CK740058

Overview
NameCK740058
Unique NameCK740058
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length513
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK740058 vs. ExPASy Swiss-Prot
Match: PME23_ARATH (Probable pectinesterase/pectinesterase inhibitor 23 OS=Arabidopsis thaliana GN=PME23 PE=2 SV=3)

HSP 1 Score: 109.768 bits (273), Expect = 7.670e-24
Identity = 48/103 (46.60%), Postives = 68/103 (66.02%), Query Frame = 2
Query:   14 PVQGSFPTYLGRPWKEYSRTVIMQSSITDVIHPAGWHEWDGNFALNTLFYGEHQNAGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFS 322
            P++     YLGRPWKE+SRT+IM+++I DVI PAGW  W G+FAL TL+Y EH N G G+  + RVKW G + +T   +A  +T   F+ G +W+  T  P++
Sbjct:  464 PMKSVNKAYLGRPWKEFSRTIIMKTTIDDVIDPAGWLPWSGDFALKTLYYAEHMNTGPGSNQAQRVKWPGIKKLT-PQDALLYTGDRFLRGDTWIPQTQVPYT 565          
BLAST of CK740058 vs. ExPASy Swiss-Prot
Match: PME12_ARATH (Probable pectinesterase/pectinesterase inhibitor 12 OS=Arabidopsis thaliana GN=PME12 PE=2 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 1.002e-23
Identity = 51/109 (46.79%), Postives = 69/109 (63.30%), Query Frame = 2
Query:    5 DLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDVIHPAGWHEWDGNFALNTLFYGEHQNAGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL 331
            DL        +YLGRPW+E+SRTV+M+S I + I  +GW +W+G  AL+TL+YGE+ N G G+ T  RV W GF ++    +A  FT   FI G  WLGST FP+  G+
Sbjct:  440 DLFNSSNKVKSYLGRPWREFSRTVVMESYIDEFIDGSGWSKWNGGEALDTLYYGEYNNNGPGSETVKRVNWPGFHIM-GYEDAFNFTATEFITGDGWLGSTSFPYDNGI 547          
BLAST of CK740058 vs. ExPASy Swiss-Prot
Match: PME47_ARATH (Probable pectinesterase/pectinesterase inhibitor 47 OS=Arabidopsis thaliana GN=PME47 PE=2 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 1.709e-23
Identity = 53/109 (48.62%), Postives = 69/109 (63.30%), Query Frame = 2
Query:    5 DLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDVIHPAGWHEWDGNFALNTLFYGEHQNAGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL 331
            DL     S  T+LGRPWK YSRTV +QS I+DV+ P GW EW+G   L+T+ YGE+ N G GA TS RV+W G+ ++ +  +A  FT  +F  G +WL  T  PF  GL
Sbjct:  513 DLAADPKSTMTFLGRPWKPYSRTVYIQSYISDVVQPVGWLEWNGTTGLDTISYGEYDNFGPGADTSKRVQWSGYSLL-NLVQAMNFTVYNFTLGDTWLPQTDIPFYGGL 620          
BLAST of CK740058 vs. ExPASy Swiss-Prot
Match: PME21_ARATH (Probable pectinesterase/pectinesterase inhibitor 21 OS=Arabidopsis thaliana GN=PME21 PE=2 SV=2)

HSP 1 Score: 108.612 bits (270), Expect = 1.709e-23
Identity = 49/109 (44.95%), Postives = 64/109 (58.72%), Query Frame = 2
Query:    5 DLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDVIHPAGWHEWDGNFALNTLFYGEHQNAGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL 331
            D   V+ +   YLGRPWKEYSRT+IM + I D + P GW  W G+F L TLFY E QN G G+  + RV W G + + S  +   FTP  +I G  W+   G P++ GL
Sbjct:  458 DYLAVKETSKAYLGRPWKEYSRTIIMNTFIPDFVQPQGWQPWLGDFGLKTLFYSEVQNTGPGSALANRVTWAGIKTL-SEEDILKFTPAQYIQGDDWIPGKGVPYTTGL 565          
