CK740048

Overview
NameCK740048
Unique NameCK740048
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length418
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK740048 vs. ExPASy Swiss-Prot
Match: METK1_MOUSE (S-adenosylmethionine synthetase isoform type-1 OS=Mus musculus GN=Mat1a PE=2 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 2.144e-42
Identity = 80/138 (57.97%), Postives = 100/138 (72.46%), Query Frame = 1
Query:    4 VLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDR 417
            VLA KL  R+ ++R++    WLRPD KTQVTV+Y  DNGA++PVR+HT++IS QH+E +T + +   LKE VIK V+P KYLDE T++HL PSGRFVIGGP GDAG+TGRKII+DTY             KD TKVDR
Sbjct:  156 VLAHKLNTRIADLRRSGVLPWLRPDSKTQVTVQYMQDNGAVIPVRIHTIVISVQHNEDITLEAMQEALKEQVIKAVVPAKYLDEDTVYHLQPSGRFVIGGPQGDAGVTGRKIIVDTYGGWGAHGGGAFSGKDYTKVDR 293          
BLAST of CK740048 vs. ExPASy Swiss-Prot
Match: METK1_BOVIN (S-adenosylmethionine synthetase isoform type-1 OS=Bos taurus GN=MAT1A PE=2 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 1.815e-41
Identity = 79/138 (57.25%), Postives = 102/138 (73.91%), Query Frame = 1
Query:    4 VLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDR 417
            +LA +L AR+ E+R++    WL+PD KTQVTV+Y  DNGA++P+RVHTV+IS QH+E +T +++   LKE VI+ V+P +YLDE TI+HL PSGRFVIGGP GDAG+TGRKII+DTY             KD TKVDR
Sbjct:  156 MLAHRLNARMAELRRSGQLPWLQPDSKTQVTVQYTQDNGAVIPMRVHTVVISVQHNEDITLEDMRRALKEQVIRAVVPARYLDEDTIYHLQPSGRFVIGGPQGDAGVTGRKIIVDTYGGWGAHGGGAFSGKDYTKVDR 293          
BLAST of CK740048 vs. ExPASy Swiss-Prot
Match: METK_CLOPS (S-adenosylmethionine synthetase OS=Clostridium perfringens (strain SM101 / Type A) GN=metK PE=3 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 2.621e-40
Identity = 83/137 (60.58%), Postives = 98/137 (71.53%), Query Frame = 1
Query:    7 LATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDR 417
            +A +L  RLTEVRKN T  +LRPDGKTQVTVEY ND     PVR+  ++ISTQH   V+ ++I ADL EHVIK VIP + LDE T +++NP+GRFVIGGP GDAGLTGRKII+DTY             KDPTKVDR
Sbjct:  149 MAHRLSRRLTEVRKNGTLPYLRPDGKTQVTVEYENDK----PVRIDAIVISTQHGPEVSQEQIQADLMEHVIKAVIPAELLDENTKYYINPTGRFVIGGPQGDAGLTGRKIIVDTYGGYGRHGGGAFSGKDPTKVDR 281          
BLAST of CK740048 vs. ExPASy Swiss-Prot
Match: METK_CLOP1 (S-adenosylmethionine synthetase OS=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) GN=metK PE=3 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 2.621e-40
Identity = 83/137 (60.58%), Postives = 98/137 (71.53%), Query Frame = 1
Query:    7 LATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDR 417
            +A +L  RLTEVRKN T  +LRPDGKTQVTVEY ND     PVR+  ++ISTQH   V+ ++I ADL EHVIK VIP + LDE T +++NP+GRFVIGGP GDAGLTGRKII+DTY             KDPTKVDR
Sbjct:  149 MAHRLSRRLTEVRKNGTLPYLRPDGKTQVTVEYENDK----PVRIDAIVISTQHGPEVSQEQIQADLMEHVIKAVIPAELLDENTKYYINPTGRFVIGGPQGDAGLTGRKIIVDTYGGYGRHGGGAFSGKDPTKVDR 281          
