CK740048

Overview
NameCK740048
Unique NameCK740048
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length418
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CK740048 vs. ExPASy Swiss-Prot
Match: METK2_SUASA (S-adenosylmethionine synthetase 2 OS=Suaeda salsa GN=METK2 PE=2 SV=1)

HSP 1 Score: 245.358 bits (625), Expect = 6.849e-65
Identity = 119/139 (85.61%), Postives = 124/139 (89.21%), Query Frame = 1 
Query:    1 HVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDR 417
            HVLATKLGARLTEVRKN TC+WLRPDGKTQVTVEY NDNGAMVP+RVHTVLISTQHDETVTN++IAADLKEHVIKPVIPEKYLD+KTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY             KDPTKVDR
Sbjct:  142 HVLATKLGARLTEVRKNGTCAWLRPDGKTQVTVEYNNDNGAMVPIRVHTVLISTQHDETVTNEQIAADLKEHVIKPVIPEKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDR 280
[Close]
BLAST of CK740048 vs. ExPASy Swiss-Prot
Match: METK1_SOLLC (S-adenosylmethionine synthetase 1 OS=Solanum lycopersicum GN=SAM1 PE=2 SV=1)

HSP 1 Score: 245.358 bits (625), Expect = 6.849e-65
Identity = 120/139 (86.33%), Postives = 122/139 (87.77%), Query Frame = 1 
Query:    1 HVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDR 417
            HVLATKLGARLTEVRKN TC+WLRPDGKTQVTVEY NDNGAMVP+RVHTVLISTQHDETVTNDEIA DLKEHVIKPVIPEKYLDE TIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY             KDPTKVDR
Sbjct:  142 HVLATKLGARLTEVRKNGTCAWLRPDGKTQVTVEYSNDNGAMVPIRVHTVLISTQHDETVTNDEIARDLKEHVIKPVIPEKYLDENTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDR 280
[Close]
BLAST of CK740048 vs. ExPASy Swiss-Prot
Match: METK_MUSAC (S-adenosylmethionine synthetase OS=Musa acuminata GN=METK PE=2 SV=1)

HSP 1 Score: 244.973 bits (624), Expect = 8.946e-65
Identity = 120/139 (86.33%), Postives = 123/139 (88.49%), Query Frame = 1 
Query:    1 HVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDR 417
            HVLATKLGARLTEVRKN TC WLRPDGKTQVTVEY ND+GAM+PVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPE+YLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY             KDPTKVDR
Sbjct:  143 HVLATKLGARLTEVRKNGTCPWLRPDGKTQVTVEYRNDHGAMIPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEQYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDR 281
[Close]
BLAST of CK740048 vs. ExPASy Swiss-Prot
Match: METK1_SOLTU (S-adenosylmethionine synthetase 1 OS=Solanum tuberosum GN=METK1 PE=2 SV=1)

HSP 1 Score: 244.973 bits (624), Expect = 8.946e-65
Identity = 119/139 (85.61%), Postives = 122/139 (87.77%), Query Frame = 1 
Query:    1 HVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDR 417
            HVLATKLGARLTEVRKN TC WLRPDGKTQVTVEY NDNGAM+P++VHTVLISTQHDETVTNDEIA DLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY             KDPTKVDR
Sbjct:  142 HVLATKLGARLTEVRKNGTCPWLRPDGKTQVTVEYCNDNGAMIPIKVHTVLISTQHDETVTNDEIARDLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDR 280
[Close]
BLAST of CK740048 vs. ExPASy Swiss-Prot
Match: METK_DENCR (S-adenosylmethionine synthetase OS=Dendrobium crumenatum GN=SAMS PE=2 SV=1)

HSP 1 Score: 244.202 bits (622), Expect = 1.526e-64
Identity = 119/139 (85.61%), Postives = 122/139 (87.77%), Query Frame = 1 
Query:    1 HVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDR 417
            HVLATKLGARLTEVRKN TC WLRPDGKTQVTVEY ND GAMVP+RVHTVLISTQHDETVTNDEIAADLKEHVIKPV+PE+YLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY             KDPTKVDR
Sbjct:  145 HVLATKLGARLTEVRKNGTCPWLRPDGKTQVTVEYRNDGGAMVPIRVHTVLISTQHDETVTNDEIAADLKEHVIKPVVPEQYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDR 283
[Close]
BLAST of CK740048 vs. ExPASy Swiss-Prot
Match: METK4_ARATH (S-adenosylmethionine synthetase 4 OS=Arabidopsis thaliana GN=METK4 PE=1 SV=1)

HSP 1 Score: 244.202 bits (622), Expect = 1.526e-64
Identity = 119/139 (85.61%), Postives = 123/139 (88.49%), Query Frame = 1 
Query:    1 HVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDR 417
            HVLATKLGA+LTEVRKN TC WLRPDGKTQVT+EY N++GAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY             KDPTKVDR
Sbjct:  142 HVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTIEYINESGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDR 280
[Close]
BLAST of CK740048 vs. ExPASy Swiss-Prot
Match: METK_SOLBR (S-adenosylmethionine synthetase OS=Solanum brevidens GN=SAMS PE=2 SV=1)

