CK740102

Overview
NameCK740102
Unique NameCK740102
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length521
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK740102 vs. ExPASy Swiss-Prot
Match: CYSP3_OSTOS (Cathepsin B-like cysteine proteinase 3 (Fragment) OS=Ostertagia ostertagi GN=CP-3 PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 3.994e-23
Identity = 46/82 (56.10%), Postives = 58/82 (70.73%), Query Frame = 1
Query:    1 VEVSFTVYEDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSNECGIEEDVVAGL 246
            V   F VYEDFAHYKSG+YKH  G + GGHAVK+IGWG  + G  YW++AN W+  WG  G++++ RG N C IEE V AG+
Sbjct:   93 VVAGFIVYEDFAHYKSGIYKHTAGRMTGGHAVKIIGWG-KEKGTPYWLIANSWHDDWGEKGFYRMIRGINNCRIEEMVFAGI 173          
BLAST of CK740102 vs. ExPASy Swiss-Prot
Match: CTSB_DICDI (Cathepsin B OS=Dictyostelium discoideum GN=ctsB PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 5.767e-22
Identity = 51/83 (61.45%), Postives = 60/83 (72.29%), Query Frame = 1
Query:    1 VEVSFTVYEDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSNECGIEEDVVAGLP 249
            VE  FTV+EDF  YKSGVY H TG  +GGH VKL+G+GT  +G DY+   NQW  SWG +G F IKRG  +CGI +DVVAGLP
Sbjct:  232 VEACFTVFEDFLAYKSGVYVHTTGKDLGGHCVKLVGFGTL-NGVDYYAANNQWTTSWGDNGTFLIKRG--DCGISDDVVAGLP 311          
BLAST of CK740102 vs. ExPASy Swiss-Prot
Match: CATB1_GIALA (Cathepsin B-like CP1 OS=Giardia lamblia GN=CP1 PE=2 SV=3)

HSP 1 Score: 99.7525 bits (247), Expect = 8.328e-21
Identity = 40/81 (49.38%), Postives = 59/81 (72.84%), Query Frame = 1
Query:    1 VEVSFTVYEDFAHYKSGVYKHITGDV-MGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSNECGIEEDVVA 240
            ++    VY D ++Y+SGVYKH  G + +G HA++++G+GT+DDG DYWI+ N W   WG +GYF+I RG NEC IE+++ A
Sbjct:  219 LQTMIVVYADLSYYESGVYKHTYGTINLGFHALEIVGYGTTDDGTDYWIIKNSWGPDWGENGYFRIVRGVNECRIEDEIYA 299          
BLAST of CK740102 vs. ExPASy Swiss-Prot
Match: CATC_MACFA (Dipeptidyl-peptidase 1 OS=Macaca fascicularis GN=CTSC PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 7.794e-19
Identity = 46/92 (50.00%), Postives = 59/92 (64.13%), Query Frame = 1
Query:    7 VSFTVYEDFAHYKSGVYKHITG-------DVMGGHAVKLIGWGT-SDDGEDYWILANQWNRSWGADGYFKIKRGSNECGIEEDVVAGLPSSK 258
            V+F VY+DF HY++G+Y H TG         +  HAV L+G+GT S  G DYWI+ N W  SWG DGYF+I+RG++EC IE   VA  P  K
Sbjct:  372 VAFEVYDDFLHYQNGIYHH-TGLRDPFNPFELTNHAVLLVGYGTDSASGMDYWIVKNSWGTSWGEDGYFRIRRGTDECAIESIAVAATPIPK 462          
BLAST of CK740102 vs. ExPASy Swiss-Prot
Match: CATC_PONAB (Dipeptidyl-peptidase 1 OS=Pongo abelii GN=CTSC PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.018e-18
