CK740044
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK740044 vs. ExPASy Swiss-Prot
Match: SUCD_METTH (Succinyl-CoA ligase [ADP-forming] subunit alpha OS=Methanobacterium thermoautotrophicum GN=sucD PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 3.411e-24 Identity = 57/90 (63.33%), Postives = 63/90 (70.00%), Query Frame = 2 Query: 2 NRQSKTRLIGPNCPGIIKPGECKIGIMPGYIHKPGRVGIVSRSGTLTYEAVFQTTVVGLGQSTCVGIGGDPFNGTNFVDCLEKFLVDPQT 271 +R KT +IGPN PGII PG K+GIMP +I G +GIVSRSGTLTYE Q T G GQSTCVGIGGDP G FVD LE+F DP T Sbjct: 116 SRMGKT-VIGPNTPGIITPGIGKLGIMPTHIFTEGTIGIVSRSGTLTYEFAAQLTEAGFGQSTCVGIGGDPVTGLGFVDVLERFEDDPGT 204
BLAST of CK740044 vs. ExPASy Swiss-Prot
Match: SUCD2_ARCFU (Succinyl-CoA ligase [ADP-forming] subunit alpha 2 OS=Archaeoglobus fulgidus GN=sucD2 PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 9.923e-24 Identity = 53/89 (59.55%), Postives = 64/89 (71.91%), Query Frame = 2 Query: 5 RQSKTRLIGPNCPGIIKPGECKIGIMPGYIHKPGRVGIVSRSGTLTYEAVFQTTVVGLGQSTCVGIGGDPFNGTNFVDCLEKFLVDPQT 271 +++ LIGPNCPGII PG+ +GIMP I KPG VGIVSRSGTLTY+ + T +GLGQST VGIGGD GT+FV+ L F D +T Sbjct: 113 KEAGATLIGPNCPGIISPGKTHLGIMPVQIFKPGNVGIVSRSGTLTYQIAYNLTKLGLGQSTVVGIGGDRIIGTDFVEVLRLFEDDKET 201
BLAST of CK740044 vs. ExPASy Swiss-Prot
Match: SUCD1_ARCFU (Succinyl-CoA ligase [ADP-forming] subunit alpha 1 OS=Archaeoglobus fulgidus GN=sucD1 PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 5.445e-22 Identity = 51/112 (45.54%), Postives = 65/112 (58.04%), Query Frame = 2 Query: 5 RQSKTRLIGPNCPGIIKPGECKIGIMPGYIHKPGRVGIVSRSGTLTYEAVFQTTVVGLGQSTCVGIGGDPFNGTNFVDCLEKFLVDPQTXXXXXXXXXXXXXXXDAAALIKE 340 R+ K+ L+GPNCPG+I PG K+G++P G +G+VSRSGTLTY+ T G+GQST VGIGGDP G FVD L+ F D +T AA IK+ Sbjct: 116 REVKSMLLGPNCPGVISPGRSKVGLLPDRSFTQGNLGVVSRSGTLTYQICENLTKAGIGQSTVVGIGGDPMPGLTFVDVLKMFEEDEETKAVLLVGEIGGTAEEKAAEFIKQ 227
BLAST of CK740044 vs. ExPASy Swiss-Prot
Match: SUCD_MYCBO (Succinyl-CoA ligase [ADP-forming] subunit alpha OS=Mycobacterium bovis GN=sucD PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 6.020e-21 Identity = 48/86 (55.81%), Postives = 60/86 (69.77%), Query Frame = 2 Query: 14 KTRLIGPNCPGIIKPGECKIGIMPGYIHKPGRVGIVSRSGTLTYEAVFQTTVVGLGQSTCVGIGGDPFNGTNFVDCLEKFLVDPQT 271 KTR+IGPNCPGII PG+ GI P I PG +G+VS+SGTLTY+ +F+ + LG ST +GIGGDP GT +D +E F DP T Sbjct: 130 KTRIIGPNCPGIISPGQSLAGITPANITGPGPIGLVSKSGTLTYQMMFE--LRDLGFSTAIGIGGDPVIGTTHIDAIEAFEKDPDT 213
BLAST of CK740044 vs. ExPASy Swiss-Prot
Match: SUCD_MYCTU (Succinyl-CoA ligase [ADP-forming] subunit alpha OS=Mycobacterium tuberculosis GN=sucD PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 7.863e-21 Identity = 48/86 (55.81%), Postives = 60/86 (69.77%), Query Frame = 2 Query: 14 KTRLIGPNCPGIIKPGECKIGIMPGYIHKPGRVGIVSRSGTLTYEAVFQTTVVGLGQSTCVGIGGDPFNGTNFVDCLEKFLVDPQT 271 KTR+IGPNCPGII PG+ GI P I PG +G+VS+SGTLTY+ +F+ + LG ST +GIGGDP GT +D +E F DP T Sbjct: 130 KTRIIGPNCPGIISPGQSLAGITPANITGPGPIGLVSKSGTLTYQMMFE--LRDLGFSTAIGIGGDPVIGTTHIDAIEAFERDPDT 213
BLAST of CK740044 vs. ExPASy Swiss-Prot
Match: SUCD_METJA (Succinyl-CoA ligase [ADP-forming] subunit alpha OS=Methanocaldococcus jannaschii GN=sucD PE=1 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 1.063e-17 Identity = 44/84 (52.38%), Postives = 54/84 (64.29%), Query Frame = 2 Query: 20 RLIGPNCPGIIKPGECKIGIMPGYIHKPGRVGIVSRSGTLTYEAVFQTTVVGLGQSTCVGIGGDPFNGTNFVDCLEKFLVDPQT 271 ++IGPN PGI P K+GI+P + K G VG+VSRSGTLTYE Q G G STCVGIGGDP G + + L+ F D +T Sbjct: 123 KIIGPNTPGIASPKVGKLGIIPMEVLKEGSVGMVSRSGTLTYEIAHQIKKAGFGVSTCVGIGGDPIVGLRYKEVLDLFEKDDET 206 The following BLAST results are available for this feature:
BLAST of CK740044 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 46
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Sequences
The
following sequences are available for this feature:
EST sequence >CK740044 ID=CK740044; Name=CK740044; organism=Citrus sinensis; type=EST; length=348bpback to top |