CK740010

Overview
NameCK740010
Unique NameCK740010
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length594
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1436 contig Csv1_Contig1436:1..594. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK740010 vs. ExPASy Swiss-Prot
Match: GSTX3_SOYBN (Glutathione S-transferase 3 OS=Glycine max GN=GST3 PE=1 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 3.677e-32
Identity = 70/162 (43.21%), Postives = 95/162 (58.64%), Query Frame = 2
Query:   65 EEVKLYGTWVSPFSRRIELALKLKGVPFEYIEVDLSNKSPELLKYNPIHKKIPVLVHNGKSIVESLIILEYIDDKWKN-NPILPRDPHQRAVARFWAKFIDEKLLATGMKASXXXXXXXXXXXXXXXXQMKLLENELNGKDFFGGEAIGLVDIVATVVAFWF 547
            +EV L  TW S +  R  +AL  KGV +EY E +L N+SP LL+ NPIHKKIPVL+HNGK I ES II++YID+ W + +P++P DP++R+ ARFW  +ID+K+  T  K                    K LE  L  K F+G +  G VD+     + WF
Sbjct:    3 DEVVLLDTWASMYGMRARIALAEKGVRYEYKEENLMNRSPLLLQMNPIHKKIPVLIHNGKPICESAIIVQYIDEVWNDKSPLMPSDPYKRSQARFWVDYIDKKIYDTWKKMWLSKGEEHEEGKKELISIFKQLEETLTDKPFYGDDTFGFVDLCLITFSSWF 164          
BLAST of CK740010 vs. ExPASy Swiss-Prot
Match: GSTU6_ORYSJ (Probable glutathione S-transferase GSTU6 OS=Oryza sativa subsp. japonica GN=GSTU6 PE=2 SV=2)

HSP 1 Score: 128.642 bits (322), Expect = 2.231e-29
Identity = 65/183 (35.52%), Postives = 100/183 (54.64%), Query Frame = 2
Query:   68 EVKLYGTWVSPFSRRIELALKLKGVPFEYIEVDLSNKSPELLKYNPIHKKIPVLVHNGKSIVESLIILEYIDDKWKNN-----PILPRDPHQRAVARFWAKFIDEKL------LATGMKASXXXXXXXXXXXXXXXXQMKLLENELNGKDFFGGEAIGLVDIVATVVAFWFPISHEVLGVEVI 583
            E+KL G W SP++ R+ + L LK +P+EY+E +L +KS  LL  NP+HK +PVL+H G+ + ES +I++YID+ W         ++P DP++RAVARFWA ++D+K+      +  G K                            GK FFGG+ +G VD+V      WF    +++G  +I
Sbjct:    6 ELKLLGVWSSPYAIRVRVVLNLKSLPYEYVEENLGDKSDLLLASNPVHKSVPVLLHAGRPVNESQVIVQYIDEVWPGGAGGRPSVMPSDPYERAVARFWAAYVDDKVRPAWLAILFGSKTEEERAAAVAQAVAALETLEGAFGECSKGKPFFGGDGVGFVDVVLGGYLGWFTAIDKLIGRRLI 188          
BLAST of CK740010 vs. ExPASy Swiss-Prot
Match: GSTU1_ORYSJ (Probable glutathione S-transferase GSTU1 OS=Oryza sativa subsp. japonica GN=GSTU1 PE=1 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 9.373e-28
Identity = 71/176 (40.34%), Postives = 97/176 (55.11%), Query Frame = 2
Query:   56 MAEE-EVKLYGTWVSPFSRRIELALKLKGVPFEYIEVDLSNKSPELLKYNPIHKKIPVLVHNGKSIVESLIILEYIDDKWKNNP-ILP-------RDPHQRAVARFWAKFIDEKLLATGMKASXXXXXXXXXXXXXXXXQMKLLENELNGKDFFGGEA---IGLVDIVATVVAFWF 547
