CK740059

Overview
NameCK740059
Unique NameCK740059
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length556
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK740059 vs. ExPASy Swiss-Prot
Match: ARL4D_BOVIN (ADP-ribosylation factor-like protein 4D OS=Bos taurus GN=ARL4D PE=2 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 1.446e-32
Identity = 70/156 (44.87%), Postives = 102/156 (65.38%), Query Frame = 1
Query:    4 ILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEY-----KNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRH-WYIQSTCATSGEGLYEG 453
            ++++GLD+AGKT++LY+LK  E V +IPT GFN E +       + I+F VWDVGGQ+K+RPLWR Y + T GL+FVVD+ + +R+ EA+ ELHR+    + +   +LV ANKQD P A++AAE+  +L +  L      ++Q   A  G GL  G
Sbjct:   23 VVVIGLDSAGKTSLLYRLKFKEFVQSIPTKGFNTEKIRVPLGGSRGITFQVWDVGGQEKLRPLWRSYTRRTDGLVFVVDAAEAERLEEAKVELHRISRASDNQGVPVLVLANKQDQPGALSAAEVEKRLAVRELATATLTHVQGCSAVDGLGLQPG 178          
BLAST of CK740059 vs. ExPASy Swiss-Prot
Match: ARL11_BOVIN (ADP-ribosylation factor-like protein 11 OS=Bos taurus GN=ARL11 PE=2 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 1.446e-32
Identity = 67/151 (44.37%), Postives = 104/151 (68.87%), Query Frame = 1
Query:    1 RILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYK-NISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYE 450
            +++M+GLD+AGKTT+LY+LK  ++V T+PT+GFNVE +E   ++S T+WDVGGQ ++R  W+ + + T  L++V+DS D  R+ EA  EL  +L++  +    LLV ANKQ++P A++  EI D+LGL     R W +++  A +G GL E
Sbjct:   14 QVVMMGLDSAGKTTLLYRLKGYQLVETLPTVGFNVEPLEEPGHVSLTLWDVGGQSQLRASWKDHLEGTDILVYVLDSTDEARLPEAVAELREVLDDPSVASVPLLVLANKQEVPQALSLPEIRDRLGLQGFLGRSWDLRACSALTGAGLPE 164          
BLAST of CK740059 vs. ExPASy Swiss-Prot
Match: ARL11_MOUSE (ADP-ribosylation factor-like protein 11 OS=Mus musculus GN=Arl11 PE=2 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 5.493e-32
Identity = 65/151 (43.05%), Postives = 101/151 (66.89%), Query Frame = 1
Query:    1 RILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYK-NISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYE 450
            +++M+GLD+AGKTTILYKLK  ++V T+PT+GFNVE +E   ++S T+WD+GGQ ++R  W+ Y +    L++V+DS D  R+ EA  EL  +L +  +     LV ANKQ+ P A+   EI ++LGL   ++  W +++  A +G+GL E
Sbjct:   14 QVVMMGLDSAGKTTILYKLKGNQLVDTLPTVGFNVEPLEAPGHVSLTLWDIGGQTQLRATWKDYLEGIDLLVYVLDSTDEARLPEAVAELKEVLEDPNMAGVPFLVLANKQEAPGALPLLEIRNRLGLEGFQKHCWELRACSALTGQGLQE 164          
BLAST of CK740059 vs. ExPASy Swiss-Prot
Match: ARL5C_HUMAN (Putative ADP-ribosylation factor-like protein 5C OS=Homo sapiens GN=ARL5C PE=2 SV=4)

HSP 1 Score: 135.191 bits (339), Expect = 2.087e-31
Identity = 63/147 (42.86%), Postives = 96/147 (65.31%), Query Frame = 1
Query:    4 ILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGL 444
            +++VGLD  GKTTILY+    E+V   PTIG NVE +      F +WD+   + +  +W  Y+ NT+ +I V+DS DRDR++  R+EL++ML  + L+DA +L+FANKQD+ ++M   EI+  L L +++   W+IQ  CA + EGL
Sbjct:   19 VIIVGLDNEGKTTILYRFLTNEVVHMCPTIGSNVEEIILPKTHFFMWDIVRPEALSFIWNTYYSNTEFIILVIDSTDRDRLLTTREELYKMLAHEALQDASVLIFANKQDVKDSMRMVEISHFLTLSTIKDHSWHIQGCCALTREGL 165          
BLAST of CK740059 vs. ExPASy Swiss-Prot
