CK740096
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK740096 vs. ExPASy Swiss-Prot
Match: RS3A2_LEIIN (40S ribosomal protein S3a-2 OS=Leishmania infantum GN=LinJ35.0510 PE=3 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 2.431e-30 Identity = 64/127 (50.39%), Postives = 86/127 (67.72%), Query Frame = 3 Query: 132 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNE--EEHAYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKR 506 +WYD+ AP+ F R KT+ +TQGT+IA++ L+ RVFE +L DL EE AYRK+R ++VQG+N+LT F M TTDK+ SL+RKW T +E V+VKT D +T+RLF + FTK NQ R Sbjct: 29 EWYDVVAPANFEKRQFAKTICNKTQGTRIAADVLRGRVFEANLADLNQSAGEEEAYRKVRFTVQEVQGRNLLTQFHSMEVTTDKMASLLRKWCTTMETTVEVKTADGYTMRLFVVAFTKPQANQQSR 155
BLAST of CK740096 vs. ExPASy Swiss-Prot
Match: RS3A1_LEIIN (40S ribosomal protein S3a-1 OS=Leishmania infantum GN=LinJ35.0500 PE=3 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 2.431e-30 Identity = 64/127 (50.39%), Postives = 86/127 (67.72%), Query Frame = 3 Query: 132 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNE--EEHAYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKR 506 +WYD+ AP+ F R KT+ +TQGT+IA++ L+ RVFE +L DL EE AYRK+R ++VQG+N+LT F M TTDK+ SL+RKW T +E V+VKT D +T+RLF + FTK NQ R Sbjct: 29 EWYDVVAPANFEKRQFAKTICNKTQGTRIAADVLRGRVFEANLADLNQSAGEEEAYRKVRFTVQEVQGRNLLTQFHSMEVTTDKMASLLRKWCTTMETTVEVKTADGYTMRLFVVAFTKPQANQQSR 155
BLAST of CK740096 vs. ExPASy Swiss-Prot
Match: RS3A2_TRYCR (40S ribosomal protein S3a-2 OS=Trypanosoma cruzi GN=Tc00.1047053511001.9 PE=3 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 1.576e-29 Identity = 62/127 (48.82%), Postives = 88/127 (69.29%), Query Frame = 3 Query: 132 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDL--LNEEEHAYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKR 506 +WYD+ AP F VR GKT+ +TQGTKIA++ L+ RV+E +L DL ++ AYRK++ ++VQG+N+LT F M T+D++ L+RKW T IEA V+ KT D +TLRLF I FTK+ NQ+ + Sbjct: 28 EWYDVVAPKNFEVRQFGKTICNKTQGTKIAADYLRGRVYESNLADLNKTQGDDDAYRKVKFVVQEVQGRNLLTQFHSMEMTSDRVYFLLRKWCTTIEAAVEAKTADGYTLRLFVIAFTKKQSNQLSK 154
BLAST of CK740096 vs. ExPASy Swiss-Prot
Match: RS3A1_TRYCR (40S ribosomal protein S3a-1 OS=Trypanosoma cruzi GN=Tc00.1047053503635.59 PE=3 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 1.576e-29 Identity = 62/127 (48.82%), Postives = 88/127 (69.29%), Query Frame = 3 Query: 132 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDL--LNEEEHAYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKR 506 +WYD+ AP F VR GKT+ +TQGTKIA++ L+ RV+E +L DL ++ AYRK++ ++VQG+N+LT F M T+D++ L+RKW T IEA V+ KT D +TLRLF I FTK+ NQ+ + Sbjct: 28 EWYDVVAPKNFEVRQFGKTICNKTQGTKIAADYLRGRVYESNLADLNKTQGDDDAYRKVKFVVQEVQGRNLLTQFHSMEMTSDRVYFLLRKWCTTIEAAVETKTADGYTLRLFVIAFTKKQSNQLSK 154
BLAST of CK740096 vs. ExPASy Swiss-Prot
Match: RS3A_TETTH (40S ribosomal protein S3a OS=Tetrahymena thermophila GN=TTHERM_00047480 PE=3 SV=2) HSP 1 Score: 121.709 bits (304), Expect = 1.926e-27 Identity = 57/119 (47.90%), Postives = 84/119 (70.59%), Query Frame = 3 Query: 132 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLL-NEEEHAYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKR 485 +WYD +AP F ++ GKTLVT++ G +IASE +K RV E +L DL N + A+RK++L ++V G+N T+F+G+ T D+L S++RKW TLIEA VD KT D + +R+F + FTK+ Sbjct: 30 EWYDFRAPIPFSSKSFGKTLVTKSSGNRIASEEIKGRVVESTLADLKDNSNDKAWRKVKLVIDEVDGRNAKTSFYGLDITRDRLCSMIRKWQTLIEARVDCKTNDGYIIRVFTLAFTKK 148
