CK740064

Overview
NameCK740064
Unique NameCK740064
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length702
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CK740064 vs. ExPASy Swiss-Prot
Match: H2AZ_YEAST (Histone H2A.Z OS=Saccharomyces cerevisiae GN=HTZ1 PE=1 SV=3)

HSP 1 Score: 137.117 bits (344), Expect = 8.752e-32
Identity = 70/107 (65.42%), Postives = 82/107 (76.64%), Query Frame = 1 
Query:  241 SRSSRAGLQFPVGRVHRLLKEXXXXXXXXXXXXXXYTAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINKSSKE 561
            S S+RAGLQFPVGR+ R LK               Y  A+LEYLTAEVLELAGNA+KDLKVKRITPRHLQLAIRGD+ELD+LI+ TIA GGV+PHI+K+L+ K  K+
Sbjct:   24 SSSARAGLQFPVGRIKRYLKRHATGRTRVGSKAAIYLTAVLEYLTAEVLELAGNAAKDLKVKRITPRHLQLAIRGDDELDSLIRATIASGGVLPHINKALLLKVEKK 130
[Close]
BLAST of CK740064 vs. ExPASy Swiss-Prot
Match: H2AZ_NEUCR (Histone H2A.Z OS=Neurospora crassa GN=htz-1 PE=3 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 1.493e-31
Identity = 70/103 (67.96%), Postives = 80/103 (77.67%), Query Frame = 1 
Query:  241 SRSSRAGLQFPVGRVHRLLKEXXXXXXXXXXXXXXYTAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINK 549
            S S+RAGLQFP GRV R LK+              Y  A+LEYLTAEVLELAGNA+KDLKVKRITPRHLQLAIRGDEELDTLI+ TIA GGV+PHI+++L+ K
Sbjct:   29 SHSARAGLQFPCGRVKRFLKQNTQNKMRVGAKAAVYVTAVLEYLTAEVLELAGNAAKDLKVKRITPRHLQLAIRGDEELDTLIRATIAFGGVLPHINRALLLK 131
[Close]
BLAST of CK740064 vs. ExPASy Swiss-Prot
Match: H2AZ_MAGGR (Histone H2A.Z OS=Magnaporthe grisea GN=HTZ1 PE=3 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 1.493e-31
Identity = 70/103 (67.96%), Postives = 80/103 (77.67%), Query Frame = 1 
Query:  241 SRSSRAGLQFPVGRVHRLLKEXXXXXXXXXXXXXXYTAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINK 549
            S S+RAGLQFP GRV R LK+              Y  A+LEYLTAEVLELAGNA+KDLKVKRITPRHLQLAIRGDEELDTLI+ TIA GGV+PHI+++L+ K
Sbjct:   28 SHSARAGLQFPCGRVKRFLKQNTQNKMRVGAKAAVYVTAVLEYLTAEVLELAGNAAKDLKVKRITPRHLQLAIRGDEELDTLIRATIAFGGVLPHINRALLLK 130
[Close]
BLAST of CK740064 vs. ExPASy Swiss-Prot
Match: H2AZ_GIBZE (Histone H2A.Z OS=Gibberella zeae GN=HTZ1 PE=3 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 1.493e-31
Identity = 70/103 (67.96%), Postives = 80/103 (77.67%), Query Frame = 1 
Query:  241 SRSSRAGLQFPVGRVHRLLKEXXXXXXXXXXXXXXYTAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINK 549
            S S+RAGLQFP GRV R LK+              Y  A+LEYLTAEVLELAGNA+KDLKVKRITPRHLQLAIRGDEELDTLI+ TIA GGV+PHI+++L+ K
Sbjct:   30 SHSARAGLQFPCGRVKRFLKQNTQQKMRVGAKAAVYVTAVLEYLTAEVLELAGNAAKDLKVKRITPRHLQLAIRGDEELDTLIRATIAYGGVLPHINRALLLK 132
[Close]
BLAST of CK740064 vs. ExPASy Swiss-Prot
Match: H2AZ_CHAGB (Histone H2A.Z OS=Chaetomium globosum GN=HTZ1 PE=3 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 1.493e-31
