CK740078

Overview
NameCK740078
Unique NameCK740078
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length613
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK740078 vs. ExPASy Swiss-Prot
Match: RNS1_PANGI (Ribonuclease 1 OS=Panax ginseng PE=1 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 5.515e-18
Identity = 52/136 (38.24%), Postives = 76/136 (55.88%), Query Frame = 3
Query:   54 GVTRFEREYPAAVGASRMFKAFV-DSPNLLPKATPQAFKSIEVLEGDGGVGTVTLWTFPDGGHYKQVKQRIDALDNDNFTCKYTMYDGDGILAVAEKGVYDVKIEASGNGGCVYKFAAEVYVKDGEELKEEHVKDA 458
            GV + E E  + V A +++   + D  ++LPKA PQA KS E++EGDGGVGTV L T  +   +  +KQRIDA+D D  T  Y++  GD +L + E  V    I  + +GG + K            + EE++KDA
Sbjct:    1 GVQKTEVEATSTVPAQKLYAGLLLDIDDILPKAFPQAIKSSEIIEGDGGVGTVKLVTLGEASQFNTMKQRIDAIDKDALTYTYSIIGGDILLDIIESIVNHFTIVPTPDGGSIVKNTTIYNTIGDAVIPEENIKDA 136          
BLAST of CK740078 vs. ExPASy Swiss-Prot
Match: PR2_PETCR (Pathogenesis-related protein 2 OS=Petroselinum crispum GN=PR2 PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 3.193e-17
Identity = 48/141 (34.04%), Postives = 78/141 (55.32%), Query Frame = 3
Query:   51 MGVTRFEREYPAAVGASRMFKAFV-DSPNLLPKATPQAFKSIEVLEGDGGVGTVTLWTFPDGGHYKQVKQRIDALDNDNFTCKYTMYDGDGILAVAEKGVYDVKIEASGNGGCVYKFAAEVYVKDGEE-LKEEHVKDAERE 467
            MG    + E  ++V A  ++K F+ D  N++PK  PQA KSIE++ GDGG GT+   T  +   +  VKQRID +D +     Y++ +GD +L + E       +  + +GGC+ K    +Y   G+  + EE+VK+A  +
Sbjct:    1 MGAVTTDVEVASSVPAQTIYKGFLLDMDNIIPKVLPQAIKSIEIISGDGGAGTIKKVTLGEVSQFTVVKQRIDEIDAEALKYSYSIIEGDLLLGIIESITSKFTVVPT-DGGCIVK-NTTIYTPIGDAVIPEENVKEATEQ 139          

HSP 2 Score: 25.409 bits (54), Expect = 3.193e-17
Identity = 9/16 (56.25%), Postives = 13/16 (81.25%), Query Frame = 2
Query:  476 LYKVLEAYLVANPDLY 523
            ++K +EAYL+ANP  Y
Sbjct:  143 VFKAIEAYLLANPGAY 158          
BLAST of CK740078 vs. ExPASy Swiss-Prot
Match: ALL2_APIGR (Major allergen Api g 2 OS=Apium graveolens PE=1 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 6.098e-17
Identity = 49/137 (35.77%), Postives = 73/137 (53.28%), Query Frame = 3
Query:   51 MGVTRFEREYPAAVGASRMFKAFV-DSPNLLPKATPQAFKSIEVLEGDGGVGTVTLWTFPDGGHYKQVKQRIDALDNDNFTCKYTMYDGDGILAVAEKGVYDVKIEASGNGGCVYKFAAEVYVKDGEELKEEHVKDA 458
            MGV +   E P+ V A +M++ F+ D   + PK  PQ  KS+E+LEGDGGVGTV L    +   Y  +KQ++D +D       YT   GD ++ V E  V +  +  + +GGC+ K       K    L E+ +K+A
Sbjct:    1 MGVQKTVVEAPSTVSAEKMYQGFLLDMDTVFPKVLPQLIKSVEILEGDGGVGTVKLVHLGEATEYTTMKQKVDVIDKAGLAYTYTTIGGDILVDVLESVVNEFVVVPT-DGGCIVKNTTIYNTKGDAVLPEDKIKEA 136          
BLAST of CK740078 vs. ExPASy Swiss-Prot
Match: DRR3_PEA (Disease resistance response protein Pi49 OS=Pisum sativum GN=DRR49A PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 9.124e-17
Identity = 47/135 (34.81%), Postives = 71/135 (52.59%), Query Frame = 3
Query:   51 MGVTRFEREYPAAVGASRMFKAFV-DSPNLLPKATPQAFKSIEVLEGDGGVGTVTLWTFPDGGHYKQVKQRIDALDNDNFTCKYTMYDGDGILAVAEKGVYDVKIEASGNGGCVYKFAAEVYVKDGEELKEEHVK 452
            MGV   E E  + V  + ++KA V D+ NL PK    A KSIE++EG+GG GT+   TF + G  K V  +++ +D  N    Y++  G G     EK  ++ K+ A  NGG + K + + + K      EE +K
Sbjct:    1 MGVFNVEDEITSVVAPAILYKALVTDADNLTPKVI-DAIKSIEIVEGNGGAGTIKKLTFVEDGETKHVLHKVELVDVANLAYNYSIVGGVGFPDTVEKISFEAKLSAGPNGGSIAKLSVKYFTKGDAAPSEEQLK 134          