Match: ARL11_RAT (ADP-ribosylation factor-like protein 11 OS=Rattus norvegicus GN=Arl11 PE=2 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 7.932e-31
Identity = 64/151 (42.38%), Postives = 98/151 (64.90%), Query Frame = 1
Query:    1 RILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYK-NISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYE 450
            +++M+GLD AGKTTILYKLK   +V T+PT+GFNVE +E   ++S T+WD+GGQ ++R  W+ Y +    L++V+DS D  R+ EA  EL  +L +  +     LV ANKQ+ P+A+   EI ++L L   +   W +++  A +G+GL E
Sbjct:   12 QVVMLGLDCAGKTTILYKLKGNRLVDTLPTVGFNVEPLEAPGHVSLTLWDIGGQTQLRATWKDYLEGIDLLVYVLDSTDEARLPEAVAELEEVLEDPNMAGVPFLVLANKQEAPDALPLLEIRNRLDLERFQDHCWELRACSALTGQGLQE 162          
BLAST of CK740059 vs. ExPASy Swiss-Prot
Match: ARL11_HUMAN (ADP-ribosylation factor-like protein 11 OS=Homo sapiens GN=ARL11 PE=1 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 1.353e-30
Identity = 64/151 (42.38%), Postives = 100/151 (66.23%), Query Frame = 1
Query:    1 RILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYK-NISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYE 450
            +++M+GLD+AGKTT+LYKLK  ++V T+PT+GFNVE ++   ++S T+WDVGGQ  +R  W+ Y + T  L++V+DS D  R+ E+  EL  +LN+  +     LV ANKQ+ P+A+   +I ++L L   +   W ++   A +GEGL E
Sbjct:   14 QVVMMGLDSAGKTTLLYKLKGHQLVETLPTVGFNVEPLKAPGHVSLTLWDVGGQAPLRASWKDYLEGTDILVYVLDSTDEARLPESAAELTEVLNDPNMAGVPFLVLANKQEAPDALPLLKIRNRLSLERFQDHCWELRGCSALTGEGLPE 164          
BLAST of CK740059 vs. ExPASy Swiss-Prot
Match: ARL6_PONAB (ADP-ribosylation factor-like protein 6 OS=Pongo abelii GN=ARL6 PE=2 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 1.954e-29
Identity = 65/154 (42.21%), Postives = 104/154 (67.53%), Query Frame = 1
Query:    4 ILMVGLDAAGKTTILYKLKLGEIVTT--IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDEL--RDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEG 453
            +L +GLD +GKTTI+ KLK     +   +PTIGF++E  +  ++SFTV+D+ GQ + R LW HY++  Q +IFV+DS+DR R+V A++EL  +LN  ++  R   +L FANK DL +A+ + +++  L L +++ + W+I ++ A  GEGL EG
Sbjct:   20 VLCLGLDNSGKTTIINKLKPSNAQSQNILPTIGFSIEKFKSSSLSFTVFDMSGQGRYRNLWEHYYKEGQAIIFVIDSSDRLRMVVAKEELDTLLNHPDIKHRRIPILFFANKMDLRDAVTSVKVSQLLCLENIKDKPWHICASDAIKGEGLQEG 173          
BLAST of CK740059 vs. ExPASy Swiss-Prot
Match: ARL6_HUMAN (ADP-ribosylation factor-like protein 6 OS=Homo sapiens GN=ARL6 PE=1 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 1.954e-29
Identity = 65/154 (42.21%), Postives = 104/154 (67.53%), Query Frame = 1
Query:    4 ILMVGLDAAGKTTILYKLKLGEIVTT--IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDEL--RDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEG 453
            +L +GLD +GKTTI+ KLK     +   +PTIGF++E  +  ++SFTV+D+ GQ + R LW HY++  Q +IFV+DS+DR R+V A++EL  +LN  ++  R   +L FANK DL +A+ + +++  L L +++ + W+I ++ A  GEGL EG
Sbjct:   20 VLCLGLDNSGKTTIINKLKPSNAQSQNILPTIGFSIEKFKSSSLSFTVFDMSGQGRYRNLWEHYYKEGQAIIFVIDSSDRLRMVVAKEELDTLLNHPDIKHRRIPILFFANKMDLRDAVTSVKVSQLLCLENIKDKPWHICASDAIKGEGLQEG 173          
BLAST of CK740059 vs. ExPASy Swiss-Prot
Match: ARL6_MOUSE (ADP-ribosylation factor-like protein 6 OS=Mus musculus GN=Arl6 PE=2 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 2.552e-29
Identity = 64/154 (41.56%), Postives = 105/154 (68.18%), Query Frame = 1
