CK740046
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK740046 vs. ExPASy Swiss-Prot
Match: ADF1_MAIZE (Actin-depolymerizing factor 1 OS=Zea mays GN=ADF1 PE=2 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 3.296e-35 Identity = 68/122 (55.74%), Postives = 87/122 (71.31%), Query Frame = 1 Query: 64 KMHSRNCKGRRFTRYVIFKIDXXXXXXXXXXTGGPAESYEDFAAALPENDCRYAVYDFDYVTSENCQKSKIFFIAWSPSTSRIRAKMLYATSKDRFRRELDGIHYEIQATDPTEMDLEELKT 429 K+ R K RR R+++F+ID G P + Y DF +LP N+CRYA+YD D+ T ENCQKSKIFF +WSP T+R R+KMLYA+SKDRFRRELDGI EIQATDP+EM L+ +++ Sbjct: 15 KVKFRELKSRRTFRFIVFRIDDTDMEIKVDRLGEPNQGYGDFTDSLPANECRYAIYDLDFTTIENCQKSKIFFFSWSPDTARTRSKMLYASSKDRFRRELDGIQCEIQATDPSEMSLDIVRS 136
BLAST of CK740046 vs. ExPASy Swiss-Prot
Match: ADF2_MAIZE (Actin-depolymerizing factor 2 OS=Zea mays GN=ADF2 PE=2 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 4.305e-35 Identity = 68/122 (55.74%), Postives = 88/122 (72.13%), Query Frame = 1 Query: 64 KMHSRNCKGRRFTRYVIFKIDXXXXXXXXXXTGGPAESYEDFAAALPENDCRYAVYDFDYVTSENCQKSKIFFIAWSPSTSRIRAKMLYATSKDRFRRELDGIHYEIQATDPTEMDLEELKT 429 K+ R+ K RR R+++F+ID G P + Y DF +LP ++CRYA+YD D+ T ENCQKSKIFF +WSP T+R R+KMLYA+SKDRFRRELDGI EIQATDP+EM L+ +K+ Sbjct: 15 KVKFRDLKARRSFRFIVFRIDDKDMEIKVDRLGEPNQGYGDFTDSLPADECRYAIYDLDFTTVENCQKSKIFFFSWSPDTARTRSKMLYASSKDRFRRELDGIQCEIQATDPSEMSLDIVKS 136
BLAST of CK740046 vs. ExPASy Swiss-Prot
Match: ADF_BRANA (Actin-depolymerizing factor (Fragment) OS=Brassica napus PE=2 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 7.343e-35 Identity = 69/123 (56.10%), Postives = 91/123 (73.98%), Query Frame = 1 Query: 79 NCK------GRRFTRYVIFKIDXXXXXXXXXXTGGPAESYEDFAAALPENDCRYAVYDFDYVTSENCQKSKIFFIAWSPSTSRIRAKMLYATSKDRFRRELDGIHYEIQATDPTEMDLEELKT 429 NCK +R R++IF+ID G P E+Y+DF A+LP ++CRYAV+DFD+ T+ENCQKSKIFFIAWSP +SR+R KM+YA+SKDRF+RELDGI E+QATDP+EM + +K+ Sbjct: 3 NCKLKFLELKKRIFRFIIFRIDGQQVVVEKL--GNPQETYDDFTASLPADECRYAVFDFDFTTNENCQKSKIFFIAWSPDSSRVRMKMVYASSKDRFKRELDGIQVELQATDPSEMSFDIIKS 123
BLAST of CK740046 vs. ExPASy Swiss-Prot