HSP 2 Score: 24.6386 bits (52), Expect = 9.124e-17
Identity = 9/15 (60.00%), Postives = 12/15 (80.00%), Query Frame = 2
Query:  473 GLYKVLEAYLVANPD 517
            GL+K LE Y +A+PD
Sbjct:  142 GLFKALEGYCLAHPD 156          
BLAST of CK740078 vs. ExPASy Swiss-Prot
Match: PR1_PHAVU (Pathogenesis-related protein 1 OS=Phaseolus vulgaris PE=1 SV=2)

HSP 1 Score: 82.4185 bits (202), Expect = 1.188e-16
Identity = 44/135 (32.59%), Postives = 73/135 (54.07%), Query Frame = 3
Query:   51 MGVTRFEREYPAAVGASRMFKAFV-DSPNLLPKATPQAFKSIEVLEGDGGVGTVTLWTFPDGGHYKQVKQRIDALDNDNFTCKYTMYDGDGILAVAEKGVYDVKIEASGNGGCVYKFAAEVYVKDGEELKEEHVK 452
            MGV  FE +  + V  + ++KA   D+  + PKA P +FKS+E++EG+GG GT+   +F + G  K V  +I+++D  N    Y++  G  +   AEK  +D K+    NGG + K +   + K      E+ +K
Sbjct:    1 MGVFTFEDQTTSPVAPATLYKAVAKDADTIFPKALPDSFKSVEIVEGNGGPGTIKKISFVEDGETKFVLHKIESIDEANLGYSYSIVGGVALPETAEKITFDSKLSDGPNGGSLIKLSITYHSKGDAPPNEDELK 135          

HSP 2 Score: 24.2534 bits (51), Expect = 1.188e-16
Identity = 9/13 (69.23%), Postives = 12/13 (92.31%), Query Frame = 2
Query:  476 LYKVLEAYLVANP 514
            L+K +EAYL+ANP
Sbjct:  144 LFKAVEAYLLANP 156          
BLAST of CK740078 vs. ExPASy Swiss-Prot
Match: ABR18_PEA (ABA-responsive protein ABR18 OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 1.542e-16
Identity = 43/137 (31.39%), Postives = 75/137 (54.74%), Query Frame = 3
Query:   51 MGVTRFEREYPAAVGASRMFKAFVDSPNLLPKATPQAFKSIEVLEGDGGVGTVTLWTFPDGGHYKQVKQRIDALDNDNFTCKYTMYDGDGILAVAEKGVYDVKIEASGNGGCVYKFAAEVYVKDGEELKEEHVKDAE 461
            MGV  +E +  + V  +++FKA V   +L+      + K++E+LEG+GG GTV   TF +GG    V  +++A+D+  F   Y++  G GI  + EK  ++ K+    NGG V K   + + K   +  E+ V++ +
Sbjct:    1 MGVFTYENDTTSTVPPAKLFKAVVHDADLIVPKVVDSIKTVEILEGNGGPGTVKKLTFVEGGQTLYVLHKVEAIDDAKFEYNYSIVGGVGISDIVEKISFEAKLFEGPNGGSVGKMIVKYHTKGDAKPIEKEVEEGK 137          

