CK740048

Overview
NameCK740048
Unique NameCK740048
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length418
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CK740048 vs. ExPASy Swiss-Prot
Match: METK3_ARATH (S-adenosylmethionine synthetase 3 OS=Arabidopsis thaliana GN=METK3 PE=1 SV=1)

HSP 1 Score: 239.195 bits (609), Expect = 4.909e-63
Identity = 116/139 (83.45%), Postives = 120/139 (86.33%), Query Frame = 1 
Query:    1 HVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDR 417
            HVLATKLGA+LTEVRKN TC WLRPDGKTQVTVEY ND GAM+P+RVHTVLISTQHDETVTNDEIAADLKEHVIKPVIP KYLD+ TIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY             KDPTKVDR
Sbjct:  142 HVLATKLGAKLTEVRKNKTCPWLRPDGKTQVTVEYKNDGGAMIPIRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPAKYLDDNTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDR 280
[Close]
BLAST of CK740048 vs. ExPASy Swiss-Prot
Match: METK2_PINCO (S-adenosylmethionine synthetase 2 OS=Pinus contorta GN=SAMS2 PE=2 SV=1)

HSP 1 Score: 238.039 bits (606), Expect = 1.094e-62
Identity = 116/139 (83.45%), Postives = 120/139 (86.33%), Query Frame = 1 
Query:    1 HVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDR 417
            HVLATKLGA+LTEVRKN TC WLRPDGKTQVT+EY N+ GAMVP RVHTVLISTQHDETVTND+IAADLKEHVIKPVIPEKYLDE TIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY             KDPTKVDR
Sbjct:  142 HVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTIEYRNEGGAMVPERVHTVLISTQHDETVTNDQIAADLKEHVIKPVIPEKYLDENTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDR 280
[Close]
BLAST of CK740048 vs. ExPASy Swiss-Prot
Match: METK2_PICSI (S-adenosylmethionine synthetase 2 OS=Picea sitchensis GN=METK2 PE=2 SV=1)

HSP 1 Score: 238.039 bits (606), Expect = 1.094e-62
Identity = 116/139 (83.45%), Postives = 120/139 (86.33%), Query Frame = 1 
Query:    1 HVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDR 417
            HVLATKLGA+LTEVRKN TC WLRPDGKTQVT+EY N+ GAMVP RVHTVLISTQHDETVTND+IAADLKEHVIKPVIPEKYLDE TIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY             KDPTKVDR
Sbjct:  142 HVLATKLGAKLTEVRKNGTCPWLRPDGKTQVTIEYRNEGGAMVPERVHTVLISTQHDETVTNDQIAADLKEHVIKPVIPEKYLDENTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDR 280
[Close]
BLAST of CK740048 vs. ExPASy Swiss-Prot
Match: METK1_HORVU (S-adenosylmethionine synthetase 1 OS=Hordeum vulgare GN=SAM1 PE=2 SV=1)

HSP 1 Score: 237.654 bits (605), Expect = 1.428e-62
Identity = 116/139 (83.45%), Postives = 120/139 (86.33%), Query Frame = 1 
Query:    1 HVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDR 417
            H+LATKLGARLTEVRKN TC+WLRPDGKTQVT+EY N+ GAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIP KYLDE TIFHLNPSGRFVIGGPHGDAGLT RKIIIDTY             KDPTKVDR
Sbjct:  144 HMLATKLGARLTEVRKNGTCAWLRPDGKTQVTIEYLNEGGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPGKYLDENTIFHLNPSGRFVIGGPHGDAGLTARKIIIDTYGGWGAHGGGAFSGKDPTKVDR 282
[Close]
BLAST of CK740048 vs. ExPASy Swiss-Prot
Match: METK4_BRAJU (S-adenosylmethionine synthetase 4 OS=Brassica juncea GN=MSAMS4 PE=2 SV=1)

HSP 1 Score: 237.269 bits (604), Expect = 1.865e-62
Identity = 115/139 (82.73%), Postives = 119/139 (85.61%), Query Frame = 1 
Query:    1 HVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDR 417
            HVLATKLGA+LTEVRKN TC WLRPDGKTQVTVEY N+ GAM+P+RVHTVLISTQHDETVTNDEIA DLKEHVIKPVIP KYLDE TIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY             KDPTKVDR
Sbjct:  142 HVLATKLGAKLTEVRKNKTCPWLRPDGKTQVTVEYKNEGGAMIPIRVHTVLISTQHDETVTNDEIAVDLKEHVIKPVIPAKYLDENTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDR 280
[Close]
BLAST of CK740048 vs. ExPASy Swiss-Prot
Match: METK_PINBN (S-adenosylmethionine synthetase OS=Pinus banksiana GN=METK PE=2 SV=1)

HSP 1 Score: 236.498 bits (602), Expect = 3.182e-62
Identity = 117/139 (84.17%), Postives = 118/139 (84.89%), Query Frame = 1 
Query:    1 HVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDR 417
            HVLATKLGA+LTEVRKN TC WLRP GKTQVTVEY NDNGAMVP RVHTVLISTQHDETV NDEIA DLKEHVIKPVIPEKYLDE TIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY             KDPTKVDR
Sbjct:  142 HVLATKLGAKLTEVRKNGTCPWLRPHGKTQVTVEYRNDNGAMVPERVHTVLISTQHDETVPNDEIAPDLKEHVIKPVIPEKYLDENTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDR 280
[Close]
BLAST of CK740048 vs. ExPASy Swiss-Prot
Match: METK2_PETHY (S-adenosylmethionine synthetase 2 OS=Petunia hybrida GN=SAM2 PE=2 SV=1)

