CK740096
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK740096 vs. ExPASy Swiss-Prot
Match: RS3A1_YEAST (40S ribosomal protein S1-A OS=Saccharomyces cerevisiae GN=RPS1A PE=1 SV=2) HSP 1 Score: 166.392 bits (420), Expect = 6.820e-41 Identity = 80/125 (64.00%), Postives = 99/125 (79.20%), Query Frame = 3 Query: 132 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKR 506 +W+DIKAPS F RNVGKTLV ++ G K AS+ LK RV EV L DL E+H++RKI+LR ++VQGKN+LTNF GM FTTDKLRS+VRKW TLIEA V VKT+D++ LR+F I FT++ NQVKR Sbjct: 28 EWFDIKAPSTFENRNVGKTLVNKSTGLKSASDALKGRVVEVCLADLQGSEDHSFRKIKLRVDEVQGKNLLTNFHGMDFTTDKLRSMVRKWQTLIEANVTVKTSDDYVLRIFAIAFTRKQANQVKR 152
BLAST of CK740096 vs. ExPASy Swiss-Prot
Match: RS3A1_YEAS7 (40S ribosomal protein S1-A OS=Saccharomyces cerevisiae (strain YJM789) GN=RPS1A PE=3 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 6.820e-41 Identity = 80/125 (64.00%), Postives = 99/125 (79.20%), Query Frame = 3 Query: 132 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKR 506 +W+DIKAPS F RNVGKTLV ++ G K AS+ LK RV EV L DL E+H++RKI+LR ++VQGKN+LTNF GM FTTDKLRS+VRKW TLIEA V VKT+D++ LR+F I FT++ NQVKR Sbjct: 28 EWFDIKAPSTFENRNVGKTLVNKSTGLKSASDALKGRVVEVCLADLQGSEDHSFRKIKLRVDEVQGKNLLTNFHGMDFTTDKLRSMVRKWQTLIEANVTVKTSDDYVLRIFAIAFTRKQANQVKR 152
BLAST of CK740096 vs. ExPASy Swiss-Prot
Match: RS3A1_YEAS6 (40S ribosomal protein S1-A OS=Saccharomyces cerevisiae (strain AWRI1631) GN=RPS1A PE=3 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 6.820e-41 Identity = 80/125 (64.00%), Postives = 99/125 (79.20%), Query Frame = 3 Query: 132 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKR 506 +W+DIKAPS F RNVGKTLV ++ G K AS+ LK RV EV L DL E+H++RKI+LR ++VQGKN+LTNF GM FTTDKLRS+VRKW TLIEA V VKT+D++ LR+F I FT++ NQVKR Sbjct: 28 EWFDIKAPSTFENRNVGKTLVNKSTGLKSASDALKGRVVEVCLADLQGSEDHSFRKIKLRVDEVQGKNLLTNFHGMDFTTDKLRSMVRKWQTLIEANVTVKTSDDYVLRIFAIAFTRKQANQVKR 152
BLAST of CK740096 vs. ExPASy Swiss-Prot
Match: RS3A1_YEAS2 (40S ribosomal protein S1-A OS=Saccharomyces cerevisiae (strain JAY291) GN=RPS1A PE=3 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 6.820e-41 Identity = 80/125 (64.00%), Postives = 99/125 (79.20%), Query Frame = 3 Query: 132 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKR 506 +W+DIKAPS F RNVGKTLV ++ G K AS+ LK RV EV L DL E+H++RKI+LR ++VQGKN+LTNF GM FTTDKLRS+VRKW TLIEA V VKT+D++ LR+F I FT++ NQVKR Sbjct: 28 EWFDIKAPSTFENRNVGKTLVNKSTGLKSASDALKGRVVEVCLADLQGSEDHSFRKIKLRVDEVQGKNLLTNFHGMDFTTDKLRSMVRKWQTLIEANVTVKTSDDYVLRIFAIAFTRKQANQVKR 152
BLAST of CK740096 vs. ExPASy Swiss-Prot
Match: RS3A1_YEAS1 (40S ribosomal protein S1-A OS=Saccharomyces cerevisiae (strain RM11-1a) GN=RPS1A PE=3 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 6.820e-41 Identity = 80/125 (64.00%), Postives = 99/125 (79.20%), Query Frame = 3 Query: 132 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKR 506 +W+DIKAPS F RNVGKTLV ++ G K AS+ LK RV EV L DL E+H++RKI+LR ++VQGKN+LTNF GM FTTDKLRS+VRKW TLIEA V VKT+D++ LR+F I FT++ NQVKR Sbjct: 28 EWFDIKAPSTFENRNVGKTLVNKSTGLKSASDALKGRVVEVCLADLQGSEDHSFRKIKLRVDEVQGKNLLTNFHGMDFTTDKLRSMVRKWQTLIEANVTVKTSDDYVLRIFAIAFTRKQANQVKR 152
BLAST of CK740096 vs. ExPASy Swiss-Prot
