CK740102

Overview
NameCK740102
Unique NameCK740102
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length521
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK740102 vs. ExPASy Swiss-Prot
Match: CATB_BOVIN (Cathepsin B OS=Bos taurus GN=CTSB PE=1 SV=5)

HSP 1 Score: 116.701 bits (291), Expect = 6.583e-26
Identity = 45/83 (54.22%), Postives = 66/83 (79.52%), Query Frame = 1
Query:    1 VEVSFTVYEDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSNECGIEEDVVAGLP 249
            VE +F+VY DF  YKSGVY+H++G++MGGHA++++GWG  ++G  YW++ N WN  WG +G+FKI RG + CGIE ++VAG+P
Sbjct:  249 VEGAFSVYSDFLLYKSGVYQHVSGEIMGGHAIRILGWGV-ENGTPYWLVGNSWNTDWGDNGFFKILRGQDHCGIESEIVAGMP 330          
BLAST of CK740102 vs. ExPASy Swiss-Prot
Match: CATB3_GIALA (Cathepsin B-like CP3 OS=Giardia lamblia GN=CP3 PE=2 SV=2)

HSP 1 Score: 116.701 bits (291), Expect = 6.583e-26
Identity = 48/81 (59.26%), Postives = 61/81 (75.31%), Query Frame = 1
Query:    1 VEVSFTVYEDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSNECGIEEDVVAG 243
            ++ +FTVY DF +Y+SGVY+H  G V GGHAV ++G+GT DDG DYWI+ N W   WG DGYF+I R +NECGIEE V+ G
Sbjct:  215 LQTAFTVYSDFMYYESGVYQHTYGRVEGGHAVDMVGYGTDDDGVDYWIIKNSWGPDWGEDGYFRIIRMTNECGIEEQVIGG 295          
BLAST of CK740102 vs. ExPASy Swiss-Prot
Match: CPR3_CAEEL (Cathepsin B-like cysteine proteinase 3 OS=Caenorhabditis elegans GN=cpr-3 PE=2 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 1.123e-25
Identity = 54/100 (54.00%), Postives = 73/100 (73.00%), Query Frame = 1
Query:    1 VEVSFTVYEDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSNECGIEEDVVAGLPSSKNLVKEITSADMFED 300
            VE S+ VYEDF HYKSGVY + +G ++GGHAVK+IGWG  ++G DYW++AN W  S+G  G+FKI+RG+NEC IE +VVAG      + K  T ++ +ED
Sbjct:  255 VEASYKVYEDFYHYKSGVYHYTSGKLVGGHAVKIIGWGV-ENGVDYWLIANSWGTSFGEKGFFKIRRGTNECQIEGNVVAG------IAKLGTHSETYED 347          
BLAST of CK740102 vs. ExPASy Swiss-Prot
Match: CPR6_CAEEL (Cathepsin B-like cysteine proteinase 6 OS=Caenorhabditis elegans GN=cpr-6 PE=1 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 1.467e-25
Identity = 51/92 (55.43%), Postives = 63/92 (68.48%), Query Frame = 1
Query:    1 VEVSFTVYEDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSNECGIEEDVVAGLPSSKNLVKEI 276
            +E++F VYEDF +Y  GVY H  G + GGHAVKLIGWG  DDG  YW +AN WN  WG DG+F+I RG +ECGIE  VV G+P   +L   +
Sbjct:  276 LEIAFEVYEDFLNYDGGVYVHTGGKLGGGHAVKLIGWGI-DDGIPYWTVANSWNTDWGEDGFFRILRGVDECGIESGVVGGIPKLNSLTSRL 366          
BLAST of CK740102 vs. ExPASy Swiss-Prot
Match: CYSP1_HAECO (Cathepsin B-like cysteine proteinase 1 OS=Haemonchus contortus GN=AC-1 PE=2 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 1.915e-25
Identity = 47/88 (53.41%), Postives = 66/88 (75.00%), Query Frame = 1
Query:    1 VEVSFTVYEDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSNECGIEEDVVAGLPSSKNL 264
            V  SF VYEDF HYKSG+YKH  G++ G HAVK+IGWG +++  D+W++AN W+  WG  GYF+I RG+N+CGIE  + AG+  +++L
Sbjct:  256 VVASFAVYEDFRHYKSGIYKHTAGELRGYHAVKMIGWG-NENNTDFWLIANSWHNDWGEKGYFRIIRGTNDCGIEGTIAAGIVDTESL 342          
BLAST of CK740102 vs. ExPASy Swiss-Prot
Match: CPR1_CAEEL (Gut-specific cysteine proteinase OS=Caenorhabditis elegans GN=cpr-1 PE=1 SV=2)

