CK740044
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK740044 vs. ExPASy Swiss-Prot
Match: SUCD_PSEAE (Succinyl-CoA ligase [ADP-forming] subunit alpha OS=Pseudomonas aeruginosa GN=sucD PE=3 SV=2) HSP 1 Score: 145.591 bits (366), Expect = 7.325e-35 Identity = 71/106 (66.98%), Postives = 78/106 (73.58%), Query Frame = 2 Query: 20 RLIGPNCPGIIKPGECKIGIMPGYIHKPGRVGIVSRSGTLTYEAVFQTTVVGLGQSTCVGIGGDPFNGTNFVDCLEKFLVDPQTXXXXXXXXXXXXXXXDAAALIK 337 RLIGPNCPG+I PGECKIGIMPG+IH PG+VGIVSRSGTLTYEAV QTT G GQSTCVGIGGDP G+NF+D L+ F DPQT +AAA IK Sbjct: 118 RLIGPNCPGVITPGECKIGIMPGHIHLPGKVGIVSRSGTLTYEAVKQTTDAGFGQSTCVGIGGDPIPGSNFIDILKLFQEDPQTEAIVMIGEIGGSAEEEAAAFIK 223
BLAST of CK740044 vs. ExPASy Swiss-Prot
Match: SUCA_SCHPO (Probable succinyl-CoA ligase [GDP-forming] subunit alpha, mitochondrial OS=Schizosaccharomyces pombe GN=SPAC16E8.17c PE=2 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 1.249e-34 Identity = 70/110 (63.64%), Postives = 80/110 (72.73%), Query Frame = 2 Query: 8 QSKTRLIGPNCPGIIKPGECKIGIMPGYIHKPGRVGIVSRSGTLTYEAVFQTTVVGLGQSTCVGIGGDPFNGTNFVDCLEKFLVDPQTXXXXXXXXXXXXXXXDAAALIK 337 QSK+RL+GPNCPGII+PG+CKIGIMP +IHKPG +GIVSRSGTLTYEAV QTT LGQS +GIGGDPF GTNF+D L+ FL DP T DAA I+ Sbjct: 147 QSKSRLVGPNCPGIIRPGQCKIGIMPSHIHKPGCIGIVSRSGTLTYEAVNQTTQTDLGQSLVIGIGGDPFPGTNFIDALKLFLDDPNTQGIILIGEIGGSAEEDAAEFIR 256
BLAST of CK740044 vs. ExPASy Swiss-Prot
Match: SUCD_BACSU (Succinyl-CoA ligase [ADP-forming] subunit alpha OS=Bacillus subtilis GN=sucD PE=1 SV=3) HSP 1 Score: 140.198 bits (352), Expect = 3.078e-33 Identity = 65/86 (75.58%), Postives = 71/86 (82.56%), Query Frame = 2 Query: 14 KTRLIGPNCPGIIKPGECKIGIMPGYIHKPGRVGIVSRSGTLTYEAVFQTTVVGLGQSTCVGIGGDPFNGTNFVDCLEKFLVDPQT 271 KTRLIGPNCPG+I P ECKIGIMPGYIHK G VG+VSRSGTLTYEAV Q + G+GQST VGIGGDP NGTNF+D L+ F DP T Sbjct: 116 KTRLIGPNCPGVITPEECKIGIMPGYIHKKGHVGVVSRSGTLTYEAVHQLSEAGVGQSTAVGIGGDPVNGTNFIDVLKAFNEDPDT 201
BLAST of CK740044 vs. ExPASy Swiss-Prot
Match: SUCD_COXBU (Succinyl-CoA ligase [ADP-forming] subunit alpha OS=Coxiella burnetii GN=sucD PE=3 SV=2) HSP 1 Score: 138.272 bits (347), Expect = 1.169e-32 Identity = 64/84 (76.19%), Postives = 72/84 (85.71%), Query Frame = 2 Query: 20 RLIGPNCPGIIKPGECKIGIMPGYIHKPGRVGIVSRSGTLTYEAVFQTTVVGLGQSTCVGIGGDPFNGTNFVDCLEKFLVDPQT 271 R+IGPNCPG+I PGECKIGIMPG+IH+ G+VGIVSRSGTLTYEAV QTT +G GQSTCVGIGGDP GT+F+D LE F D QT Sbjct: 119 RMIGPNCPGVITPGECKIGIMPGHIHQRGKVGIVSRSGTLTYEAVNQTTQMGFGQSTCVGIGGDPIPGTSFIDVLEMFEKDSQT 202
BLAST of CK740044 vs. ExPASy Swiss-Prot
Match: SUCD_STAES (Succinyl-CoA ligase [ADP-forming] subunit alpha OS=Staphylococcus epidermidis (strain ATCC 12228) GN=sucD PE=3 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 1.995e-32 Identity = 67/110 (60.91%), Postives = 77/110 (70.00%), Query Frame = 2 Query: 14 KTRLIGPNCPGIIKPGECKIGIMPGYIHKPGRVGIVSRSGTLTYEAVFQTTVVGLGQSTCVGIGGDPFNGTNFVDCLEKFLVDPQTXXXXXXXXXXXXXXXDAAALIKES 343 KTRL+GPNCPG+I ECKIGIMPGYIHK G VG+VSRSGTLTYEAV Q T G+GQ+T VGIGGDP NGTNF+D L+ F D +T +AA IKE+ Sbjct: 116 KTRLVGPNCPGVITADECKIGIMPGYIHKKGHVGVVSRSGTLTYEAVHQLTEEGIGQTTAVGIGGDPVNGTNFIDVLKAFNEDSETKAVVMIGEIGGTAEEEAAQWIKEN 225
BLAST of CK740044 vs. ExPASy Swiss-Prot
