKVGRCVRRS 306 GR+CISILH + G W P +E PN +SPANV+AAK +R + + + +V + V++S Sbjct: 82 GRLCISILHTDNVEERGMT-----WSPAQKIETVLLSVISLFNEPNTDSPANVDAAKSYRKLMHKEDLESYPMEVKKTVKKS 158
BLAST of CK739988 vs. ExPASy Swiss-Prot
Match: UBC_ASFP4 (Ubiquitin-conjugating enzyme E2 OS=African swine fever virus (isolate Tick/South Africa/Pretoriuskop Pr4/1996) GN=UBC PE=2 SV=1) HSP 1 Score: 46.9802 bits (110), Expect = 5.634e-12 Identity = 28/82 (34.15%), Postives = 40/82 (48.78%), Query Frame = 1 Query: 76 GRVCISILHPPGDDPNGYELASERWMPVHTVEXXXXXXXXXXXXPNDESPANVEAAKEWR-----DRRDDFKKKVGRCVRRS 306 GRVCISILH + G W PV ++ PN +SPANV+AAK +R + + + +V R V++S Sbjct: 82 GRVCISILHGDNAEEQGMT-----WSPVQKIDTILLSVISLLNEPNTDSPANVDAAKSYRRFVHKEDLESYPMEVKRTVKKS 158 HSP 2 Score: 43.8986 bits (102), Expect = 5.634e-12 Identity = 15/24 (62.50%), Postives = 19/24 (79.17%), Query Frame = 3 Query: 6 NYPNSPPTVKFTTEIWHPNVYPDG 77 NYP PP + FT+E+WHPN+Y DG Sbjct: 59 NYPYEPPRLTFTSEMWHPNIYSDG 82
BLAST of CK739988 vs. ExPASy Swiss-Prot
Match: UBC_ASFWA (Ubiquitin-conjugating enzyme E2 OS=African swine fever virus (isolate Warthog/Namibia/Wart80/1980) GN=UBC PE=2 SV=1) HSP 1 Score: 45.4394 bits (106), Expect = 2.698e-11 Identity = 17/29 (58.62%), Postives = 23/29 (79.31%), Query Frame = 3 Query: 9 YPNSPPTVKFTTEIWHPNVYPDGP-CLHI 92 YP +PP + FT+E+WHPN+YPDG C+ I Sbjct: 60 YPYAPPRLTFTSEMWHPNIYPDGKLCISI 88 HSP 2 Score: 43.1282 bits (100), Expect = 2.698e-11 Identity = 25/82 (30.49%), Postives = 39/82 (47.56%), Query Frame = 1 Query: 76 GRVCISILHPPGDDPNGYELASERWMPVHTVEXXXXXXXXXXXXPNDESPANVEAAKEWR-----DRRDDFKKKVGRCVRRS 306 G++CISILH + G W P ++ PN +SPANV+AAK +R + + + +V R V++S Sbjct: 82 GKLCISILHGDNAEEQGMT-----WSPAQKIDTILLSVISLLNEPNPDSPANVDAAKSYRKLMHKEDLESYPMEVKRTVKKS 158
BLAST of CK739988 vs. ExPASy Swiss-Prot
Match: UBC_ASFB7 (Ubiquitin-conjugating enzyme E2 OS=African swine fever virus (strain Badajoz 1971 Vero-adapted) GN=UBC PE=2 SV=1) HSP 1 Score: 45.0542 bits (105), Expect = 3.508e-11 Identity = 15/23 (65.22%), Postives = 20/23 (86.96%), Query Frame = 3 Query: 9 YPNSPPTVKFTTEIWHPNVYPDG 77 YP +PP + FT+E+WHPN+YPDG Sbjct: 60 YPYAPPKLTFTSEMWHPNIYPDG 82 HSP 2 Score: 43.1282 bits (100), Expect = 3.508e-11 Identity = 25/82 (30.49%), Postives = 39/82 (47.56%), Query Frame = 1 Query: 76 GRVCISILHPPGDDPNGYELASERWMPVHTVEXXXXXXXXXXXXPNDESPANVEAAKEWR-----DRRDDFKKKVGRCVRRS 306 GR+CISILH + G W P ++ PN +SPANV+AAK +R + + + +V + V++S Sbjct: 82 GRLCISILHGDNAEEQGMT-----WSPAQKIDTILLSVISLLNEPNPDSPANVDAAKSYRKYVYKEDLESYPMEVKKTVKKS 158
BLAST of CK739988 vs. ExPASy Swiss-Prot
Match: Y1A1_ENCCU (Probable ubiquitin-conjugating enzyme E2 ECU01_1010 OS=Encephalitozoon cuniculi GN=ECU01_1010 PE=1 SV=1) HSP 1 Score: 46.595 bits (109), Expect = 7.669e-11 Identity = 26/82 (31.71%), Postives = 40/82 (48.78%), Query Frame = 1 Query: 76 GRVCISILHPPGD-DPNGYELASERWMPVHTVEXXXXXXXXXXXXPNDESPANVEAAKEWRDRRDDFKKKVGRCVRRSQEML 318 G++CISIL D + + ++W PV + PN SPANV+A+ +RD +++ K+V R R E L Sbjct: 117 GKMCISILEEDKQQDSSVFGDPKDKWTPVQNIRTIVMSIVVILNSPNISSPANVDASVMYRDNPEEYIKEVIRIAREEDEKL 198 HSP 2 Score: 40.4318 bits (93), Expect = 7.669e-11 Identity = 16/31 (51.61%), Postives = 24/31 (77.42%), Query Frame = 3 Query: 3 SNYPNSPPTVKFTTEIWHPNVYPDGP-CLHI 92 S+YP PPT+KF ++++HPN+Y DG C+ I Sbjct: 93 SSYPLRPPTLKFVSKMFHPNIYEDGKMCISI 123 The following BLAST results are available for this feature:
BLAST of CK739988 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 27
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CK739988 ID=CK739988; Name=CK739988; organism=Citrus sinensis; type=EST; length=484bpback to top |