Identity = 70/103 (67.96%), Postives = 80/103 (77.67%), Query Frame = 1 
Query:  241 SRSSRAGLQFPVGRVHRLLKEXXXXXXXXXXXXXXYTAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINK 549
            S S+RAGLQFP GRV R LK+              Y  A+LEYLTAEVLELAGNA+KDLKVKRITPRHLQLAIRGDEELDTLI+ TIA GGV+PHI+++L+ K
Sbjct:   29 SHSARAGLQFPCGRVKRFLKQNTQNKMRVGAKAAVYVTAVLEYLTAEVLELAGNAAKDLKVKRITPRHLQLAIRGDEELDTLIRATIAFGGVLPHINRALLLK 131
[Close]
BLAST of CK740064 vs. ExPASy Swiss-Prot
Match: H2AZ_NEOFI (Histone H2A.Z OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=htz1 PE=3 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 4.803e-30
Identity = 68/103 (66.02%), Postives = 78/103 (75.73%), Query Frame = 1 
Query:  241 SRSSRAGLQFPVGRVHRLLKEXXXXXXXXXXXXXXYTAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINK 549
            S S++AGLQFP GRV R LK               Y  A+LEYLTAEVLELAGNA+KDLKVKRITPRHLQLAIRGDEELDTLI+ TIA GGV+P I+++L+ K
Sbjct:   25 SHSAKAGLQFPCGRVKRFLKNNTQNKMRVGAKAAVYVTAVLEYLTAEVLELAGNAAKDLKVKRITPRHLQLAIRGDEELDTLIRATIAFGGVLPRINRALLLK 127
[Close]
BLAST of CK740064 vs. ExPASy Swiss-Prot
Match: H2AZ_MONAN (Histone H2A.Z OS=Monascus anka GN=HTZ1 PE=3 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 4.803e-30
Identity = 68/103 (66.02%), Postives = 78/103 (75.73%), Query Frame = 1 
Query:  241 SRSSRAGLQFPVGRVHRLLKEXXXXXXXXXXXXXXYTAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINK 549
            S S++AGLQFP GRV R LK               Y  A+LEYLTAEVLELAGNA+KDLKVKRITPRHLQLAIRGDEELDTLI+ TIA GGV+P I+++L+ K
Sbjct:   24 SHSAKAGLQFPCGRVKRFLKNNTQNKMRVGAKAAVYVTAVLEYLTAEVLELAGNAAKDLKVKRITPRHLQLAIRGDEELDTLIRATIAFGGVLPRINRALLLK 126
[Close]
BLAST of CK740064 vs. ExPASy Swiss-Prot
Match: H2AZ_EMENI (Histone H2A.Z OS=Emericella nidulans GN=htz1 PE=3 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 4.803e-30
Identity = 68/103 (66.02%), Postives = 78/103 (75.73%), Query Frame = 1 
Query:  241 SRSSRAGLQFPVGRVHRLLKEXXXXXXXXXXXXXXYTAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINK 549
            S S++AGLQFP GRV R LK               Y  A+LEYLTAEVLELAGNA+KDLKVKRITPRHLQLAIRGDEELDTLI+ TIA GGV+P I+++L+ K
Sbjct:   25 SHSAKAGLQFPCGRVKRFLKNNTQNKMRVGAKAAVYVTAVLEYLTAEVLELAGNAAKDLKVKRITPRHLQLAIRGDEELDTLIRATIAFGGVLPRINRALLLK 127
[Close]
BLAST of CK740064 vs. ExPASy Swiss-Prot
Match: H2AZ_ASPOR (Histone H2A.Z OS=Aspergillus oryzae GN=HTZ1 PE=3 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 4.803e-30
Identity = 68/103 (66.02%), Postives = 78/103 (75.73%), Query Frame = 1 
Query:  241 SRSSRAGLQFPVGRVHRLLKEXXXXXXXXXXXXXXYTAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINK 549
            S S++AGLQFP GRV R LK               Y  A+LEYLTAEVLELAGNA+KDLKVKRITPRHLQLAIRGDEELDTLI+ TIA GGV+P I+++L+ K