Match: RS3A1_PICST (40S ribosomal protein S1-A OS=Pichia stipitis GN=RPS1A PE=3 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 6.820e-41 Identity = 77/125 (61.60%), Postives = 100/125 (80.00%), Query Frame = 3 Query: 132 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKR 506 DW+DIKAPS F RNVGKTL+ R+ G K A++GLK R+ EV+L DL E+H+YR ++LR ++VQGKN+LTNF G+SFT+DKLRSLVRKW +L+EA V VKT D++ LR+F + FTKR NQVK+ Sbjct: 28 DWFDIKAPSTFENRNVGKTLINRSTGMKNAADGLKGRIVEVNLADLQGSEDHSYRNVKLRVDEVQGKNLLTNFHGLSFTSDKLRSLVRKWQSLVEANVTVKTADDYVLRVFALAFTKRQANQVKK 152
BLAST of CK740096 vs. ExPASy Swiss-Prot
Match: RS3A_LYSTE (40S ribosomal protein S3a OS=Lysiphlebus testaceipes PE=2 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 8.907e-41 Identity = 83/120 (69.17%), Postives = 96/120 (80.00%), Query Frame = 3 Query: 132 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEE--EHAYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKR 485 DWYDIKAPS F R VGKTLV RTQGTKIASEGLK RV EVSL DL ++ E ++RK RL EDVQ ++VL NF GM TTDKLRS+V+KW TLIEA+VDVKTTD + LR+FCIGFT++ Sbjct: 29 DWYDIKAPSMFTTRQVGKTLVNRTQGTKIASEGLKGRVVEVSLADLQSDADAERSFRKFRLIVEDVQNRSVLCNFHGMDLTTDKLRSMVKKWQTLIEAHVDVKTTDGYLLRIFCIGFTQK 148
BLAST of CK740096 vs. ExPASy Swiss-Prot
Match: RS3A_NANOT (40S ribosomal protein S1 OS=Nannizzia otae (strain CBS 113480) GN=RPS1 PE=3 SV=1) HSP 1 Score: 165.622 bits (418), Expect = 1.163e-40 Identity = 81/125 (64.80%), Postives = 101/125 (80.80%), Query Frame = 3 Query: 132 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKR 506 D Y +KAP+ F+VR+VGKTLV RT G K A++ LK RVFEVSL DL +E H++RK++LR ++VQGKN LTNF G+ FT+DKLRSLVRKW TLIEA V VKTTD++ +RLF I FTKR PNQ+K+ Sbjct: 28 DEYLVKAPTTFQVRDVGKTLVNRTTGLKNANDYLKGRVFEVSLADLQKDEAHSFRKVKLRVDEVQGKNCLTNFHGLDFTSDKLRSLVRKWQTLIEANVTVKTTDDYLVRLFAIAFTKRRPNQIKK 152
BLAST of CK740096 vs. ExPASy Swiss-Prot
Match: RS3A_BOMMA (40S ribosomal protein S3a OS=Bombyx mandarina PE=2 SV=1) HSP 1 Score: 165.622 bits (418), Expect = 1.163e-40 Identity = 83/120 (69.17%), Postives = 94/120 (78.33%), Query Frame = 3 Query: 132 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLL--NEEEHAYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKR 485 DWYD+KAPS F R VG TLV RTQGTKIASEGLK RVFEVSL DL + E ++RK RL AEDVQG+NVL NF GM TTDKLR +V+KW TLIEA +DVKTTD + LR+FCIGFT + Sbjct: 29 DWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEDVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNK 148
BLAST of CK740096 vs. ExPASy Swiss-Prot
Match: RS3A2_YEAST (40S ribosomal protein S1-B OS=Saccharomyces cerevisiae GN=RPS1B PE=1 SV=3) HSP 1 Score: 165.622 bits (418), Expect = 1.163e-40 Identity = 79/125 (63.20%), Postives = 99/125 (79.20%), Query Frame = 3 Query: 132 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKR 506 +W+DIKAPS F RNVGKTLV ++ G K AS+ LK RV EV L DL E+H++RK++LR ++VQGKN+LTNF GM FTTDKLRS+VRKW TLIEA V VKT+D++ LR+F I FT++ NQVKR Sbjct: 28 EWFDIKAPSTFENRNVGKTLVNKSTGLKNASDALKGRVVEVCLADLQGSEDHSFRKVKLRVDEVQGKNLLTNFHGMDFTTDKLRSMVRKWQTLIEANVTVKTSDDYVLRIFAIAFTRKQANQVKR 152 The following BLAST results are available for this feature:
BLAST of CK740096 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 160
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Sequences
The
following sequences are available for this feature:
EST sequence >CK740096 ID=CK740096; Name=CK740096; organism=Citrus sinensis; type=EST; length=507bpback to top |