CK740078

Overview
NameCK740078
Unique NameCK740078
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length613
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK740078 vs. ExPASy Swiss-Prot
Match: PR2_PHAVU (Pathogenesis-related protein 2 OS=Phaseolus vulgaris PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 7.888e-15
Identity = 44/135 (32.59%), Postives = 72/135 (53.33%), Query Frame = 3
Query:   51 MGVTRFEREYPAAVGASRMFKAFV-DSPNLLPKATPQAFKSIEVLEGDGGVGTVTLWTFPDGGHYKQVKQRIDALDNDNFTCKYTMYDGDGILAVAEKGVYDVKIEASGNGGCVYKFAAEVYVKDGEELKEEHVK 452
            M V  FE +  + V  + ++KA V D+  ++PKA   +FKS+E++EG+GG GT+   +F + G  K V  +I+ +D  N    Y++  G  +   AEK   D K+    NGG V K + + + K      E+ +K
Sbjct:    1 MAVFTFEDQTTSPVAPATLYKALVKDADTIVPKAV-DSFKSVEIVEGNGGPGTIKKISFVEDGETKFVLHKIEEIDEANLGYSYSIVGGAALPDTAEKISIDSKLSDGPNGGSVVKLSIKYHSKGDAPPNEDELK 134          

HSP 2 Score: 26.1794 bits (56), Expect = 7.888e-15
Identity = 10/13 (76.92%), Postives = 13/13 (100.00%), Query Frame = 2
Query:  476 LYKVLEAYLVANP 514
            L+KV+EAYL+ANP
Sbjct:  143 LFKVIEAYLLANP 155          
BLAST of CK740078 vs. ExPASy Swiss-Prot
Match: ABR17_PEA (ABA-responsive protein ABR17 OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 2.923e-14
Identity = 41/136 (30.15%), Postives = 74/136 (54.41%), Query Frame = 3
Query:   51 MGVTRFEREYPAAVGASRMFKAFV-DSPNLLPKATPQAFKSIEVLEGDGGVGTVTLWTFPDGGHYKQVKQRIDALDNDNFTCKYTMYDGDGILAVAEKGVYDVKIEASGNGGCVYKFAAEVYVKDGEELKEEHVKD 455
            MGV  F+ EY + V   +++KA   D+  ++PK   +A + +E++EG+GG GT+   +  + G    V  ++DA+D  NF   Y++  G G+    EK  ++  I A  +GG + K + + + K G+    + V+D
Sbjct:    1 MGVFVFDDEYVSTVAPPKLYKALAKDADEIVPKVIKEA-QGVEIIEGNGGPGTIKKLSILEDGKTNYVLHKLDAVDEANFGYNYSLVGGPGLHESLEKVAFETIILAGSDGGSIVKISVKYHTK-GDAALSDAVRD 134          

HSP 2 Score: 24.6386 bits (52), Expect = 2.923e-14
Identity = 9/15 (60.00%), Postives = 12/15 (80.00%), Query Frame = 2
Query:  470 TGLYKVLEAYLVANP 514
            TGL K +E Y++ANP
Sbjct:  141 TGLIKAIEGYVLANP 155          
BLAST of CK740078 vs. ExPASy Swiss-Prot
Match: L18A_LUPLU (Protein LlR18A OS=Lupinus luteus GN=LLR18A PE=1 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 3.799e-14
Identity = 43/131 (32.82%), Postives = 71/131 (54.20%), Query Frame = 3
Query:   51 MGVTRFEREYPAAVGASRMFKAFV-DSPNLLPKATPQAFKSIEVLEGDGGVGTVTLWTFPDGGHYKQVKQRIDALDNDNFTCKYTMYDGDGILAVAEKGVYDVKIEASGNGGCVYKFAAEVYVKDGEELKE 440
            MG+  FE E  + V  ++++KA   DS  ++PK   +  +S+E++EG+GG GT+        GH   V  ++DA+D  N T  Y++  G+G+    EK  Y+ KI    +GG + K   + + K G+ L E
Sbjct:    1 MGIFAFENEQSSTVAPAKLYKALTKDSDEIVPKVI-EPIQSVEIVEGNGGPGTIKKIIAIHDGHTSFVLHKLDAIDEANLTYNYSIIGGEGLDESLEKISYESKILPGPDGGSIGKINVKFHTK-GDVLSE 129          