HSP 2 Score: 23.8682 bits (50), Expect = 1.542e-16
Identity = 8/14 (57.14%), Postives = 13/14 (92.86%), Query Frame = 2
Query:  476 LYKVLEAYLVANPD 517
            L+K +EAY++ANP+
Sbjct:  143 LFKAIEAYVLANPN 156          
BLAST of CK740078 vs. ExPASy Swiss-Prot
Match: SAM22_SOYBN (Stress-induced protein SAM22 OS=Glycine max PE=1 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 1.542e-16
Identity = 48/135 (35.56%), Postives = 74/135 (54.81%), Query Frame = 3
Query:   51 MGVTRFEREYPAAVGASRMFKAFV-DSPNLLPKATPQAFKSIEVLEGDGGVGTVTLWTFPDGGHYKQVKQRIDALDNDNFTCKYTMYDGDGILAVAEKGVYDVKIEASGNGGCVYKFAAEVYVKDGEELKEEHVK 452
            MGV  FE E  + V  + ++KA V D+ N++PKA   +FKS+E +EG+GG GT+   TF + G  K V  +I+++D  N    Y++  G  +   AEK  +D K+ A  NGG   K   +   K   E  ++ +K
Sbjct:    1 MGVFTFEDEINSPVAPATLYKALVTDADNVIPKAL-DSFKSVENVEGNGGPGTIKKITFLEDGETKFVLHKIESIDEANLGYSYSVVGGAALPDTAEKITFDSKLVAGPNGGSAGKLTVKYETKGDAEPNQDELK 134          

HSP 2 Score: 25.0238 bits (53), Expect = 1.542e-16
Identity = 9/14 (64.29%), Postives = 13/14 (92.86%), Query Frame = 2
Query:  476 LYKVLEAYLVANPD 517
            L+K +EAYL+A+PD
Sbjct:  143 LFKAIEAYLLAHPD 156          
BLAST of CK740078 vs. ExPASy Swiss-Prot
Match: RNS2_PANGI (Ribonuclease 2 OS=Panax ginseng PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 4.415e-16
Identity = 50/137 (36.50%), Postives = 78/137 (56.93%), Query Frame = 3
Query:   54 GVTRFEREYPAAVGASRMFK-AFVDSPNLLPKATPQAFKSIEVLEGDGGVGTVTLWTFPDGGHYKQVKQRIDALDNDNFTCKYTMYDGDGILAVAEKGVYDVKIEASGNGGCVYKFAAEVYVKDGEE-LKEEHVKDA 458
            GV + E +  + V A ++FK +F+D   ++PKA P+  KS++VLEG+GGVGT+   T  D   +  +K RIDA+D   FT  YT+  GD +L + E      KI  +  G  + +    +Y   G+  + EE++KDA
Sbjct:    1 GVQKTETQAISPVPAEKLFKGSFLDMDTVVPKAFPEGIKSVQVLEGNGGVGTIKNVTLGDATPFNTMKTRIDAIDEHAFTYTYTIIGGDILLDIIESIENHFKIVPTDGGSTITQ--TTIYNTIGDAVIPEENIKDA 135          

HSP 2 Score: 21.557 bits (44), Expect = 4.415e-16
Identity = 8/12 (66.67%), Postives = 11/12 (91.67%), Query Frame = 2
Query:  476 LYKVLEAYLVAN 511
            L+K +EAYL+AN
Sbjct:  142 LFKAVEAYLLAN 153          
BLAST of CK740078 vs. ExPASy Swiss-Prot
Match: DRR1_PEA (Disease resistance response protein Pi176 OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 7.442e-16
Identity = 45/135 (33.33%), Postives = 68/135 (50.37%), Query Frame = 3
Query:   51 MGVTRFEREYPAAVGASRMFKAFVDSPNLLPKATPQAFKSIEVLEGDGGVGTVTLWTFPDGGHYKQVKQRIDALDNDNFTCKYTMYDGDGILAVAEKGVYDVKIEASGNGGCVYKFAAEVYVK-DGEELKEEHVK 452
            MGV   E E  + V  + ++KA V   + L      A KSIE++EG+GG GT+   TF + G  K V  +++ +D  N    Y++  G G     EK  ++ K+ A  NGG + K + + Y K D     EE +K
Sbjct:    1 MGVFNVEDEITSVVAPAILYKALVTDADTLTPKVIDAIKSIEIVEGNGGAGTIKKLTFVEDGETKHVLHKVELVDVANLAYNYSIVGGVGFPDTVEKISFEAKLSAGPNGGSIAKLSVKYYTKGDAAAPTEEQLK 135          

