CK740096
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK740096 vs. ExPASy Swiss-Prot
Match: RS3A_DAUCA (40S ribosomal protein S3a OS=Daucus carota GN=cyc07 PE=2 SV=1) HSP 1 Score: 209.149 bits (531), Expect = 9.175e-54 Identity = 101/125 (80.80%), Postives = 113/125 (90.40%), Query Frame = 3 Query: 132 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKR 506 DWYDIKAP+ F+ +NVGKTLV+RTQGTKIASEGLKHRVFEV L DL +E+ AYRKIRLRAEDVQGKNVLTNF+GM FTTDKLRSLVRKW TLIEA+VDVKTTD++TLR+FCIGFTK+ NQ KR Sbjct: 28 DWYDIKAPNVFQNKNVGKTLVSRTQGTKIASEGLKHRVFEVCLADLQGDEDQAYRKIRLRAEDVQGKNVLTNFYGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDSYTLRMFCIGFTKKRANQQKR 152
BLAST of CK740096 vs. ExPASy Swiss-Prot
Match: RS3A_CHLRE (40S ribosomal protein S3a OS=Chlamydomonas reinhardtii GN=CHLREDRAFT_168484 PE=3 SV=1) HSP 1 Score: 201.06 bits (510), Expect = 2.499e-51 Identity = 97/125 (77.60%), Postives = 107/125 (85.60%), Query Frame = 3 Query: 132 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKR 506 DWYDIKAP+ F VRNVGKTLVTRTQGTKIASE LK RVFEVSL DL E+ A+RK+RLR EDVQG+N LTNFWGM FTTDKLRSLVRKW TLIEA+VDVKTTD +TLR+FCI FTK+ Q+KR Sbjct: 28 DWYDIKAPTMFTVRNVGKTLVTRTQGTKIASEALKGRVFEVSLADLQKNEDDAFRKMRLRVEDVQGRNCLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDGYTLRVFCISFTKKRQGQIKR 152
BLAST of CK740096 vs. ExPASy Swiss-Prot
Match: RS3A_OSTLU (40S ribosomal protein S3a OS=Ostreococcus lucimarinus (strain CCE9901) GN=OSTLU_28528 PE=3 SV=1) HSP 1 Score: 196.438 bits (498), Expect = 6.154e-50 Identity = 92/125 (73.60%), Postives = 110/125 (88.00%), Query Frame = 3 Query: 132 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKR 506 DWYDIKAPS F VRN+GKTLV+RTQGTKIAS+GLK R+FE+SL DL N+E+ ++RK++L+ EDVQGKNVLTNF GM FTTDK+RSLVRKW +LIE +VDVKTTD +TLR+FCIGFTKR +Q KR Sbjct: 28 DWYDIKAPSMFSVRNIGKTLVSRTQGTKIASDGLKGRIFEISLADLNNDEDQSFRKMKLKCEDVQGKNVLTNFAGMDFTTDKIRSLVRKWFSLIECFVDVKTTDGYTLRVFCIGFTKRRMDQAKR 152
BLAST of CK740096 vs. ExPASy Swiss-Prot
Match: RS3A_SUBDO (40S ribosomal protein S3a OS=Suberites domuncula PE=2 SV=1) HSP 1 Score: 192.586 bits (488), Expect = 8.887e-49 Identity = 93/125 (74.40%), Postives = 109/125 (87.20%), Query Frame = 3 Query: 132 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKR 506 DWYD+KAPS F VRN+GKTLVTRTQG K+AS+GLK RVFEVSL DL N+E+ ++RK RL +ED+QGKNVLTNF GM+ TTDKLR+LV+KW TLIEA VDVKTTD + LRLFCIGFTKR PNQ+K+ Sbjct: 28 DWYDVKAPSMFAVRNIGKTLVTRTQGKKLASDGLKGRVFEVSLADLQNDEQ-SFRKFRLISEDIQGKNVLTNFHGMTMTTDKLRALVKKWQTLIEANVDVKTTDGYLLRLFCIGFTKRQPNQIKK 151
BLAST of CK740096 vs. ExPASy Swiss-Prot
Match: RS3A_LENED (40S ribosomal protein S1 OS=Lentinula edodes GN=RPS1 PE=2 SV=1) HSP 1 Score: 184.496 bits (467), Expect = 2.420e-46 Identity = 90/125 (72.00%), Postives = 104/125 (83.20%), Query Frame = 3 Query: 132 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKR 506 DWYDIKAPS F VRNVGKTLV R+QG K A++ LK R+ EVSLGDL EEE ++RKI+LR ++VQGKN LTNF GM FT+DKLRSLVRKW TLIEA+VDVKTTD + LRLF IGFTKR P QV++ Sbjct: 28 DWYDIKAPSIFDVRNVGKTLVNRSQGLKNANDSLKGRIIEVSLGDLNKEEEQSFRKIKLRVDEVQGKNCLTNFHGMDFTSDKLRSLVRKWQTLIEAHVDVKTTDGYLLRLFAIGFTKRRPTQVRK 152
BLAST of CK740096 vs. ExPASy Swiss-Prot