HSP 1 Score: 243.432 bits (620), Expect = 2.603e-64
Identity = 118/139 (84.89%), Postives = 121/139 (87.05%), Query Frame = 1 
Query:    1 HVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDR 417
            HVLATKLGARLTEVRKN TC WL+PDGKTQVTVEY NDNGAM+P+RVHTVLISTQHDETVTNDEIA DLKEH IKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY             KDPTKVDR
Sbjct:  142 HVLATKLGARLTEVRKNGTCRWLKPDGKTQVTVEYCNDNGAMIPIRVHTVLISTQHDETVTNDEIARDLKEHAIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDR 280
[Close]
BLAST of CK740048 vs. ExPASy Swiss-Prot
Match: METK_CAMSI (S-adenosylmethionine synthetase OS=Camellia sinensis GN=SAM PE=2 SV=1)

HSP 1 Score: 243.432 bits (620), Expect = 2.603e-64
Identity = 118/139 (84.89%), Postives = 122/139 (87.77%), Query Frame = 1 
Query:    1 HVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDR 417
            HVLATKLGARLTEVRKN TC WLRPDGKTQVTVEYYN+ GA VP+RVHT+LISTQHDETVTNDEIAADLKEHVIKPVIP+KYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY             KDPTKVDR
Sbjct:  142 HVLATKLGARLTEVRKNGTCPWLRPDGKTQVTVEYYNEKGATVPIRVHTLLISTQHDETVTNDEIAADLKEHVIKPVIPDKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDR 280
[Close]
BLAST of CK740048 vs. ExPASy Swiss-Prot
Match: METK2_DAUCA (S-adenosylmethionine synthetase 2 OS=Daucus carota GN=SAMS2 PE=2 SV=1)

HSP 1 Score: 243.432 bits (620), Expect = 2.603e-64
Identity = 118/139 (84.89%), Postives = 121/139 (87.05%), Query Frame = 1 
Query:    1 HVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDR 417
            HVLATKLGA+LTEVRKN TC WLRPDGKTQVTVEYYND GAMVP+RVHTVLISTQHDETVTNDEIAADLKEHVIKP+IP KYLDEKTIFHLNPSGRFVIGGPHGDAGLTGR IIIDTY             KDPTKVDR
Sbjct:  142 HVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNDKGAMVPIRVHTVLISTQHDETVTNDEIAADLKEHVIKPIIPAKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRMIIIDTYGGWGAHGGGAFSGKDPTKVDR 280
[Close]
BLAST of CK740048 vs. ExPASy Swiss-Prot
Match: METK1_PEA (S-adenosylmethionine synthetase 1 (Fragment) OS=Pisum sativum GN=SAMS1 PE=2 SV=2)

HSP 1 Score: 243.432 bits (620), Expect = 2.603e-64
Identity = 119/139 (85.61%), Postives = 121/139 (87.05%), Query Frame = 1 
Query:    1 HVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDR 417
            HVLATKLGARLTEVRKN TC+WLRPDG TQVTVEYYND GAMVP+RVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLD KTI HLNPSGRFVIGGPHGDAGLTGRKIIIDTY             KDPTKVDR
Sbjct:  117 HVLATKLGARLTEVRKNGTCAWLRPDGNTQVTVEYYNDKGAMVPIRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDSKTICHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDR 255
The following BLAST results are available for this feature:
BLAST of CK740048 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK2_SUASA6.849e-6585.61S-adenosylmethionine synthetase 2 OS=Suaeda salsa ... [more]
METK1_SOLLC6.849e-6586.33S-adenosylmethionine synthetase 1 OS=Solanum lycop... [more]
METK_MUSAC8.946e-6586.33S-adenosylmethionine synthetase OS=Musa acuminata ... [more]
METK1_SOLTU8.946e-6585.61S-adenosylmethionine synthetase 1 OS=Solanum tuber... [more]
METK_DENCR1.526e-6485.61S-adenosylmethionine synthetase OS=Dendrobium crum... [more]
METK4_ARATH1.526e-6485.61S-adenosylmethionine synthetase 4 OS=Arabidopsis t... [more]
METK_SOLBR2.603e-6484.89S-adenosylmethionine synthetase OS=Solanum brevide... [more]
METK_CAMSI2.603e-6484.89S-adenosylmethionine synthetase OS=Camellia sinens... [more]
METK2_DAUCA2.603e-6484.89S-adenosylmethionine synthetase 2 OS=Daucus carota... [more]
METK1_PEA2.603e-6485.61S-adenosylmethionine synthetase 1 (Fragment) OS=Pi... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUSDA-FP_6542 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE64G12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK740048 ID=CK740048; Name=CK740048; organism=Citrus sinensis; type=EST; length=418bp
CATGTCCTTGCCACCAAACTTGGTGCTCGTCTCACGGAGGTTAGGAAGAA
TAGTACCTGCTCTTGGCTAAGGCCCGATGGGAAGACCCAGGTCACTGTTG
AGTACTACAATGACAATGGTGCCATGGTCCCAGTCCGTGTCCACACGGTC
CTCATTTCAACCCAGCATGATGAGACTGTCACAAATGATGAAATTGCTGC
TGACCTTAAGGAGCACGTCATTAAGCCTGTCATCCCCGAGAAGTACCTTG
ATGAGAAGACCATCTTCCACCTTAATCCATCAGGTCGTTTTGTCATTGGT
GGGCCTCATGGTGATGCTGGTCTCACTGGACGTAAGATCATCATCGACAC
TTATGGTGGCTGGGGAGCCCATGGTGGCGGTGCTTTCTCTGGAAAAGACC
CTACTAAGGTGGATAGGA
back to top