BLAST of CK740058 vs. ExPASy Swiss-Prot
Match: PME19_ARATH (Probable pectinesterase/pectinesterase inhibitor 19 OS=Arabidopsis thaliana GN=PME19 PE=2 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 3.807e-23
Identity = 48/99 (48.48%), Postives = 62/99 (62.63%), Query Frame = 2
Query:   35 TYLGRPWKEYSRTVIMQSSITDVIHPAGWHEWDGNFALNTLFYGEHQNAGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL 331
            TYLGRPW+ +S   +MQS I D++ PAGW  W+G   L+TL Y E+QN G GA TS RVKW GF+V+    +A  FT    + G +WL  T  P+  GL
Sbjct:  426 TYLGRPWRIFSTVAVMQSFIGDLVDPAGWTPWEGETGLSTLHYREYQNRGPGAVTSRRVKWSGFKVMKDPKQATEFTVAKLLDGETWLKETRIPYESGL 524          
BLAST of CK740058 vs. ExPASy Swiss-Prot
Match: PME42_ARATH (Probable pectinesterase/pectinesterase inhibitor 42 OS=Arabidopsis thaliana GN=PME42 PE=2 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 2.467e-22
Identity = 46/99 (46.46%), Postives = 62/99 (62.63%), Query Frame = 2
Query:   35 TYLGRPWKEYSRTVIMQSSITDVIHPAGWHEWDGNFALNTLFYGEHQNAGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL 331
            TYLGRPW+ +S   ++QS I D++ PAGW  W+G   L+TL Y E+QN G GA TS RVKW GF+V+    +A  FT    + G +WL  +  P+  GL
Sbjct:  426 TYLGRPWRIFSTVAVLQSFIGDLVDPAGWTPWEGETGLSTLHYREYQNRGPGAVTSRRVKWSGFKVMKDPKQATEFTVAKLLDGETWLKESRIPYKSGL 524          
BLAST of CK740058 vs. ExPASy Swiss-Prot
Match: PME30_ARATH (Probable pectinesterase 30 OS=Arabidopsis thaliana GN=PME30 PE=2 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 3.223e-22
Identity = 46/99 (46.46%), Postives = 61/99 (61.62%), Query Frame = 2
Query:   35 TYLGRPWKEYSRTVIMQSSITDVIHPAGWHEWDGNFALNTLFYGEHQNAGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL 331
            TYLGRPW+ +S   ++QS I D++ PAGW  W G   L+TL Y E+QN G GA TS RVKW GF+V+    +A  FT    + G +WL  +  P+  GL
Sbjct:  399 TYLGRPWRRFSTVAVLQSFIGDLVDPAGWTPWKGETGLSTLHYREYQNRGPGAVTSRRVKWSGFKVMKDPKKATEFTVAKLLDGETWLKESRIPYESGL 497          
BLAST of CK740058 vs. ExPASy Swiss-Prot
Match: PME46_ARATH (Probable pectinesterase/pectinesterase inhibitor 46 OS=Arabidopsis thaliana GN=PME46 PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 5.497e-22
Identity = 48/107 (44.86%), Postives = 68/107 (63.55%), Query Frame = 2
Query:    8 LKPVQG--SFPTYLGRPWKEYSRTVIMQSSITDVIHPAGWHEWDGNFALNTLFYGEHQNAGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFS 322
            +KP+       T+LGRPWK++S TVIM+S +   I+P GW  W G+ A +T+FY E+ N+G GA T  RVKW+G +   +  EA  FT   FI G++WL +T  PF+
Sbjct:  455 IKPLDNLTDIQTFLGRPWKDFSTTVIMKSFMDKFINPKGWLPWTGDTAPDTIFYAEYLNSGPGASTKNRVKWQGLKTSLTKKEANKFTVKPFIDGNNWLPATKVPFN 561          
BLAST of CK740058 vs. ExPASy Swiss-Prot
Match: PME24_ARATH (Putative pectinesterase/pectinesterase inhibitor 24 OS=Arabidopsis thaliana GN=PME24 PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 7.179e-22
