CK740078

Overview
NameCK740078
Unique NameCK740078
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length613
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK740078 vs. ExPASy Swiss-Prot
Match: RAP_TAROF (Root allergen protein OS=Taraxacum officinale PE=1 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 4.820e-22
Identity = 50/128 (39.06%), Postives = 81/128 (63.28%), Query Frame = 3
Query:   69 EREYPAAVGASRMFKAFV-DSPNLLPKATPQAFKSIEVLEGDGGVGTVTLWTFPDGGHYKQVKQRIDALDNDNFTCKYTMYDGDGILAVAEKGVYDVKIEASGNGGCVYKFAAEVYVKDGEELKEEHV 449
            E E  +++  S +FKAFV D   + PKA P+ +KSI+ +EGDGGVGT+   T+ DG  +   K ++DA+D++NF+  YT+++GD ++ + E G + +K   S +GG VYK +     K   +L +E+V
Sbjct:    5 EFEITSSLSPSNIFKAFVIDFDTIAPKAEPETYKSIKTIEGDGGVGTIKSITYSDGVPFTSSKHKVDAIDSNNFSISYTIFEGDVLMGIIESGTHHLKFLPSADGGSVYKHSMVFKCKGDAKLTDENV 132          
BLAST of CK740078 vs. ExPASy Swiss-Prot
Match: MPAC1_CARBE (Major pollen allergen Car b 1 isoforms 1A and 1B OS=Carpinus betulus PE=1 SV=2)

HSP 1 Score: 103.605 bits (257), Expect = 8.222e-22
Identity = 53/138 (38.41%), Postives = 85/138 (61.59%), Query Frame = 3
Query:   51 MGVTRFEREYPAAVGASRMFKAFV-DSPNLLPKATPQAFKSIEVLEGDGGVGTVTLWTFPDGGHYKQVKQRIDALDNDNFTCKYTMYDGDGILAVAEKGVYDVKIEASGNGGCVYKFAAEVYVKDGEELKEEHVKDAE 461
            MGV  +E E P+ + A+R+FK++V D   L+PK  PQ   S+E + G+GG GT+   TF +G  +K VK+R+D +DN NF   YT+ +GD +    EK  +++KI A+  GG + K +++ + K   E+  E +K A+
Sbjct:    1 MGVFNYEAETPSVIPAARLFKSYVLDGDKLIPKVAPQVISSVENVGGNGGPGTIKNITFAEGIPFKFVKERVDEVDNANFKYNYTVIEGDVLGDKLEKVSHELKIVAAPGGGSIVKISSKFHAKGYHEVNAEKMKGAK 138          
BLAST of CK740078 vs. ExPASy Swiss-Prot
Match: IPRT1_CATRO (Probable intracellular pathogenesis-related protein T1 OS=Catharanthus roseus GN=PCKR3 PE=1 SV=2)

HSP 1 Score: 101.679 bits (252), Expect = 1.128e-21
Identity = 52/135 (38.52%), Postives = 81/135 (60.00%), Query Frame = 3
Query:   51 MGVTRFEREYPAAVGASRMFKAFV-DSPNLLPKATPQAFKSIEVLEGDGGVGTVTLWTFPDGGHYKQVKQRIDALDNDNFTCKYTMYDGDGILAVAEKGVYDVKIEASGNGGCVYKFAAEVYVKDGEELKEEHVK 452
            MGV  ++ E  +++ A+++FKAFV D   L+ KA P   KS+E+L+GDGG GT+ L  F +GG    VK  ++ LD DN + KY++ DG+ ++   +   Y +KIE SG+G  V K     + K G  + E+ +K
Sbjct:    1 MGVISYDMEIKSSLSAAKLFKAFVLDVGTLINKALPNVIKSVEILQGDGGAGTIKLVHFGEGGPVPSVKHHVEELDKDNMSYKYSIVDGEALMPGLQSISYVIKIEPSGHGS-VCKHNTTFHFKAGSNINEDEIK 134          