HSP 2 Score: 24.6386 bits (52), Expect = 3.799e-14
Identity = 8/15 (53.33%), Postives = 13/15 (86.67%), Query Frame = 2
Query:  473 GLYKVLEAYLVANPD 517
            GL+K +E Y++A+PD
Sbjct:  141 GLFKAIEGYVLAHPD 155          
BLAST of CK740078 vs. ExPASy Swiss-Prot
Match: PR1_ASPOF (Pathogenesis-related protein 1 OS=Asparagus officinalis GN=PR1 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.316e-11
Identity = 45/144 (31.25%), Postives = 65/144 (45.14%), Query Frame = 3
Query:   66 FEREYPAAVGASRMFKA-FVDSPNLLPKATPQAFKSIEVLEGDGGVGTVTLWTFPDGG-HYKQVKQRIDALDNDNFTCKYTMYDGDGILAVAEKGVYDVKIEASGNGGCVYKFAAEVYVKDGEELKEEHVKDAEREERDCTRSW 491
            +  E    V A RMFKA  +D  NL PK  P       V+ GDG VGT+      +    +  VK+R+D +D+D F  K T+ +G G+  + E      K E S NGGC+ K  A   +  G   +    K+        T ++
Sbjct:    6 WSHEVAVNVAAGRMFKAAMLDWHNLGPKIVPDFIAGGSVVSGDGSVGTIREIKINNPAIPFSYVKERLDFVDHDKFEVKQTLVEGGGLGKMFECATTHFKFEPSSNGGCLVKVTASYKILPGVADESAKAKEGITNHMKATEAY 149          
The following BLAST results are available for this feature:
BLAST of CK740078 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 44
Match NameE-valueIdentityDescription
PR2_PHAVU7.888e-1532.59Pathogenesis-related protein 2 OS=Phaseolus vulgar... [more]
ABR17_PEA2.923e-1430.15ABA-responsive protein ABR17 OS=Pisum sativum PE=2... [more]
L18A_LUPLU3.799e-1432.82Protein LlR18A OS=Lupinus luteus GN=LLR18A PE=1 SV... [more]
PR1_ASPOF1.316e-1131.25Pathogenesis-related protein 1 OS=Asparagus offici... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_6572 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE65B08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK740078 ID=CK740078; Name=CK740078; organism=Citrus sinensis; type=EST; length=613bp
GCAAAAATATATCCATTTCTTTCTCTTTAAGCTAATAAATTATTATCAAC
ATGGGTGTCACTCGCTTTGAGAGAGAGTATCCGGCTGCTGTTGGTGCATC
AAGAATGTTCAAGGCTTTTGTTGACTCTCCCAATTTGTTGCCGAAGGCCA
CACCGCAAGCATTCAAGAGCATCGAGGTTCTCGAAGGAGATGGAGGCGTT
GGCACTGTCACGCTGTGGACCTTTCCTGATGGTGGTCATTACAAGCAAGT
GAAGCAAAGAATCGACGCACTTGACAATGACAATTTCACATGCAAGTACA
CCATGTACGACGGAGATGGGATCTTGGCAGTTGCAGAGAAAGGGGTGTAC
GATGTTAAGATCGAGGCTTCTGGCAATGGGGGATGCGTTTACAAGTTTGC
CGCGGAGGTCTACGTGAAGGATGGTGAAGAGCTCAAAGAAGAGCACGTCA
AGGACGCCGAAAGAGAGGAACGGGATTGTACAAGGTCCTGGAAGCCTATC
TAGTGGCTAACCCTGATCTCTACGCCTAAATTAATTAATCAATCATCACC
ATGCTTTGGCTTTTCCAGTTTCGATCGTCTGCTGCTTGCTATTTGAATAA
GTTTCGGTGACAT
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