HSP 1 Score: 236.498 bits (602), Expect = 3.182e-62
Identity = 113/139 (81.29%), Postives = 120/139 (86.33%), Query Frame = 1 
Query:    1 HVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDR 417
            HVLATKLGA+LTEVRKN TC WLRPDGKTQVTVEY NDNGAM+P+RVHT+LISTQHDETVTND+IA DLKEHVIKPV+P +YLDE TIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY             KDPTKVDR
Sbjct:  142 HVLATKLGAKLTEVRKNKTCPWLRPDGKTQVTVEYRNDNGAMIPLRVHTILISTQHDETVTNDQIAQDLKEHVIKPVVPAEYLDENTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDR 280
[Close]
BLAST of CK740048 vs. ExPASy Swiss-Prot
Match: METK1_TOBAC (S-adenosylmethionine synthetase 1 OS=Nicotiana tabacum GN=SAMS1 PE=2 SV=1)

HSP 1 Score: 236.498 bits (602), Expect = 3.182e-62
Identity = 115/139 (82.73%), Postives = 119/139 (85.61%), Query Frame = 1 
Query:    1 HVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDR 417
            HV ATKLGA+LTEVRKN TC WLRPDGKTQVTVEY NDNGAMVP+RVHTVLISTQHDETVTND+IA DLKEHVIKPVIP +YLDE TIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY             KDPTKVDR
Sbjct:  142 HVWATKLGAKLTEVRKNKTCPWLRPDGKTQVTVEYKNDNGAMVPIRVHTVLISTQHDETVTNDQIAQDLKEHVIKPVIPSQYLDENTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDR 280
[Close]
BLAST of CK740048 vs. ExPASy Swiss-Prot
Match: METK1_PICSI (S-adenosylmethionine synthetase 1 OS=Picea sitchensis GN=METK1 PE=2 SV=1)

HSP 1 Score: 236.113 bits (601), Expect = 4.155e-62
Identity = 115/139 (82.73%), Postives = 120/139 (86.33%), Query Frame = 1 
Query:    1 HVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDR 417
            HVLATKLGARLTEVRK+ TC WLRPDGKTQVTVEY N+ GAMVP+RVHTVLISTQHDETVTNDEIAADLKEHVIKPV+P +YLDE TIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY             KDPTKVDR
Sbjct:  142 HVLATKLGARLTEVRKDGTCPWLRPDGKTQVTVEYKNEGGAMVPLRVHTVLISTQHDETVTNDEIAADLKEHVIKPVVPSQYLDENTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDR 280
[Close]
BLAST of CK740048 vs. ExPASy Swiss-Prot
Match: METK2_TOBAC (S-adenosylmethionine synthetase 2 OS=Nicotiana tabacum GN=SAMS2 PE=2 SV=1)

HSP 1 Score: 234.187 bits (596), Expect = 1.579e-61
Identity = 114/139 (82.01%), Postives = 119/139 (85.61%), Query Frame = 1 
Query:    1 HVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDR 417
            HVLAT+LGA+LTEVRKN TC WLRPDGKTQVTVEY NDNGAMVP+RVHTVLISTQHDE VTN++IA DLKEHVIKPVIP KYLDE TIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY             KDPTKVDR
Sbjct:  142 HVLATQLGAKLTEVRKNKTCPWLRPDGKTQVTVEYKNDNGAMVPIRVHTVLISTQHDEGVTNEQIAQDLKEHVIKPVIPAKYLDENTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGEGAFSGKDPTKVDR 280
The following BLAST results are available for this feature:
BLAST of CK740048 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK3_ARATH4.909e-6383.45S-adenosylmethionine synthetase 3 OS=Arabidopsis t... [more]
METK2_PINCO1.094e-6283.45S-adenosylmethionine synthetase 2 OS=Pinus contort... [more]
METK2_PICSI1.094e-6283.45S-adenosylmethionine synthetase 2 OS=Picea sitchen... [more]
METK1_HORVU1.428e-6283.45S-adenosylmethionine synthetase 1 OS=Hordeum vulga... [more]
METK4_BRAJU1.865e-6282.73S-adenosylmethionine synthetase 4 OS=Brassica junc... [more]
METK_PINBN3.182e-6284.17S-adenosylmethionine synthetase OS=Pinus banksiana... [more]
METK2_PETHY3.182e-6281.29S-adenosylmethionine synthetase 2 OS=Petunia hybri... [more]
METK1_TOBAC3.182e-6282.73S-adenosylmethionine synthetase 1 OS=Nicotiana tab... [more]
METK1_PICSI4.155e-6282.73S-adenosylmethionine synthetase 1 OS=Picea sitchen... [more]
METK2_TOBAC1.579e-6182.01S-adenosylmethionine synthetase 2 OS=Nicotiana tab... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_6542 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE64G12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK740048 ID=CK740048; Name=CK740048; organism=Citrus sinensis; type=EST; length=418bp
CATGTCCTTGCCACCAAACTTGGTGCTCGTCTCACGGAGGTTAGGAAGAA
TAGTACCTGCTCTTGGCTAAGGCCCGATGGGAAGACCCAGGTCACTGTTG
AGTACTACAATGACAATGGTGCCATGGTCCCAGTCCGTGTCCACACGGTC
CTCATTTCAACCCAGCATGATGAGACTGTCACAAATGATGAAATTGCTGC
TGACCTTAAGGAGCACGTCATTAAGCCTGTCATCCCCGAGAAGTACCTTG
ATGAGAAGACCATCTTCCACCTTAATCCATCAGGTCGTTTTGTCATTGGT
GGGCCTCATGGTGATGCTGGTCTCACTGGACGTAAGATCATCATCGACAC
TTATGGTGGCTGGGGAGCCCATGGTGGCGGTGCTTTCTCTGGAAAAGACC
CTACTAAGGTGGATAGGA
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