Sbjct:   25 SHSAKAGLQFPCGRVKRFLKNNTQNKMRVGAKAAVYVTAVLEYLTAEVLELAGNAAKDLKVKRITPRHLQLAIRGDEELDTLIRATIAFGGVLPRINRALLLK 127
[Close]
BLAST of CK740064 vs. ExPASy Swiss-Prot
Match: H2AZ_ASPNC (Histone H2A.Z OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=HTZ1 PE=3 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 4.803e-30
Identity = 68/103 (66.02%), Postives = 78/103 (75.73%), Query Frame = 1 
Query:  241 SRSSRAGLQFPVGRVHRLLKEXXXXXXXXXXXXXXYTAAILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINK 549
            S S++AGLQFP GRV R LK               Y  A+LEYLTAEVLELAGNA+KDLKVKRITPRHLQLAIRGDEELDTLI+ TIA GGV+P I+++L+ K
Sbjct:   25 SHSAKAGLQFPCGRVKRFLKNNTQNKMRVGAKAAVYVTAVLEYLTAEVLELAGNAAKDLKVKRITPRHLQLAIRGDEELDTLIRATIAFGGVLPRINRALLLK 127
The following BLAST results are available for this feature:
BLAST of CK740064 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 241
Match NameE-valueIdentityDescription
H2AZ_YEAST8.752e-3265.42Histone H2A.Z OS=Saccharomyces cerevisiae GN=HTZ1 ... [more]
H2AZ_NEUCR1.493e-3167.96Histone H2A.Z OS=Neurospora crassa GN=htz-1 PE=3 S... [more]
H2AZ_MAGGR1.493e-3167.96Histone H2A.Z OS=Magnaporthe grisea GN=HTZ1 PE=3 S... [more]
H2AZ_GIBZE1.493e-3167.96Histone H2A.Z OS=Gibberella zeae GN=HTZ1 PE=3 SV=1[more]
H2AZ_CHAGB1.493e-3167.96Histone H2A.Z OS=Chaetomium globosum GN=HTZ1 PE=3 ... [more]
H2AZ_NEOFI4.803e-3066.02Histone H2A.Z OS=Neosartorya fischeri (strain ATCC... [more]
H2AZ_MONAN4.803e-3066.02Histone H2A.Z OS=Monascus anka GN=HTZ1 PE=3 SV=1[more]
H2AZ_EMENI4.803e-3066.02Histone H2A.Z OS=Emericella nidulans GN=htz1 PE=3 ... [more]
H2AZ_ASPOR4.803e-3066.02Histone H2A.Z OS=Aspergillus oryzae GN=HTZ1 PE=3 S... [more]
H2AZ_ASPNC4.803e-3066.02Histone H2A.Z OS=Aspergillus niger (strain CBS 513... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_6558 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE65A06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK740064 ID=CK740064; Name=CK740064; organism=Citrus sinensis; type=EST; length=702bp
GTCACTCGCTCTCTCTCTCACACACAAAAATCTCAAACGCTCGCTTAGCT
TTATCTCTTTCTTTCCTCTCCGATAATTTTCATCTCAGAAAAAATTAAAA
ATAATTAAATAAATAATTAATTAATTTAAAAGAAGCTGTAGAAATTAGGC
GGGAAAATGTCGGGCAAAGGAGCCAAAGGACTGATAACAGGCAAAACCAC
CATTAACAACAACAAGGATAAGGACAAGAAGAAACCCGTCTCCCGTTCTT
CTCGTGCTGGTCTTCAGTTCCCAGTGGGAAGGGTCCATCGTCTGCTAAAG
GAAAGGGCTGCTGCTCACGGAAGGGTTGGTGCAACAGCTGCTGTTTATAC
AGCAGCCATTTTGGAGTATCTAACTGCCGAAGTGTTGGAGTTGGCAGGGA
ATGCTAGCAAGGATTTGAAGGTCAAACGTATTACTCCAAGGCATTTGCAG
CTTGCTATCCGAGGAGATGAAGAACTTGACACTCTCATTAAAGGAACCAT
AGCCGGTGGAGGAGTTATTCCTCATATCCACAAGTCCCTCATCAATAAAT
CCTCCAAAGAGTAGTTCGTGACACCATCATCCTCTCGGCTTTGTTTATGT
GTGTACTTTTAGCTGTGCTGAAATATCTAAATGAGAAATGATGCCAGAGA
TGTGTAATGCTAGGAATCTGCATTCTTCAATCTTCATTTCATGCAGCGAC
GA
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