            MAEE E+ L   WVSPF +R  +A+  KG+ FEY E DL NKS  LL+ NP+H+KIPVL+H G+ + ESL+IL+Y+DD +   P +LP          + RA ARFWA ++D KL   G +                   ++ LE EL  ++FFGG     +G VD+       WF
Sbjct:    1 MAEEKELVLLDFWVSPFGQRCRIAMAEKGLEFEYREEDLGNKSDLLLRSNPVHRKIPVLLHAGRPVSESLVILQYLDDAFPGTPHLLPPANSGDADAAYARATARFWADYVDRKLYDCGSRLWRLKGEPQAAAGREMAEILRTLEAELGDREFFGGGGGGRLGFVDVALVPFTAWF 176          
BLAST of CK740010 vs. ExPASy Swiss-Prot
Match: GSTU1_ORYSI (Probable glutathione S-transferase GSTU1 OS=Oryza sativa subsp. indica GN=GSTU1 PE=2 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 1.224e-27
Identity = 71/176 (40.34%), Postives = 97/176 (55.11%), Query Frame = 2
Query:   56 MAEE-EVKLYGTWVSPFSRRIELALKLKGVPFEYIEVDLSNKSPELLKYNPIHKKIPVLVHNGKSIVESLIILEYIDDKWKNNPIL--PRD------PHQRAVARFWAKFIDEKLLATGMKASXXXXXXXXXXXXXXXXQMKLLENELNGKDFFGGEA---IGLVDIVATVVAFWF 547
            MAEE E+ L   WVSPF +R  +A+  KG+ FEY E DL NKS  LL+ NP+H+KIPVL+H G+ + ESL+IL+Y+DD +   P L  P +       + RA ARFWA ++D KL   G +                   ++ LE EL  ++FFGG     +G VD+       WF
Sbjct:    1 MAEEKELVLLDFWVSPFGQRCRIAMAEKGLEFEYREEDLGNKSDLLLRSNPVHRKIPVLLHAGRPVSESLVILQYLDDAFPGTPHLLSPANSGDADAAYARATARFWADYVDRKLYDCGSRLWRLKGEPQAAAGREMAEILRTLEAELGDREFFGGGGGGRLGFVDVALVPFTAWF 176          
BLAST of CK740010 vs. ExPASy Swiss-Prot
Match: GSTX2_MAIZE (Probable glutathione S-transferase BZ2 OS=Zea mays GN=BZ2 PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 8.231e-16
Identity = 59/166 (35.54%), Postives = 90/166 (54.22%), Query Frame = 2
Query:   71 VKLYGTWVSPFSRRIELALKLKGVPFEYIEVDLS-NKSPELLKYNPIHKKIPVLV-HNGKSIVESLIILEYIDDKWKNNP-------ILPRDPHQRAVARFWAKFIDEKLL-ATGMKASXXXXXXXXXXXXXXXXQMKLLE----NELNGKDFFGG--EAIGLVDI 520
            +++ G  VSPF+ R  LAL L+GV +E ++  L   KS  LL  NP++ KIPVL+  +G++I ES +I++YI+D  + +        +LP DP++RA+ RFW  FID+K   A    +                  + LLE    +  NG+ FF G   A GL+D+
Sbjct:    1 MRVLGGEVSPFTARARLALDLRGVAYELLDEPLGPKKSDRLLAANPVYGKIPVLLLPDGRAICESAVIVQYIEDVARESGGAEAGSLLLPDDPYERAMHRFWTAFIDDKFWPALDAVSLAPTPGARAQAAEDTRAALSLLEEAFKDRSNGRAFFSGGDAAPGLLDL 166          
BLAST of CK740010 vs. ExPASy Swiss-Prot
Match: GSTZ1_DIACA (Glutathione S-transferase 1 OS=Dianthus caryophyllus GN=GST1 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.897e-12
Identity = 39/94 (41.49%), Postives = 62/94 (65.96%), Query Frame = 2