HSP 2 Score: 21.9422 bits (45), Expect = 1.128e-21
Identity = 8/14 (57.14%), Postives = 11/14 (78.57%), Query Frame = 2
Query:  476 LYKVLEAYLVANPD 517
            + K +EAY+ ANPD
Sbjct:  143 MIKAVEAYVQANPD 156          
BLAST of CK740078 vs. ExPASy Swiss-Prot
Match: PRS2_SOLTU (Pathogenesis-related protein STH-2 OS=Solanum tuberosum GN=STH-2 PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.909e-21
Identity = 55/140 (39.29%), Postives = 78/140 (55.71%), Query Frame = 3
Query:   51 MGVTRFEREYPAAVGASRMFKAFV-DSPNLLPKATPQAFKSIEVLEGDGGVGTVTLWTFPDGGHYKQVKQRIDALDNDNFTCKYTMYDGDGILAVAEKGVYDVKIEASGNGGCVYKFAAEVYVKDGEELKEEHVKDAERE 467
            MGVT +  E    +  +R+FKA V DS NL+PK  PQ  K+IE  EGDG +  +    F +G   K +K +I  +D+ N   KY+M +GD +    E   YD+K EA GNGGCV K   E + K    LK+E   + +++
Sbjct:    1 MGVTSYTHETTTPIAPTRLFKALVVDSDNLIPKLMPQV-KNIEA-EGDGSIKKMN---FVEGSPIKYLKHKIHVVDDKNLVTKYSMIEGDVLGDKLESISYDLKFEAHGNGGCVCKSITEYHTKGDYVLKDEEHNEGQKQ 135          

HSP 2 Score: 30.0314 bits (66), Expect = 1.909e-21
Identity = 11/17 (64.71%), Postives = 16/17 (94.12%), Query Frame = 2
Query:  476 LYKVLEAYLVANPDLYA 526
            L+K++EAYL+ANP +YA
Sbjct:  139 LFKIVEAYLLANPSVYA 155          
BLAST of CK740078 vs. ExPASy Swiss-Prot
Match: PR1_MEDSA (Class-10 pathogenesis-related protein 1 OS=Medicago sativa GN=MSPR10-1 PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 4.485e-20
Identity = 50/135 (37.04%), Postives = 75/135 (55.56%), Query Frame = 3
Query:   51 MGVTRFEREYPAAVGASRMFKAFV-DSPNLLPKATPQAFKSIEVLEGDGGVGTVTLWTFPDGGHYKQVKQRIDALDNDNFTCKYTMYDGDGILAVAEKGVYDVKIEASGNGGCVYKFAAEVYVKDGEELKEEHVK 452
            MGV  FE E  + V  +R++KA V DS NL+PK    A +SIE++EG+GG GT+   TF +GG  K    ++D +D+ NF   Y++  G G+    EK  ++ K+ A  +GG   K   + + K      EE +K
Sbjct:    1 MGVFNFEDETTSIVAPARLYKALVTDSDNLIPKVI-DAIQSIEIVEGNGGAGTIKKLTFVEGGETKYDLHKVDLVDDVNFAYNYSIVGGGGLPDTVEKISFESKLSAGPDGGSTAKLTVKYFTKGDAAPSEEEIK 134          

HSP 2 Score: 27.335 bits (59), Expect = 4.485e-20
Identity = 10/15 (66.67%), Postives = 13/15 (86.67%), Query Frame = 2
Query:  473 GLYKVLEAYLVANPD 517
            GL+K LE Y++ANPD
Sbjct:  142 GLFKALEGYVLANPD 156          
BLAST of CK740078 vs. ExPASy Swiss-Prot
Match: DRR4_PEA (Disease resistance response protein DRRG49-C OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.050e-18
Identity = 45/137 (32.85%), Postives = 73/137 (53.28%), Query Frame = 3
Query:   51 MGVTRFEREYPAAVGASRMFKAFVDSPNLLPKATPQAFKSIEVLEGDGGVGTVTLWTFPDGGHYKQVKQRIDALDNDNFTCKYTMYDGDGILAVAEKGVYDVKIEASGNGGCVYKFAAEVYVKDGEELKEEHVKDAE 461
            MGV  FE E  + V  + + KA V   ++L      A KSIE++EG+GG GT+   TF + G  K V  +++ +D+ N+   Y++  G G+    EK  ++ K+ A  NGG + K + + Y K      EE +K+ +
Sbjct:    1 MGVFNFEEEATSIVAPATLHKALVTDADILTPKVIDAIKSIEIVEGNGGPGTIKKLTFVEDGETKYVLHKVELVDDANWANNYSIVGGVGLPDTVEKISFEAKLSAGPNGGSIAKLSVKYYTKGDAIPSEEEIKNGK 137          