Identity = 51/99 (51.52%), Postives = 61/99 (61.62%), Query Frame = 2
Query:   35 TYLGRPWKEYSRTVIMQSSITDVIHPAGWHEWDGNFALNTLFYGEHQNAGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL 331
            T+LGRPWK +S TVIM S +   I   GW  W G+ A +T+FYGE++N G GA T  RVKWKG R + S  EA  FT   FI G  WL +T  PF  GL
Sbjct:  464 TFLGRPWKNFSTTVIMDSYLHGFIDRKGWLPWTGDSAPDTIFYGEYKNTGPGASTKNRVKWKGLRFL-STKEANRFTVKPFIDGGRWLPATKVPFRSGL 561          
BLAST of CK740058 vs. ExPASy Swiss-Prot
Match: PME3_PHAVU (Pectinesterase 3 OS=Phaseolus vulgaris GN=MPE3 PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 1.354e-20
Identity = 47/97 (48.45%), Postives = 60/97 (61.86%), Query Frame = 2
Query:   32 PTYLGRPWKEYSRTVIMQSSITDVIHPAGWHEWDGNFAL-NTLFYGEHQNAGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPF 319
            PTYLGRPWK++S TVIMQS I  +++P GW  W  N     T+FY E+QN+G GA  S RVKW G++   +   A+ FT  SFI G  WL +    F
Sbjct:  481 PTYLGRPWKDFSTTVIMQSDIGALLNPVGWMSWVPNVEPPTTIFYAEYQNSGPGADVSQRVKWAGYKPTITDRNAEEFTVQSFIQGPEWLPNAAVQF 577          
The following BLAST results are available for this feature:
BLAST of CK740058 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 66
Match NameE-valueIdentityDescription
PME23_ARATH7.670e-2446.60Probable pectinesterase/pectinesterase inhibitor 2... [more]
PME12_ARATH1.002e-2346.79Probable pectinesterase/pectinesterase inhibitor 1... [more]
PME47_ARATH1.709e-2348.62Probable pectinesterase/pectinesterase inhibitor 4... [more]
PME21_ARATH1.709e-2344.95Probable pectinesterase/pectinesterase inhibitor 2... [more]
PME19_ARATH3.807e-2348.48Probable pectinesterase/pectinesterase inhibitor 1... [more]
PME42_ARATH2.467e-2246.46Probable pectinesterase/pectinesterase inhibitor 4... [more]
PME30_ARATH3.223e-2246.46Probable pectinesterase 30 OS=Arabidopsis thaliana... [more]
PME46_ARATH5.497e-2244.86Probable pectinesterase/pectinesterase inhibitor 4... [more]
PME24_ARATH7.179e-2251.52Putative pectinesterase/pectinesterase inhibitor 2... [more]
PME3_PHAVU1.354e-2048.45Pectinesterase 3 OS=Phaseolus vulgaris GN=MPE3 PE=... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_6552 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE64H10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK740058 ID=CK740058; Name=CK740058; organism=Citrus sinensis; type=EST; length=513bp
CTCCGATTTAAAACCGGTTCAGGGTAGTTTCCCGACGTACCTCGGCAGGC
CCTGGAAGGAGTACTCGAGGACGGTGATCATGCAGTCATCGATTACTGAC
GTGATCCACCCTGCCGGGTGGCACGAGTGGGATGGTAACTTCGCGTTGAA
CACATTGTTTTACGGAGAGCATCAGAACGCCGGAGCCGGTGCCGGAACTT
CAGGGAGAGTGAAATGGAAGGGATTTAGGGTTATTACAAGTGCTACCGAG
GCTCAAGCTTTTACTCCTGGAAGCTTCATTGCTGGTAGTAGCTGGCTGGG
CTCCACTGGTTTCCCATTCTCCCTTGGTTTGTAATATTCACTAGGAGTTT
TAATTAATATGTTTTGTATTAGTGGATCCATAGGTCTCTGGTCTTTCAAT
TTGTAATATTTGATTGAGCGTGTCTTATTCGTGGCTTCGATTTCACAAAT
ACTATTGTGTGATTAACAAGAAATAAAATAGCATGGGAAGAATAAAAAAA
AAAAAAAAAAAAA
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