Identity = 46/92 (50.00%), Postives = 57/92 (61.96%), Query Frame = 1
Query:    7 VSFTVYEDFAHYKSGVYKHITG-------DVMGGHAVKLIGWGT-SDDGEDYWILANQWNRSWGADGYFKIKRGSNECGIEEDVVAGLPSSK 258
            V+F VY+DF HYK G+Y H TG         +  HAV L+G+GT S  G DYWI+ N W   WG DGYF+I+RG++EC IE   VA  P  K
Sbjct:  372 VAFEVYDDFLHYKKGIYHH-TGLRDPFNPFELTNHAVLLVGYGTDSASGMDYWIVKNSWGTGWGEDGYFRIRRGTDECAIESIAVAATPIPK 462          
BLAST of CK740102 vs. ExPASy Swiss-Prot
Match: CATC_HUMAN (Dipeptidyl-peptidase 1 OS=Homo sapiens GN=CTSC PE=1 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 3.868e-18
Identity = 45/92 (48.91%), Postives = 57/92 (61.96%), Query Frame = 1
Query:    7 VSFTVYEDFAHYKSGVYKHITG-------DVMGGHAVKLIGWGT-SDDGEDYWILANQWNRSWGADGYFKIKRGSNECGIEEDVVAGLPSSK 258
            V+F VY+DF HYK G+Y H TG         +  HAV L+G+GT S  G DYWI+ N W   WG +GYF+I+RG++EC IE   VA  P  K
Sbjct:  372 VAFEVYDDFLHYKKGIYHH-TGLRDPFNPFELTNHAVLLVGYGTDSASGMDYWIVKNSWGTGWGENGYFRIRRGTDECAIESIAVAATPIPK 462          
BLAST of CK740102 vs. ExPASy Swiss-Prot
Match: CATC_CANFA (Dipeptidyl-peptidase 1 (Fragment) OS=Canis familiaris GN=CTSC PE=1 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 6.598e-18
Identity = 45/92 (48.91%), Postives = 57/92 (61.96%), Query Frame = 1
Query:    7 VSFTVYEDFAHYKSGVYKHITG-------DVMGGHAVKLIGWGT-SDDGEDYWILANQWNRSWGADGYFKIKRGSNECGIEEDVVAGLPSSK 258
            V+F VY+DF HY+ G+Y H TG         +  HAV L+G+GT S  G DYWI+ N W   WG DGYF+I+RG++EC IE   VA  P  K
Sbjct:  344 VAFEVYDDFFHYQKGIYYH-TGLRDPFNPFELTNHAVLLVGYGTDSASGMDYWIVKNSWGSRWGEDGYFRIRRGTDECAIESIAVAATPIPK 434          
BLAST of CK740102 vs. ExPASy Swiss-Prot
Match: CATC_BOVIN (Dipeptidyl-peptidase 1 OS=Bos taurus GN=CTSC PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 1.470e-17
Identity = 44/92 (47.83%), Postives = 58/92 (63.04%), Query Frame = 1
Query:    7 VSFTVYEDFAHYKSGVYKHITG-------DVMGGHAVKLIGWGT-SDDGEDYWILANQWNRSWGADGYFKIKRGSNECGIEEDVVAGLPSSK 258
            V+F VY+DF HY+ GVY H TG         +  HAV L+G+GT +  G DYWI+ N W  SWG +GYF+I+RG++EC IE   +A  P  K
Sbjct:  372 VAFEVYDDFLHYRKGVYHH-TGLRDPFNPFELTNHAVLLVGYGTDAASGLDYWIVKNSWGTSWGENGYFRIRRGTDECAIESIALAATPIPK 462          
BLAST of CK740102 vs. ExPASy Swiss-Prot
Match: TINAG_HUMAN (Tubulointerstitial nephritis antigen OS=Homo sapiens GN=TINAG PE=2 SV=2)

HSP 1 Score: 84.3445 bits (207), Expect = 3.621e-16
Identity = 41/92 (44.57%), Postives = 54/92 (58.70%), Query Frame = 1
Query:    1 VEVSFTVYEDFAHYKSGVYKHITGD--------VMGGHAVKLIGWGT----SDDGEDYWILANQWNRSWGADGYFKIKRGSNECGIEEDVVA 240
            V+    V EDF HYK+G+Y+H+T           +  HAVKL GWGT        E +WI AN W +SWG +GYF+I RG NE  IE+ ++A