BLAST of CK740096 vs. ExPASy Swiss-Prot
Match: RS3A_GIALA (40S ribosomal protein S3a OS=Giardia lamblia GN=GL50803_16265 PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 6.636e-20 Identity = 51/127 (40.16%), Postives = 78/127 (61.42%), Query Frame = 3 Query: 132 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLL--NEEEHAYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKR 506 +WY + AP+ F+ R++G+T VT+T G ++A++ + HRV+EV+LGDL E+ + K L+ + V LTNF GM T K SL RK I+ ++D+ TTD + LR+F I FT R Q ++ Sbjct: 26 EWYPVIAPAHFKSRHIGQTPVTKTAGLRVATDVINHRVYEVNLGDLNPGAEDLNGNTKFYLQTQLVSDGKCLTNFHGMDITRHKYGSLFRKGCDCIDVFMDIPTTDGYLLRVFVIAFTDRFRFQRRK 152
BLAST of CK740096 vs. ExPASy Swiss-Prot
Match: RS3A_NOSCE (40S ribosomal protein S1 OS=Nosema ceranae (strain BRL01) GN=RPS1 PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 9.583e-19 Identity = 50/121 (41.32%), Postives = 74/121 (61.16%), Query Frame = 3 Query: 132 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLL-NEEEHAYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLP 491 +WY++KAP+ F GKT+VT++ + + L R F+++ DL N EEHA RK R +V+GK+ + F GM T+DK++ ++RKWHTLIEA D+ D LR+F TK+ P Sbjct: 30 EWYNLKAPAIFPNNVCGKTMVTKSSNKQNLALLLIGRKFDINQADLTGNLEEHA-RKFSFRVNEVRGKDCIGVFDGMHMTSDKVKGIIRKWHTLIEAEKDIVAKDGTILRVFVNAVTKKTP 149
BLAST of CK740096 vs. ExPASy Swiss-Prot
Match: RS3A_GUITH (40S ribosomal protein S3a OS=Guillardia theta PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 1.432e-14 Identity = 39/117 (33.33%), Postives = 67/117 (57.26%), Query Frame = 3 Query: 144 IKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPN 494 + AP F + +GKTL+ + + + +++++VSL D+L +EE + ++ + T F G++ T DK+ SL++KWHTLIE V+ KT D + L+LF I +K+ N Sbjct: 29 VYAPDIFDSKLIGKTLIKKRNPAD-ENSSVDNKIYQVSLADILGKEEFSSINFNFKSLKIFNNECFTKFHGLTLTRDKICSLIKKWHTLIEVEVNFKTKDGYFLKLFLIAQSKKPKN 144
BLAST of CK740096 vs. ExPASy Swiss-Prot
Match: RS3A_ENCCU (40S ribosomal protein S1 OS=Encephalitozoon cuniculi GN=RPS1 PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 6.652e-12 Identity = 32/89 (35.96%), Postives = 52/89 (58.43%), Query Frame = 3 Query: 240 RVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKR 506 R ++V+ DL + +RK + D++G + F GM T+DK +++++KWHTLIEA D+ D R+F +G T+R P VK+ Sbjct: 16 RRYDVNQADLTGNNDVGHRKFIFKIGDIKGSECVGFFDGMELTSDKHKAMIKKWHTLIEAQKDIVAKDGSVFRVFVMGVTRRHPGYVKK 104
BLAST of CK740096 vs. ExPASy Swiss-Prot
Match: RS3A_METTP (30S ribosomal protein S3Ae OS=Methanosaeta thermophila (strain DSM 6194 / PT) GN=rps3Ae PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 8.688e-12 Identity = 45/125 (36.00%), Postives = 61/125 (48.80%), Query Frame = 3 Query: 135 WYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRL--FCIGFTKRLPNQVK 503 WY + AP F VG+TL L RV E +LGDL N K+R + + V G T F G TTD +RSLV++ + I+A VDV T+D + +R+ C + NQVK Sbjct: 17 WYKVLAPEMFGRTPVGETLANDPNK-------LLGRVIETTLGDLTNNFSKQNTKLRFKIDAVAGDTAYTKFIGHEMTTDYIRSLVKRRTSRIDAVVDVTTSDGYLVRVKPSCFTVKRARANQVK 134 The following BLAST results are available for this feature:
BLAST of CK740096 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 160
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CK740096 ID=CK740096; Name=CK740096; organism=Citrus sinensis; type=EST; length=507bpback to top |