Match: SUCD_STAEQ (Succinyl-CoA ligase [ADP-forming] subunit alpha OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=sucD PE=3 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 1.995e-32 Identity = 67/110 (60.91%), Postives = 77/110 (70.00%), Query Frame = 2 Query: 14 KTRLIGPNCPGIIKPGECKIGIMPGYIHKPGRVGIVSRSGTLTYEAVFQTTVVGLGQSTCVGIGGDPFNGTNFVDCLEKFLVDPQTXXXXXXXXXXXXXXXDAAALIKES 343 KTRL+GPNCPG+I ECKIGIMPGYIHK G VG+VSRSGTLTYEAV Q T G+GQ+T VGIGGDP NGTNF+D L+ F D +T +AA IKE+ Sbjct: 116 KTRLVGPNCPGVITADECKIGIMPGYIHKKGHVGVVSRSGTLTYEAVHQLTEEGIGQTTAVGIGGDPVNGTNFIDVLKAFNEDSETKAVVMIGEIGGTAEEEAAQWIKEN 225
BLAST of CK740044 vs. ExPASy Swiss-Prot
Match: SUCD_HAEIN (Succinyl-CoA ligase [ADP-forming] subunit alpha OS=Haemophilus influenzae GN=sucD PE=3 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 5.804e-32 Identity = 65/107 (60.75%), Postives = 77/107 (71.96%), Query Frame = 2 Query: 23 LIGPNCPGIIKPGECKIGIMPGYIHKPGRVGIVSRSGTLTYEAVFQTTVVGLGQSTCVGIGGDPFNGTNFVDCLEKFLVDPQTXXXXXXXXXXXXXXXDAAALIKES 343 +IGPNCPG+I P ECKIGIMP +IHK G+VGIVSRSGTLTYEAV QTT G GQSTCVGIGGDP G++F+D LE+F DP+T +AA IK++ Sbjct: 119 MIGPNCPGVITPDECKIGIMPAHIHKKGKVGIVSRSGTLTYEAVKQTTDEGFGQSTCVGIGGDPIPGSSFIDILERFQQDPETEAIVMIGEIGGSAEEEAAIFIKDN 225
BLAST of CK740044 vs. ExPASy Swiss-Prot
Match: SUCD_STAAW (Succinyl-CoA ligase [ADP-forming] subunit alpha OS=Staphylococcus aureus (strain MW2) GN=sucD PE=3 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 9.900e-32 Identity = 66/108 (61.11%), Postives = 75/108 (69.44%), Query Frame = 2 Query: 14 KTRLIGPNCPGIIKPGECKIGIMPGYIHKPGRVGIVSRSGTLTYEAVFQTTVVGLGQSTCVGIGGDPFNGTNFVDCLEKFLVDPQTXXXXXXXXXXXXXXXDAAALIK 337 KTRL+GPNCPG+I ECKIGIMPGYIHK G VG+VSRSGTLTYEAV Q T G+GQ+T VGIGGDP NGTNF+D L+ F D +T +AA IK Sbjct: 116 KTRLVGPNCPGVITADECKIGIMPGYIHKKGHVGVVSRSGTLTYEAVHQLTEEGIGQTTAVGIGGDPVNGTNFIDVLKAFNEDDETKAVVMIGEIGGTAEEEAAEWIK 223
BLAST of CK740044 vs. ExPASy Swiss-Prot
Match: SUCD_STAAS (Succinyl-CoA ligase [ADP-forming] subunit alpha OS=Staphylococcus aureus (strain MSSA476) GN=sucD PE=3 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 9.900e-32 Identity = 66/108 (61.11%), Postives = 75/108 (69.44%), Query Frame = 2 Query: 14 KTRLIGPNCPGIIKPGECKIGIMPGYIHKPGRVGIVSRSGTLTYEAVFQTTVVGLGQSTCVGIGGDPFNGTNFVDCLEKFLVDPQTXXXXXXXXXXXXXXXDAAALIK 337 KTRL+GPNCPG+I ECKIGIMPGYIHK G VG+VSRSGTLTYEAV Q T G+GQ+T VGIGGDP NGTNF+D L+ F D +T +AA IK Sbjct: 116 KTRLVGPNCPGVITADECKIGIMPGYIHKKGHVGVVSRSGTLTYEAVHQLTEEGIGQTTAVGIGGDPVNGTNFIDVLKAFNEDDETKAVVMIGEIGGTAEEEAAEWIK 223
BLAST of CK740044 vs. ExPASy Swiss-Prot
Match: SUCD_STAAR (Succinyl-CoA ligase [ADP-forming] subunit alpha OS=Staphylococcus aureus (strain MRSA252) GN=sucD PE=3 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 9.900e-32 Identity = 66/108 (61.11%), Postives = 75/108 (69.44%), Query Frame = 2 Query: 14 KTRLIGPNCPGIIKPGECKIGIMPGYIHKPGRVGIVSRSGTLTYEAVFQTTVVGLGQSTCVGIGGDPFNGTNFVDCLEKFLVDPQTXXXXXXXXXXXXXXXDAAALIK 337 KTRL+GPNCPG+I ECKIGIMPGYIHK G VG+VSRSGTLTYEAV Q T G+GQ+T VGIGGDP NGTNF+D L+ F D +T +AA IK Sbjct: 116 KTRLVGPNCPGVITADECKIGIMPGYIHKKGHVGVVSRSGTLTYEAVHQLTEEGIGQTTAVGIGGDPVNGTNFIDVLKAFNEDDETKAVVMIGEIGGTAEEEAAEWIK 223 The following BLAST results are available for this feature:
BLAST of CK740044 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 46
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CK740044 ID=CK740044; Name=CK740044; organism=Citrus sinensis; type=EST; length=348bpback to top |