HSP 2 Score: 24.2534 bits (51), Expect = 7.442e-16
Identity = 9/15 (60.00%), Postives = 12/15 (80.00%), Query Frame = 2
Query:  473 GLYKVLEAYLVANPD 517
            GL+K LE Y +A+PD
Sbjct:  143 GLFKALERYCLAHPD 157          
BLAST of CK740078 vs. ExPASy Swiss-Prot
Match: DAU1_DAUCA (Major allergen Dau c 1 OS=Daucus carota PE=1 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 1.638e-15
Identity = 46/140 (32.86%), Postives = 74/140 (52.86%), Query Frame = 3
Query:   51 MGVTRFEREYPAAVGASRMFKAFV-DSPNLLPKATPQAFKSIEVLEGDGGVGTVTLWTFPDGGHYKQVKQRIDALDNDNFTCKYTMYDGDGILAVAEKGVYDVKIEASGNGGCVYKFAAEVYVKDGEELKEEHVKDAERE 467
            MG      E  ++V A ++F   V D   ++PKA P A+KS+EV +GDGG GTV + T P+G     +  R DA++ +  T   T+ DGD +L   E     + +  + +GG + K  A  + K    + EE++K A+ +
Sbjct:    1 MGAQSHSLEITSSVSAEKIFSGIVLDVDTVIPKAAPGAYKSVEV-KGDGGAGTVRIITLPEGSPITSMTVRTDAVNKEALTYDSTVIDGDILLGFIESIETHLVVVPTADGGSITKTTAIFHTKGDAVVPEENIKFADAQ 139          

HSP 2 Score: 24.6386 bits (52), Expect = 1.638e-15
Identity = 9/14 (64.29%), Postives = 12/14 (85.71%), Query Frame = 2
Query:  470 TGLYKVLEAYLVAN 511
            T L+K +EAYL+AN
Sbjct:  141 TALFKAIEAYLIAN 154          
The following BLAST results are available for this feature:
BLAST of CK740078 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 44
Match NameE-valueIdentityDescription
RNS1_PANGI5.515e-1838.24Ribonuclease 1 OS=Panax ginseng PE=1 SV=1[more]
PR2_PETCR3.193e-1734.04Pathogenesis-related protein 2 OS=Petroselinum cri... [more]
ALL2_APIGR6.098e-1735.77Major allergen Api g 2 OS=Apium graveolens PE=1 SV... [more]
DRR3_PEA9.124e-1734.81Disease resistance response protein Pi49 OS=Pisum ... [more]
PR1_PHAVU1.188e-1632.59Pathogenesis-related protein 1 OS=Phaseolus vulgar... [more]
ABR18_PEA1.542e-1631.39ABA-responsive protein ABR18 OS=Pisum sativum PE=2... [more]
SAM22_SOYBN1.542e-1635.56Stress-induced protein SAM22 OS=Glycine max PE=1 S... [more]
RNS2_PANGI4.415e-1636.50Ribonuclease 2 OS=Panax ginseng PE=1 SV=1[more]
DRR1_PEA7.442e-1633.33Disease resistance response protein Pi176 OS=Pisum... [more]
DAU1_DAUCA1.638e-1532.86Major allergen Dau c 1 OS=Daucus carota PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_6572 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE65B08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK740078 ID=CK740078; Name=CK740078; organism=Citrus sinensis; type=EST; length=613bp
GCAAAAATATATCCATTTCTTTCTCTTTAAGCTAATAAATTATTATCAAC
ATGGGTGTCACTCGCTTTGAGAGAGAGTATCCGGCTGCTGTTGGTGCATC
AAGAATGTTCAAGGCTTTTGTTGACTCTCCCAATTTGTTGCCGAAGGCCA
CACCGCAAGCATTCAAGAGCATCGAGGTTCTCGAAGGAGATGGAGGCGTT
GGCACTGTCACGCTGTGGACCTTTCCTGATGGTGGTCATTACAAGCAAGT
GAAGCAAAGAATCGACGCACTTGACAATGACAATTTCACATGCAAGTACA
CCATGTACGACGGAGATGGGATCTTGGCAGTTGCAGAGAAAGGGGTGTAC
GATGTTAAGATCGAGGCTTCTGGCAATGGGGGATGCGTTTACAAGTTTGC
CGCGGAGGTCTACGTGAAGGATGGTGAAGAGCTCAAAGAAGAGCACGTCA
AGGACGCCGAAAGAGAGGAACGGGATTGTACAAGGTCCTGGAAGCCTATC
TAGTGGCTAACCCTGATCTCTACGCCTAAATTAATTAATCAATCATCACC
ATGCTTTGGCTTTTCCAGTTTCGATCGTCTGCTGCTTGCTATTTGAATAA
GTTTCGGTGACAT
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