Sbjct:  374 VQAIMQVREDFFHYKTGIYRHVTSTNKESEKYRKLQTHAVKLTGWGTLRGAQGQKEKFWIAANSWGKSWGENGYFRILRGVNESDIEKLIIA 465          
BLAST of CK740102 vs. ExPASy Swiss-Prot
Match: CATC_MOUSE (Dipeptidyl-peptidase 1 OS=Mus musculus GN=Ctsc PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 4.729e-16
Identity = 41/92 (44.57%), Postives = 56/92 (60.87%), Query Frame = 1
Query:    7 VSFTVYEDFAHYKSGVYKHITG-------DVMGGHAVKLIGWGTSD-DGEDYWILANQWNRSWGADGYFKIKRGSNECGIEEDVVAGLPSSK 258
            V+F V++DF HY SG+Y H TG         +  HAV L+G+G     G +YWI+ N W  +WG  GYF+I+RG++EC IE   VA +P  K
Sbjct:  371 VAFEVHDDFLHYHSGIYHH-TGLSDPFNPFELTNHAVLLVGYGRDPVTGIEYWIIKNSWGSNWGESGYFRIRRGTDECAIESIAVAAIPIPK 461          
The following BLAST results are available for this feature:
BLAST of CK740102 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 47
Match NameE-valueIdentityDescription
CYSP3_OSTOS3.994e-2356.10Cathepsin B-like cysteine proteinase 3 (Fragment) ... [more]
CTSB_DICDI5.767e-2261.45Cathepsin B OS=Dictyostelium discoideum GN=ctsB PE... [more]
CATB1_GIALA8.328e-2149.38Cathepsin B-like CP1 OS=Giardia lamblia GN=CP1 PE=... [more]
CATC_MACFA7.794e-1950.00Dipeptidyl-peptidase 1 OS=Macaca fascicularis GN=C... [more]
CATC_PONAB1.018e-1850.00Dipeptidyl-peptidase 1 OS=Pongo abelii GN=CTSC PE=... [more]
CATC_HUMAN3.868e-1848.91Dipeptidyl-peptidase 1 OS=Homo sapiens GN=CTSC PE=... [more]
CATC_CANFA6.598e-1848.91Dipeptidyl-peptidase 1 (Fragment) OS=Canis familia... [more]
CATC_BOVIN1.470e-1747.83Dipeptidyl-peptidase 1 OS=Bos taurus GN=CTSC PE=2 ... [more]
TINAG_HUMAN3.621e-1644.57Tubulointerstitial nephritis antigen OS=Homo sapie... [more]
CATC_MOUSE4.729e-1644.57Dipeptidyl-peptidase 1 OS=Mus musculus GN=Ctsc PE=... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_6596 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE65E01 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK740102 ID=CK740102; Name=CK740102; organism=Citrus sinensis; type=EST; length=521bp
GTTGAAGTTTCCTTCACAGTTTATGAGGATTTTGCTCACTACAAATCTGG
GGTCTACAAACACATCACAGGCGATGTAATGGGGGGTCATGCTGTTAAGC
TTATTGGTTGGGGAACTAGTGATGATGGCGAGGATTACTGGATTCTCGCT
AATCAGTGGAATAGAAGCTGGGGTGCGGATGGTTACTTCAAGATTAAAAG
AGGATCAAATGAGTGTGGTATTGAAGAGGATGTGGTTGCTGGTTTGCCTT
CATCCAAAAATCTTGTCAAAGAGATTACAAGTGCAGATATGTTTGAGGAT
GCTTCAGCTTGAGAGCAGACTTTGCTATACCTTCATGTTGTTATTTATAT
ATCAAATGTGTAGCTATAGGGGTGTATCGTTGAACCTAAGCTATCAAGGC
ATGAAATGGGAAGCTCCCGTCTTGCATAATTGAATGTATTAATGGAGTTT
AATGTTGTGTGTAAAAATAGAACCAGTTGTAATAACTTCGTTTCTCCTCG
CCGAATTATTCGTTTAGATGA
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