Match: ADF9_ARATH (Actin-depolymerizing factor 9 OS=Arabidopsis thaliana GN=ADF9 PE=2 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 9.590e-35 Identity = 65/114 (57.02%), Postives = 84/114 (73.68%), Query Frame = 1 Query: 85 KGRRFTRYVIFKIDXXXXXXXXXXTGGPAESYEDFAAALPENDCRYAVYDFDYVTSENCQKSKIFFIAWSPSTSRIRAKMLYATSKDRFRRELDGIHYEIQATDPTEMDLEELK 426 K ++ RYV++K++ G ESY+D AA+LPE+DCRYAV+DFDYVT +NC+ SKIFFI WSP SRIR KM+YATSK RR LDG+HYE+QATDPTEM ++++ Sbjct: 13 KWKKVHRYVVYKLEEKSRKVTVDKVGAAGESYDDLAASLPEDDCRYAVFDFDYVTVDNCRMSKIFFITWSPEASRIREKMMYATSKSGLRRVLDGVHYELQATDPTEMGFDKIQ 126
BLAST of CK740046 vs. ExPASy Swiss-Prot
Match: ADF12_ARATH (Actin-depolymerizing factor 12 OS=Arabidopsis thaliana GN=ADF12 PE=2 SV=2) HSP 1 Score: 144.436 bits (363), Expect = 2.136e-34 Identity = 69/122 (56.56%), Postives = 89/122 (72.95%), Query Frame = 1 Query: 64 KMHSRNCKGRRFTRYVIFKIDXXXXXXXXXXTGGPAESYEDFAAALPENDCRYAVYDFDYVTSENCQKSKIFFIAWSPSTSRIRAKMLYATSKDRFRRELDGIHYEIQATDPTEMDLEELKT 429 K+ K +R R++IF+ID G P E+Y+DF LP N+CRYAVYDFD+ T+EN QKSKIFFIAWSP +SR+R KM+YA+SKDRF+RELDGI E+QATDP+EM L+ +K+ Sbjct: 15 KLKFLELKAKRNYRFIIFRIDGQQVVVEKL--GSPQENYDDFTNYLPPNECRYAVYDFDFTTAENIQKSKIFFIAWSPDSSRVRMKMVYASSKDRFKRELDGIQVELQATDPSEMSLDIIKS 134
BLAST of CK740046 vs. ExPASy Swiss-Prot
Match: ADF3_ARATH (Actin-depolymerizing factor 3 OS=Arabidopsis thaliana GN=ADF3 PE=1 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 8.119e-34 Identity = 63/122 (51.64%), Postives = 91/122 (74.59%), Query Frame = 1 Query: 64 KMHSRNCKGRRFTRYVIFKIDXXXXXXXXXXTGGPAESYEDFAAALPENDCRYAVYDFDYVTSENCQKSKIFFIAWSPSTSRIRAKMLYATSKDRFRRELDGIHYEIQATDPTEMDLEELKT 429 K+ K +R R++I+KI+ G P +++ED AA+LP ++CRYA++DFD+V+SE +S+IFF+AWSP T+R+R+KM+YA+SKDRF+RELDGI E+QATDPTEMDL+ K+ Sbjct: 15 KLKFMELKTKRTHRFIIYKIEELQKQVIVEKIGEPGQTHEDLAASLPADECRYAIFDFDFVSSEGVPRSRIFFVAWSPDTARVRSKMIYASSKDRFKRELDGIQVELQATDPTEMDLDVFKS 136
BLAST of CK740046 vs. ExPASy Swiss-Prot
Match: ADF8_ORYSJ (Putative actin-depolymerizing factor 8 OS=Oryza sativa subsp. japonica GN=ADF8 PE=3 SV=2) HSP 1 Score: 132.88 bits (333), Expect = 6.433e-31 Identity = 65/112 (58.04%), Postives = 82/112 (73.21%), Query Frame = 1 Query: 91 RRFTRYVIFKIDXXXXXXXXXXTGGPAESYEDFAAALPENDCRYAVYDFDYVTSENCQKSKIFFIAWSPSTSRIRAKMLYATSKDRFRRELDGIHYEIQATDPTEMDLEELK 426 R+ RYVIFKID TG P ESY+DF A+LP + AVYD D+V+ +NC+KSKIFFI+WSPS S IRAK +YA +++FR ELDG+H+EIQATDP +MDLE L+ Sbjct: 33 RKVHRYVIFKIDDRREEIVVEKTGAPWESYDDFTASLPAD----AVYDLDFVSDDNCRKSKIFFISWSPSLSCIRAKTIYAVWRNQFRHELDGVHFEIQATDPDDMDLEVLR 140