Query:   65 EEVKLYGTWVSPFSRRIELALKLKGVPFEYIEVDL---SNKSPELLKYNPIHKKIPVLVHNGKSIVESLIILEYIDDKWKNNPILPRDPHQRAV 337
            ++++LY   +S  + R+ +AL LKG+ FEY  VDL    + +PE LK NP+   +PVLVH    I +SL I+ Y+++K+  NP+LP+D  +RA+
Sbjct:    7 QKMQLYSFSLSSCAWRVRIALHLKGLDFEYKAVDLFKGEHLTPEFLKLNPLGY-VPVLVHGDIVIADSLAIIMYLEEKFPENPLLPQDLQKRAL 99          
BLAST of CK740010 vs. ExPASy Swiss-Prot
Match: GSTZ2_DIACA (Glutathione S-transferase 2 (Fragment) OS=Dianthus caryophyllus GN=GST2 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 4.227e-12
Identity = 39/94 (41.49%), Postives = 60/94 (63.83%), Query Frame = 2
Query:   65 EEVKLYGTWVSPFSRRIELALKLKGVPFEYIEVDL---SNKSPELLKYNPIHKKIPVLVHNGKSIVESLIILEYIDDKWKNNPILPRDPHQRAV 337
            ++++LY    S  + R+ +AL LKG+ FEY  VDL    + +PE LK NP+   +P LVH    I +SL I+ Y+++K+  NP+LPRD  +RA+
Sbjct:    7 QKMQLYSYSSSSCAWRVRIALHLKGLDFEYKAVDLLKGEHLTPEFLKLNPLGY-VPALVHGDIVIADSLAIIMYLEEKFPENPLLPRDLQKRAL 99          
BLAST of CK740010 vs. ExPASy Swiss-Prot
Match: GSTZ1_ARATH (Glutathione S-transferase zeta-class 1 OS=Arabidopsis thaliana GN=GST18 PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 4.227e-12
Identity = 39/95 (41.05%), Postives = 57/95 (60.00%), Query Frame = 2
Query:   62 EEEVKLYGTWVSPFSRRIELALKLKGVPFEYIEVDL---SNKSPELLKYNPIHKKIPVLVHNGKSIVESLIILEYIDDKWKNNPILPRDPHQRAV 337
            EE++KLY  W S  + R+ +AL LKG+ +EYI V+L        +  K NP+   +P LV     I +S  I+ Y+D+K+   P+LPRD H+RAV
Sbjct:    6 EEKLKLYSYWRSSCAHRVRIALALKGLDYEYIPVNLLKGDQFDSDFKKINPM-GTVPALVDGDVVINDSFAIIMYLDEKYPEPPLLPRDLHKRAV 99          
BLAST of CK740010 vs. ExPASy Swiss-Prot
Match: MAAI_CAEEL (Probable maleylacetoacetate isomerase OS=Caenorhabditis elegans GN=gst-42 PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 9.417e-12
Identity = 40/98 (40.82%), Postives = 61/98 (62.24%), Query Frame = 2
Query:   56 MAEEEVKLYGTWVSPFSRRIELALKLKGVPFEYIEVDLSNKSPE--LLKYNPIHKKIPVLVHNGKSIVESLIILEYIDDKWKNNPILPRDPHQRAVAR 343
            M+ ++  LY  W S  S R+ +AL LK V +EY  VDL ++  +  L + NP   K+P  V +G+ I ESL I+EY+++   + P+LP+DP +RA AR
Sbjct:    1 MSNQKPVLYSYWRSSCSWRVRIALALKNVDYEYKTVDLLSEEAKSKLKEINPA-AKVPTFVVDGQVITESLAIIEYLEETHPDVPLLPKDPIKRAHAR 97          
BLAST of CK740010 vs. ExPASy Swiss-Prot
Match: GSTZ_EUPES (Glutathione S-transferase zeta class OS=Euphorbia esula PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.606e-11