BLAST of CK740048 vs. ExPASy Swiss-Prot
Match: METK_CLONN (S-adenosylmethionine synthetase OS=Clostridium novyi (strain NT) GN=metK PE=3 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 7.626e-40
Identity = 78/137 (56.93%), Postives = 100/137 (72.99%), Query Frame = 1
Query:    7 LATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDR 417
            +A KL  +L EVRKN T ++LRPDGKTQVTVEY ++     PVR+  V++STQHD  VT ++I  D+ EHVIK V+P ++LD++T +++NP+GRFVIGGPHGD GLTGRKII+DTY             KDPTKVDR
Sbjct:  149 MAHKLSRKLAEVRKNGTLAYLRPDGKTQVTVEYEDNK----PVRIDAVVVSTQHDPEVTQEQIQKDIMEHVIKTVVPNEWLDDETKYYINPTGRFVIGGPHGDTGLTGRKIIVDTYGGSGRHGGGAFSGKDPTKVDR 281          
BLAST of CK740048 vs. ExPASy Swiss-Prot
Match: METK_BACHK (S-adenosylmethionine synthetase OS=Bacillus thuringiensis subsp. konkukian GN=metK PE=3 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 7.626e-40
Identity = 87/137 (63.50%), Postives = 100/137 (72.99%), Query Frame = 1
Query:    7 LATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDR 417
            LA KL  RLTEVRKN T S+LRPDGKTQVTVEY ++NG   PVRV T++ISTQH   VT +EI  DLKEHVIK V+P + +D +T F +NP+GRFVIGGP GDAGLTGRKII+DTY             KD TKVDR
Sbjct:  154 LAHKLARRLTEVRKNDTLSYLRPDGKTQVTVEY-DENGK--PVRVDTIVISTQHHPDVTWEEIDRDLKEHVIKAVVPAELIDGETKFFINPTGRFVIGGPQGDAGLTGRKIIVDTYGGYARHGGGAFSGKDATKVDR 287          
BLAST of CK740048 vs. ExPASy Swiss-Prot
Match: METK_BACCZ (S-adenosylmethionine synthetase OS=Bacillus cereus (strain ZK / E33L) GN=metK PE=3 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 7.626e-40
Identity = 87/137 (63.50%), Postives = 100/137 (72.99%), Query Frame = 1
Query:    7 LATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDR 417
            LA KL  RLTEVRKN T S+LRPDGKTQVTVEY ++NG   PVRV T++ISTQH   VT +EI  DLKEHVIK V+P + +D +T F +NP+GRFVIGGP GDAGLTGRKII+DTY             KD TKVDR
Sbjct:  154 LAHKLARRLTEVRKNDTLSYLRPDGKTQVTVEY-DENGK--PVRVDTIVISTQHHPDVTWEEIDRDLKEHVIKAVVPAELIDGETKFFINPTGRFVIGGPQGDAGLTGRKIIVDTYGGYARHGGGAFSGKDATKVDR 287          
BLAST of CK740048 vs. ExPASy Swiss-Prot
Match: METK_BACCQ (S-adenosylmethionine synthetase OS=Bacillus cereus (strain Q1) GN=metK PE=3 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 7.626e-40
Identity = 87/137 (63.50%), Postives = 100/137 (72.99%), Query Frame = 1
Query:    7 LATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDR 417
            LA KL  RLTEVRKN T S+LRPDGKTQVTVEY ++NG   PVRV T++ISTQH   VT +EI  DLKEHVIK V+P + +D +T F +NP+GRFVIGGP GDAGLTGRKII+DTY             KD TKVDR
Sbjct:  154 LAHKLARRLTEVRKNDTLSYLRPDGKTQVTVEY-DENGK--PVRVDTIVISTQHHPDVTWEEIDRDLKEHVIKAVVPAELIDGETKFFINPTGRFVIGGPQGDAGLTGRKIIVDTYGGYARHGGGAFSGKDATKVDR 287          
BLAST of CK740048 vs. ExPASy Swiss-Prot
Match: METK_BACC7 (S-adenosylmethionine synthetase OS=Bacillus cereus (strain AH187) GN=metK PE=3 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 7.626e-40