Match: RS3A_IXOSC (40S ribosomal protein S3a OS=Ixodes scapularis PE=2 SV=1) HSP 1 Score: 182.57 bits (462), Expect = 9.196e-46 Identity = 89/125 (71.20%), Postives = 104/125 (83.20%), Query Frame = 3 Query: 132 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKR 506 DWYD+KAP+ + VRN+GKT V RTQGTKIASEGLK RVFEVS DL N E+ AYRK RL AE+VQG+NVLTNF GM TTDKLRS+V+KW TLIEA VDV+TTD + LR+FCIGFTK+ NQ+K+ Sbjct: 29 DWYDVKAPTMYTVRNIGKTFVNRTQGTKIASEGLKGRVFEVSQADLTNGED-AYRKFRLIAEEVQGRNVLTNFHGMDLTTDKLRSMVKKWQTLIEATVDVRTTDGYLLRMFCIGFTKKCANQLKK 152
BLAST of CK740096 vs. ExPASy Swiss-Prot
Match: RS3A_NEMVE (40S ribosomal protein S3a OS=Nematostella vectensis GN=v1g242621 PE=3 SV=1) HSP 1 Score: 181.415 bits (459), Expect = 2.049e-45 Identity = 88/125 (70.40%), Postives = 104/125 (83.20%), Query Frame = 3 Query: 132 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKR 506 DWYD+KAPS F +R +GKT+VTRT GTKIAS+GLK RVFEVSL DL N+E A+RK +L E+VQG+N LTNF GM+ TTDKLRSLV+KW TLIEA VDVKTTD + LR+FCIGFTKR NQ+K+ Sbjct: 28 DWYDVKAPSMFNIRQIGKTVVTRTAGTKIASDGLKGRVFEVSLADLQNDEI-AFRKFKLMCEEVQGRNCLTNFHGMNMTTDKLRSLVKKWQTLIEAAVDVKTTDGYLLRMFCIGFTKRRQNQIKK 151
BLAST of CK740096 vs. ExPASy Swiss-Prot
Match: RS3A_POSPM (40S ribosomal protein S1 OS=Postia placenta (strain ATCC 44394 / Madison 698-R) GN=RPS1 PE=3 SV=1) HSP 1 Score: 179.874 bits (455), Expect = 5.961e-45 Identity = 87/125 (69.60%), Postives = 103/125 (82.40%), Query Frame = 3 Query: 132 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKR 506 DWYDIKAPS F RNVGKTLV R+ G K A++ LK R+ E+SL DL N+EE A+RKI+LR ++VQGKN LTNF GMSF++DKLRSLVRKW TLIEA+VDVKTTD + LRLF IGFTKR P QV++ Sbjct: 28 DWYDIKAPSIFEKRNVGKTLVNRSSGLKNANDSLKGRIVEISLADLNNDEEQAFRKIKLRIDEVQGKNCLTNFHGMSFSSDKLRSLVRKWQTLIEAHVDVKTTDGYLLRLFAIGFTKRRPTQVRK 152
BLAST of CK740096 vs. ExPASy Swiss-Prot
Match: RS3A_TAEGU (40S ribosomal protein S3a OS=Taeniopygia guttata GN=RPS3A PE=2 SV=1) HSP 1 Score: 179.489 bits (454), Expect = 7.785e-45 Identity = 85/125 (68.00%), Postives = 104/125 (83.20%), Query Frame = 3 Query: 132 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKR 506 DWYD+KAP+ F +RN+GKTLVTRTQGTKIAS+GLK RVFEVSL DL N+E A+RK +L EDVQGKN LTNF GM T DK+ S+V+KW T+IEA+VDVKTTD + LRLFC+GFTK+ NQ+++ Sbjct: 29 DWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDEV-AFRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGFTKKRNNQIRK 152
BLAST of CK740096 vs. ExPASy Swiss-Prot
Match: RS3A_RAT (40S ribosomal protein S3a OS=Rattus norvegicus GN=Rps3a PE=1 SV=2) HSP 1 Score: 179.489 bits (454), Expect = 7.785e-45 Identity = 85/125 (68.00%), Postives = 104/125 (83.20%), Query Frame = 3 Query: 132 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKR 506 DWYD+KAP+ F +RN+GKTLVTRTQGTKIAS+GLK RVFEVSL DL N+E A+RK +L EDVQGKN LTNF GM T DK+ S+V+KW T+IEA+VDVKTTD + LRLFC+GFTK+ NQ+++ Sbjct: 29 DWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDEV-AFRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGFTKKRNNQIRK 152 The following BLAST results are available for this feature:
BLAST of CK740096 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 160
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Sequences
The
following sequences are available for this feature:
EST sequence >CK740096 ID=CK740096; Name=CK740096; organism=Citrus sinensis; type=EST; length=507bpback to top |