Identity = 42/110 (38.18%), Postives = 65/110 (59.09%), Query Frame = 2
Query:   17 MISVKRPWQKL*LMAEEEVKLYGTWVSPFSRRIELALKLKGVPFEYIEVDL---SNKSPELLKYNPIHKKIPVLVHNGKSIVESLIILEYIDDKWKNNPILPRDPHQRAV 337
            M SV++P        + ++KLY  + S  S R+ +AL LKG+ +EY+ V+L      +PE LK NPI   +P LV     I +S  IL Y+++K+  +PILP D H++A+
Sbjct:    1 MASVEQP-------NKPKLKLYSYFRSSCSFRVRIALNLKGLDYEYVPVNLLKGEQFTPEFLKINPIGY-VPALVDGEDVISDSFAILMYLEEKYPEHPILPADIHKKAI 102          
The following BLAST results are available for this feature:
BLAST of CK740010 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 24
Match NameE-valueIdentityDescription
GSTX3_SOYBN3.677e-3243.21Glutathione S-transferase 3 OS=Glycine max GN=GST3... [more]
GSTU6_ORYSJ2.231e-2935.52Probable glutathione S-transferase GSTU6 OS=Oryza ... [more]
GSTU1_ORYSJ9.373e-2840.34Probable glutathione S-transferase GSTU1 OS=Oryza ... [more]
GSTU1_ORYSI1.224e-2740.34Probable glutathione S-transferase GSTU1 OS=Oryza ... [more]
GSTX2_MAIZE8.231e-1635.54Probable glutathione S-transferase BZ2 OS=Zea mays... [more]
GSTZ1_DIACA1.897e-1241.49Glutathione S-transferase 1 OS=Dianthus caryophyll... [more]
GSTZ2_DIACA4.227e-1241.49Glutathione S-transferase 2 (Fragment) OS=Dianthus... [more]
GSTZ1_ARATH4.227e-1241.05Glutathione S-transferase zeta-class 1 OS=Arabidop... [more]
MAAI_CAEEL9.417e-1240.82Probable maleylacetoacetate isomerase OS=Caenorhab... [more]
GSTZ_EUPES1.606e-1138.18Glutathione S-transferase zeta class OS=Euphorbia ... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_6504 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE64D01 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK740010 ID=CK740010; Name=CK740010; organism=Citrus sinensis; type=EST; length=594bp
CTTGGTTGTCAATAAAATGATCTCTGTAAAGAGACCTTGGCAGAAGTTAT
AACTTATGGCTGAAGAAGAAGTGAAGCTCTATGGCACATGGGTAAGCCCT
TTTAGTCGCAGAATCGAGCTTGCACTGAAACTGAAAGGGGTTCCGTTTGA
GTACATAGAAGTAGATCTGTCCAACAAGAGTCCTGAACTTCTGAAATACA
ATCCAATTCACAAGAAAATCCCAGTGCTTGTACACAATGGCAAATCAATT
GTTGAATCTCTAATCATTCTCGAGTACATCGACGACAAATGGAAGAATAA
TCCCATTTTGCCTCGAGATCCTCATCAAAGAGCCGTGGCTCGCTTCTGGG
CTAAGTTCATCGACGAAAAGCTGTTGGCAACAGGAATGAAGGCCAGTTTA
GCTGAAGGGAAGGAGAAAGAGCTGCTGAATGAAGAAATACTTGAGCAGAT
GAAATTGCTGGAGAATGAACTCAATGGAAAAGACTTCTTTGGAGGTGAGG
CGATTGGGCTTGTTGACATTGTTGCAACTGTGGTCGCATTTTGGTTCCCA
ATAAGCCATGAAGTTCTTGGAGTAGAAGTAATCACTCAGGAAAA
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