HSP 2 Score: 26.9498 bits (58), Expect = 1.050e-18
Identity = 10/15 (66.67%), Postives = 12/15 (80.00%), Query Frame = 2
Query:  473 GLYKVLEAYLVANPD 517
            G++K LE Y VANPD
Sbjct:  142 GIFKALEGYCVANPD 156          
BLAST of CK740078 vs. ExPASy Swiss-Prot
Match: L18B_LUPLU (Protein LlR18B OS=Lupinus luteus GN=LLR18B PE=1 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.367e-18
Identity = 51/141 (36.17%), Postives = 80/141 (56.74%), Query Frame = 3
Query:   51 MGVTRFEREYPAAVGASRMFKAFV-DSPNLLPKATPQAFKSIEVLEGDGGVGTVTLWTFPDGGHYKQVKQRIDALDNDNFTCKYTMYDGDGILAVAEKGVYDVKIEASGNGGCVYKFAAEVYVKDGEELKEEHVKDAEREE 470
            MGV  FE E+P+AV  +++FKA   DS +++PK   Q  +S+E++EG+GG GTV   T   GGH   V  +IDA+D  +F   Y++  G G+    EK  ++ K+ +  +GG + K   + + K       + + DA REE
Sbjct:    1 MGVFAFEDEHPSAVAQAKLFKALTKDSDDIIPKVIEQ-IQSVEIVEGNGGPGTVKKITASHGGHTSYVLHKIDAIDEASFEYNYSIVGGTGLDESLEKITFESKLLSGPDGGSIGKIKVKFHTKG------DVLSDAVREE 134          

HSP 2 Score: 26.1794 bits (56), Expect = 1.367e-18
Identity = 9/16 (56.25%), Postives = 14/16 (87.50%), Query Frame = 2
Query:  470 TGLYKVLEAYLVANPD 517
            TGL+K +E Y++ANP+
Sbjct:  140 TGLFKAVEGYVLANPN 155          
BLAST of CK740078 vs. ExPASy Swiss-Prot
Match: PR13_PETCR (Pathogenesis-related protein B OS=Petroselinum crispum GN=PCPR1-3 PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 1.778e-18
Identity = 53/137 (38.69%), Postives = 73/137 (53.28%), Query Frame = 3
Query:   51 MGVTRFEREYPAAVGASRMFKAF-VDSPNLLPKATPQAFKSIEVLEGDGGVGTVTLWTFPDGGHYKQVKQRIDALDNDNFTCKYTMYDGDGILAVAEKGVYDVKIEASGNGGCVYKFAAEVYVKDGEELKEEHVKDA 458
            MGV + E E  ++V A ++FK   +D   LLP+  P A KS E LEGDGGVGTV L    D   +K +KQ++DA+D   FT  Y++ DGD +L   E          + +GGC  K       K    + EE++K A
Sbjct:    1 MGVQKSEVEATSSVSAEKLFKGLCLDIDTLLPRVLPGAIKSSETLEGDGGVGTVKLVHLGDASPFKTMKQKVDAIDKATFTYSYSIIDGDILLGFIESINNHFTAVPNADGGCTVKSTIIFNTKGDAVVPEENIKFA 137          

HSP 2 Score: 21.557 bits (44), Expect = 1.778e-18
Identity = 7/12 (58.33%), Postives = 11/12 (91.67%), Query Frame = 2
Query:  476 LYKVLEAYLVAN 511
            ++K +EAYL+AN
Sbjct:  144 IFKAVEAYLIAN 155          
BLAST of CK740078 vs. ExPASy Swiss-Prot
Match: PR11_PETCR (Pathogenesis-related protein A OS=Petroselinum crispum GN=PCPR1-1 PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 2.313e-18
Identity = 53/137 (38.69%), Postives = 73/137 (53.28%), Query Frame = 3
Query:   51 MGVTRFEREYPAAVGASRMFKAF-VDSPNLLPKATPQAFKSIEVLEGDGGVGTVTLWTFPDGGHYKQVKQRIDALDNDNFTCKYTMYDGDGILAVAEKGVYDVKIEASGNGGCVYKFAAEVYVKDGEELKEEHVKDA 458
            MGV + E E  ++V A ++FK   +D   LLP+  P A KS E LEGDGGVGTV L    D   +K +KQ++DA+D   FT  Y++ DGD +L   E          + +GGC  K       K    + EE++K A
Sbjct:    1 MGVQKSEVETTSSVSAEKLFKGLCLDIDTLLPQVLPGAIKSSETLEGDGGVGTVKLVHLGDASPFKTMKQKVDAIDKATFTYSYSIIDGDILLGFIESINNHFTAVPNADGGCTVKSTIIFNTKGDAVVPEENIKFA 137          