BLAST of CK740046 vs. ExPASy Swiss-Prot
Match: ADF3_MAIZE (Actin-depolymerizing factor 3 OS=Zea mays GN=ADF3 PE=1 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 9.289e-30 Identity = 56/114 (49.12%), Postives = 84/114 (73.68%), Query Frame = 1 Query: 85 KGRRFTRYVIFKIDXXXXXXXXXXTGGPAESYEDFAAALPENDCRYAVYDFDYVTSENCQKSKIFFIAWSPSTSRIRAKMLYATSKDRFRRELDGIHYEIQATDPTEMDLEELK 426 + +R R++ FK+D G A SY+DF +LPENDCRYA+YDFD+VT+E+ QKS+IF+I WSPS++++++KMLYA+S +F+ L+GI E+QATD +E+ L+E+K Sbjct: 22 QSKRLHRFITFKMDDKFKEIVVDQVGDRATSYDDFTNSLPENDCRYAIYDFDFVTAEDVQKSRIFYILWSPSSAKVKSKMLYASSNQKFKSGLNGIQVELQATDASEISLDEIK 135
BLAST of CK740046 vs. ExPASy Swiss-Prot
Match: ADF4_ORYSJ (Actin-depolymerizing factor 4 OS=Oryza sativa subsp. japonica GN=ADF4 PE=2 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 3.903e-28 Identity = 54/121 (44.63%), Postives = 82/121 (67.77%), Query Frame = 1 Query: 64 KMHSRNCKGRRFTRYVIFKIDXXXXXXXXXXTGGPAESYEDFAAALPENDCRYAVYDFDYVTSENCQKSKIFFIAWSPSTSRIRAKMLYATSKDRFRRELDGIHYEIQATDPTEMDLEELK 426 K+ + +R R++ F +D G SYEDF ++LPE DCR+A+YDFD++T+E+ KS+IF+I WSP +++R+KMLYA+S +RF++EL+GI E+QATD E+ L+ LK Sbjct: 15 KLKFNELQSKRMHRFITFMMDNKGKEIIVDKIGDRTTSYEDFTSSLPEGDCRFAIYDFDFLTAEDVPKSRIFYILWSPDNAKVRSKMLYASSNERFKKELNGIQLEVQATDAGEISLDALK 135
BLAST of CK740046 vs. ExPASy Swiss-Prot
Match: ADF3_ORYSJ (Actin-depolymerizing factor 3 OS=Oryza sativa subsp. japonica GN=ADF3 PE=1 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 2.450e-22 Identity = 52/136 (38.24%), Postives = 79/136 (58.09%), Query Frame = 1 Query: 73 SRNCKGR-------RFTRYVIFKIDXXXXXXXXXXTGGPAESYEDFAAALPENDCRYAVYDFDYVTSE-----------NCQKSKIFFIAWSPSTSRIRAKMLYATSKDRFRRELDGIHYEIQATDPTEMDLEELK 426 S CK R R R+V+FKID G +++ A+LP + CRYAVYD D+ S+ +SKIFF++WSP+ + +R+KM+YA+S + F++ELDG+ ++QATDP+E+ L+ LK Sbjct: 11 SEECKARFQELRAGRAHRFVVFKIDDAMRQVVVDRVGPRDAGFDELTASLPADGCRYAVYDHDFTVSDATATAAAGEGGEAPRSKIFFVSWSPAAADVRSKMVYASSNEGFKKELDGVQIDLQATDPSELTLDVLK 146 The following BLAST results are available for this feature:
BLAST of CK740046 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 68
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CK740046 ID=CK740046; Name=CK740046; organism=Citrus sinensis; type=EST; length=460bpback to top |