HSP 1 Score: 114.775 bits (286), Expect = 2.502e-25
Identity = 49/81 (60.49%), Postives = 61/81 (75.31%), Query Frame = 1
Query:    1 VEVSFTVYEDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSNECGIEEDVVAG 243
            VE +F+VYEDF  YKSGVYKH  G  +GGHA+K+IGWGT + G  YW++AN W  +WG  G+FKI RG ++CGIE  VVAG
Sbjct:  246 VEAAFSVYEDFYKYKSGVYKHTAGKYLGGHAIKIIGWGT-ESGSPYWLVANSWGVNWGESGFFKIYRGDDQCGIESAVVAG 325          
BLAST of CK740102 vs. ExPASy Swiss-Prot
Match: CATB_CHICK (Cathepsin B OS=Gallus gallus GN=CTSB PE=2 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 2.502e-25
Identity = 46/83 (55.42%), Postives = 64/83 (77.11%), Query Frame = 1
Query:    1 VEVSFTVYEDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSNECGIEEDVVAGLP 249
            VE +F VYEDF  YKSGVY+H++G+ +GGHA++++GWG  ++G  YW+ AN WN  WG  G+FKI RG + CGIE ++VAG+P
Sbjct:  250 VEGAFIVYEDFLMYKSGVYQHVSGEQVGGHAIRILGWGV-ENGTPYWLAANSWNTDWGITGFFKILRGEDHCGIESEIVAGVP 331          
BLAST of CK740102 vs. ExPASy Swiss-Prot
Match: CYSP_SCHJA (Cathepsin B-like cysteine proteinase OS=Schistosoma japonicum GN=CATB PE=2 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 4.267e-25
Identity = 46/82 (56.10%), Postives = 62/82 (75.61%), Query Frame = 1
Query:    1 VEVSFTVYEDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSNECGIEEDVVAGL 246
            VE +F VYEDF +YKSG+Y+H+TG ++GGHA+++IGWG  +    YW++AN WN  WG  G F++ RG +EC IE DVVAGL
Sbjct:  259 VEAAFDVYEDFLNYKSGIYRHVTGSIVGGHAIRIIGWGV-EKRTPYWLIANSWNEDWGEKGLFRMVRGRDECSIESDVVAGL 339          
BLAST of CK740102 vs. ExPASy Swiss-Prot
Match: CATB2_GIALA (Cathepsin B-like CP2 OS=Giardia lamblia GN=CP2 PE=1 SV=2)

HSP 1 Score: 109.383 bits (272), Expect = 1.051e-23
Identity = 44/81 (54.32%), Postives = 60/81 (74.07%), Query Frame = 1
Query:    1 VEVSFTVYEDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSNECGIEEDVVAG 243
            ++V+F V+ DF +Y+SGVY+H  G + GGHAV+++G+GT DDG DYWI+ N W   WG DGYF++ RG N+C IEE   AG
Sbjct:  216 LQVAFLVHSDFMYYESGVYQHTYGYMEGGHAVEMVGYGTDDDGVDYWIIKNSWGPDWGEDGYFRMIRGINDCSIEEQAYAG 296          
BLAST of CK740102 vs. ExPASy Swiss-Prot
Match: CYSP1_OSTOS (Cathepsin B-like cysteine proteinase 1 OS=Ostertagia ostertagi GN=CP-1 PE=3 SV=3)

HSP 1 Score: 108.227 bits (269), Expect = 2.341e-23
Identity = 46/81 (56.79%), Postives = 60/81 (74.07%), Query Frame = 1
Query:    1 VEVSFTVYEDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSNECGIEEDVVAG 243
            V  ++TVYEDFAHY+SG+YKH  G   G HAVK+IGWG  + G  YWI+AN W+  WG +G+F++ RGSN+CG EE + AG
Sbjct:  259 VVATYTVYEDFAHYRSGIYKHKAGRKTGLHAVKVIGWG-EEKGTPYWIVANSWHDDWGENGFFRMHRGSNDCGFEERMAAG 338          
The following BLAST results are available for this feature:
BLAST of CK740102 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 47
Match NameE-valueIdentityDescription
CATB_BOVIN6.583e-2654.22Cathepsin B OS=Bos taurus GN=CTSB PE=1 SV=5[more]
CATB3_GIALA6.583e-2659.26Cathepsin B-like CP3 OS=Giardia lamblia GN=CP3 PE=... [more]
CPR3_CAEEL1.123e-2554.00Cathepsin B-like cysteine proteinase 3 OS=Caenorha... [more]
CPR6_CAEEL1.467e-2555.43Cathepsin B-like cysteine proteinase 6 OS=Caenorha... [more]
CYSP1_HAECO1.915e-2553.41Cathepsin B-like cysteine proteinase 1 OS=Haemonch... [more]
CPR1_CAEEL2.502e-2560.49Gut-specific cysteine proteinase OS=Caenorhabditis... [more]
CATB_CHICK2.502e-2555.42Cathepsin B OS=Gallus gallus GN=CTSB PE=2 SV=1[more]
CYSP_SCHJA4.267e-2556.10Cathepsin B-like cysteine proteinase OS=Schistosom... [more]
CATB2_GIALA1.051e-2354.32Cathepsin B-like CP2 OS=Giardia lamblia GN=CP2 PE=... [more]
CYSP1_OSTOS2.341e-2356.79Cathepsin B-like cysteine proteinase 1 OS=Ostertag... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_6596 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE65E01 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK740102 ID=CK740102; Name=CK740102; organism=Citrus sinensis; type=EST; length=521bp
GTTGAAGTTTCCTTCACAGTTTATGAGGATTTTGCTCACTACAAATCTGG
GGTCTACAAACACATCACAGGCGATGTAATGGGGGGTCATGCTGTTAAGC
TTATTGGTTGGGGAACTAGTGATGATGGCGAGGATTACTGGATTCTCGCT
AATCAGTGGAATAGAAGCTGGGGTGCGGATGGTTACTTCAAGATTAAAAG
AGGATCAAATGAGTGTGGTATTGAAGAGGATGTGGTTGCTGGTTTGCCTT
CATCCAAAAATCTTGTCAAAGAGATTACAAGTGCAGATATGTTTGAGGAT
GCTTCAGCTTGAGAGCAGACTTTGCTATACCTTCATGTTGTTATTTATAT
ATCAAATGTGTAGCTATAGGGGTGTATCGTTGAACCTAAGCTATCAAGGC
ATGAAATGGGAAGCTCCCGTCTTGCATAATTGAATGTATTAATGGAGTTT
AATGTTGTGTGTAAAAATAGAACCAGTTGTAATAACTTCGTTTCTCCTCG
CCGAATTATTCGTTTAGATGA
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