HSP 2 Score: 21.557 bits (44), Expect = 2.313e-18
Identity = 7/12 (58.33%), Postives = 11/12 (91.67%), Query Frame = 2
Query:  476 LYKVLEAYLVAN 511
            ++K +EAYL+AN
Sbjct:  144 IFKAVEAYLIAN 155          
BLAST of CK740078 vs. ExPASy Swiss-Prot
Match: ALL1_APIGR (Major allergen Api g 1 OS=Apium graveolens PE=1 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 3.915e-18
Identity = 50/140 (35.71%), Postives = 78/140 (55.71%), Query Frame = 3
Query:   51 MGVTRFEREYPAAVGASRMFKAFV-DSPNLLPKATPQAFKSIEVLEGDGGVGTVTLWTFPDGGHYKQVKQRIDALDNDNFTCKYTMYDGDGILAVAEKGVYDVKIEASGNGGCVYKFAAEVYVKDGEELKEEHVKDAERE 467
            MGV     E  ++V A ++F+ FV D   +LPKA P A+KS+E+ +GDGG GT+ + T PDGG    +  RID ++ +  T  Y++ DGD +L   E     V +  + +GG + K  A  + K    + EE++K A  +
Sbjct:    1 MGVQTHVLELTSSVSAEKIFQGFVIDVDTVLPKAAPGAYKSVEI-KGDGGPGTLKIITLPDGGPITTMTLRIDGVNKEALTFDYSVIDGDILLGFIESIENHVVLVPTADGGSICKTTAIFHTKGDAVVPEENIKYANEQ 139          

HSP 2 Score: 25.409 bits (54), Expect = 3.915e-18
Identity = 10/14 (71.43%), Postives = 12/14 (85.71%), Query Frame = 2
Query:  470 TGLYKVLEAYLVAN 511
            T L+K LEAYL+AN
Sbjct:  141 TALFKALEAYLIAN 154          
The following BLAST results are available for this feature:
BLAST of CK740078 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 44
Match NameE-valueIdentityDescription
RAP_TAROF4.820e-2239.06Root allergen protein OS=Taraxacum officinale PE=1... [more]
MPAC1_CARBE8.222e-2238.41Major pollen allergen Car b 1 isoforms 1A and 1B O... [more]
IPRT1_CATRO1.128e-2138.52Probable intracellular pathogenesis-related protei... [more]
PRS2_SOLTU1.909e-2139.29Pathogenesis-related protein STH-2 OS=Solanum tube... [more]
PR1_MEDSA4.485e-2037.04Class-10 pathogenesis-related protein 1 OS=Medicag... [more]
DRR4_PEA1.050e-1832.85Disease resistance response protein DRRG49-C OS=Pi... [more]
L18B_LUPLU1.367e-1836.17Protein LlR18B OS=Lupinus luteus GN=LLR18B PE=1 SV... [more]
PR13_PETCR1.778e-1838.69Pathogenesis-related protein B OS=Petroselinum cri... [more]
PR11_PETCR2.313e-1838.69Pathogenesis-related protein A OS=Petroselinum cri... [more]
ALL1_APIGR3.915e-1835.71Major allergen Api g 1 OS=Apium graveolens PE=1 SV... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_6572 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE65B08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK740078 ID=CK740078; Name=CK740078; organism=Citrus sinensis; type=EST; length=613bp
GCAAAAATATATCCATTTCTTTCTCTTTAAGCTAATAAATTATTATCAAC
ATGGGTGTCACTCGCTTTGAGAGAGAGTATCCGGCTGCTGTTGGTGCATC
AAGAATGTTCAAGGCTTTTGTTGACTCTCCCAATTTGTTGCCGAAGGCCA
CACCGCAAGCATTCAAGAGCATCGAGGTTCTCGAAGGAGATGGAGGCGTT
GGCACTGTCACGCTGTGGACCTTTCCTGATGGTGGTCATTACAAGCAAGT
GAAGCAAAGAATCGACGCACTTGACAATGACAATTTCACATGCAAGTACA
CCATGTACGACGGAGATGGGATCTTGGCAGTTGCAGAGAAAGGGGTGTAC
GATGTTAAGATCGAGGCTTCTGGCAATGGGGGATGCGTTTACAAGTTTGC
CGCGGAGGTCTACGTGAAGGATGGTGAAGAGCTCAAAGAAGAGCACGTCA
AGGACGCCGAAAGAGAGGAACGGGATTGTACAAGGTCCTGGAAGCCTATC
TAGTGGCTAACCCTGATCTCTACGCCTAAATTAATTAATCAATCATCACC
ATGCTTTGGCTTTTCCAGTTTCGATCGTCTGCTGCTTGCTATTTGAATAA
GTTTCGGTGACAT
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