Query:    4 ILMVGLDAAGKTTILYKLKLGEIVTT--IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDEL--RDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEG 453
            +L +GLD +GKTTI+ KLK     +   +PTIGF++E  +  ++SFTV+D+ GQ + R LW HY+++ Q +IFV+DS+D+ R+V A++EL  +LN  ++  R   +L FANK DL +++ + +++  L L S++ + W+I ++ A  GEGL EG
Sbjct:   20 VLCLGLDNSGKTTIINKLKPSNAQSQDIVPTIGFSIEKFKSSSLSFTVFDMSGQGRYRNLWEHYYKDGQAIIFVIDSSDKLRMVVAKEELDTLLNHPDIKHRRIPILFFANKMDLRDSVTSVKVSQLLCLESIKDKPWHICASDAIKGEGLQEG 173          
BLAST of CK740059 vs. ExPASy Swiss-Prot
Match: ARL6_BOVIN (ADP-ribosylation factor-like protein 6 OS=Bos taurus GN=ARL6 PE=2 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 5.685e-29
Identity = 63/154 (40.91%), Postives = 103/154 (66.88%), Query Frame = 1
Query:    4 ILMVGLDAAGKTTILYKLKLGEIVTT--IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDEL--RDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEG 453
            +L +GLD +GKTTI+ KLK     +   +PTIGF+++  +  ++SFTV+D+ GQ + R LW HY++  Q +IFV+DS+D+ R+V A++EL  +LN  ++  R   +L FANK DL +A+ + +++  L L  ++ + W+I ++ A  GEGL EG
Sbjct:   20 VLCLGLDNSGKTTIINKLKPSNAQSQDIVPTIGFSIQKFKSSSLSFTVFDMSGQGRYRNLWEHYYKEGQAIIFVIDSSDKLRMVVAKEELRTLLNHPDIKHRRIPILFFANKMDLRDALTSVKVSQLLCLEDIKDKPWHICASDAIKGEGLQEG 173          
The following BLAST results are available for this feature:
BLAST of CK740059 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 217
Match NameE-valueIdentityDescription
ARL4D_BOVIN1.446e-3244.87ADP-ribosylation factor-like protein 4D OS=Bos tau... [more]
ARL11_BOVIN1.446e-3244.37ADP-ribosylation factor-like protein 11 OS=Bos tau... [more]
ARL11_MOUSE5.493e-3243.05ADP-ribosylation factor-like protein 11 OS=Mus mus... [more]
ARL5C_HUMAN2.087e-3142.86Putative ADP-ribosylation factor-like protein 5C O... [more]
ARL11_RAT7.932e-3142.38ADP-ribosylation factor-like protein 11 OS=Rattus ... [more]
ARL11_HUMAN1.353e-3042.38ADP-ribosylation factor-like protein 11 OS=Homo sa... [more]
ARL6_PONAB1.954e-2942.21ADP-ribosylation factor-like protein 6 OS=Pongo ab... [more]
ARL6_HUMAN1.954e-2942.21ADP-ribosylation factor-like protein 6 OS=Homo sap... [more]
ARL6_MOUSE2.552e-2941.56ADP-ribosylation factor-like protein 6 OS=Mus musc... [more]
ARL6_BOVIN5.685e-2940.91ADP-ribosylation factor-like protein 6 OS=Bos taur... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_6553 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE64H12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK740059 ID=CK740059; Name=CK740059; organism=Citrus sinensis; type=EST; length=556bp
AGAATTCTCATGGTAGGTCTCGATGCAGCTGGTAAGACTACTATCCTGTA
CAAGCTTAAGCTCGGAGAGATCGTCACCACCATTCCTACCATTGGATTTA
ATGTAGAGACCGTTGAGTATAAGAACATCAGCTTTACTGTCTGGGATGTC
GGGGGTCAAGACAAGATCCGACCTTTGTGGAGACATTATTTCCAAAACAC
CCAAGGACTCATCTTTGTGGTTGACAGTAATGATCGCGACCGTGTGGTAG
AAGCTAGGGATGAGTTGCACAGAATGTTGAATGAGGATGAATTGAGAGAT
GCTGTGCTGCTTGTATTTGCTAACAAGCAAGATCTTCCAAACGCAATGAA
TGCTGCTGAGATAACTGACAAGCTTGGCCTTCACTCTCTTCGCCAGCGCC
ACTGGTATATCCAGAGCACATGTGCCACTTCTGGTGAAGGGCTGTATGAG
GGACCTTGACTGGCTCTTAAACAACATTGCAAACAAGGCATAGACAACTA
AATTTTGAGTTTTGGGTTGCCCGCAACCTGCTGAAATACAGAGTTTAACA
ACACCA
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