Identity = 87/137 (63.50%), Postives = 100/137 (72.99%), Query Frame = 1
Query:    7 LATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDR 417
            LA KL  RLTEVRKN T S+LRPDGKTQVTVEY ++NG   PVRV T++ISTQH   VT +EI  DLKEHVIK V+P + +D +T F +NP+GRFVIGGP GDAGLTGRKII+DTY             KD TKVDR
Sbjct:  154 LAHKLARRLTEVRKNDTLSYLRPDGKTQVTVEY-DENGK--PVRVDTIVISTQHHPDVTWEEIDRDLKEHVIKAVVPAELIDGETKFFINPTGRFVIGGPQGDAGLTGRKIIVDTYGGYARHGGGAFSGKDATKVDR 287          
BLAST of CK740048 vs. ExPASy Swiss-Prot
Match: METK_BACC3 (S-adenosylmethionine synthetase OS=Bacillus cereus (strain 03BB102) GN=metK PE=3 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 7.626e-40
Identity = 87/137 (63.50%), Postives = 100/137 (72.99%), Query Frame = 1
Query:    7 LATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDR 417
            LA KL  RLTEVRKN T S+LRPDGKTQVTVEY ++NG   PVRV T++ISTQH   VT +EI  DLKEHVIK V+P + +D +T F +NP+GRFVIGGP GDAGLTGRKII+DTY             KD TKVDR
Sbjct:  154 LAHKLARRLTEVRKNDTLSYLRPDGKTQVTVEY-DENGK--PVRVDTIVISTQHHPDVTWEEIDRDLKEHVIKAVVPAELIDGETKFFINPTGRFVIGGPQGDAGLTGRKIIVDTYGGYARHGGGAFSGKDATKVDR 287          
The following BLAST results are available for this feature:
BLAST of CK740048 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK1_MOUSE2.144e-4257.97S-adenosylmethionine synthetase isoform type-1 OS=... [more]
METK1_BOVIN1.815e-4157.25S-adenosylmethionine synthetase isoform type-1 OS=... [more]
METK_CLOPS2.621e-4060.58S-adenosylmethionine synthetase OS=Clostridium per... [more]
METK_CLOP12.621e-4060.58S-adenosylmethionine synthetase OS=Clostridium per... [more]
METK_CLONN7.626e-4056.93S-adenosylmethionine synthetase OS=Clostridium nov... [more]
METK_BACHK7.626e-4063.50S-adenosylmethionine synthetase OS=Bacillus thurin... [more]
METK_BACCZ7.626e-4063.50S-adenosylmethionine synthetase OS=Bacillus cereus... [more]
METK_BACCQ7.626e-4063.50S-adenosylmethionine synthetase OS=Bacillus cereus... [more]
METK_BACC77.626e-4063.50S-adenosylmethionine synthetase OS=Bacillus cereus... [more]
METK_BACC37.626e-4063.50S-adenosylmethionine synthetase OS=Bacillus cereus... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_6542 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE64G12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK740048 ID=CK740048; Name=CK740048; organism=Citrus sinensis; type=EST; length=418bp
CATGTCCTTGCCACCAAACTTGGTGCTCGTCTCACGGAGGTTAGGAAGAA
TAGTACCTGCTCTTGGCTAAGGCCCGATGGGAAGACCCAGGTCACTGTTG
AGTACTACAATGACAATGGTGCCATGGTCCCAGTCCGTGTCCACACGGTC
CTCATTTCAACCCAGCATGATGAGACTGTCACAAATGATGAAATTGCTGC
TGACCTTAAGGAGCACGTCATTAAGCCTGTCATCCCCGAGAAGTACCTTG
ATGAGAAGACCATCTTCCACCTTAATCCATCAGGTCGTTTTGTCATTGGT
GGGCCTCATGGTGATGCTGGTCTCACTGGACGTAAGATCATCATCGACAC
TTATGGTGGCTGGGGAGCCCATGGTGGCGGTGCTTTCTCTGGAAAAGACC
CTACTAAGGTGGATAGGA
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