CK740102

Overview
NameCK740102
Unique NameCK740102
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length521
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK740102 vs. ExPASy Swiss-Prot
Match: CATC_RAT (Dipeptidyl-peptidase 1 OS=Rattus norvegicus GN=Ctsc PE=1 SV=3)

HSP 1 Score: 83.5741 bits (205), Expect = 6.176e-16
Identity = 41/92 (44.57%), Postives = 55/92 (59.78%), Query Frame = 1
Query:    7 VSFTVYEDFAHYKSGVYKHITG-------DVMGGHAVKLIGWGTSD-DGEDYWILANQWNRSWGADGYFKIKRGSNECGIEEDVVAGLPSSK 258
            V+F V++DF HY SG+Y H TG         +  HAV L+G+G     G DYWI+ N W   WG  GYF+I+RG++EC IE   +A +P  K
Sbjct:  371 VAFEVHDDFLHYHSGIYHH-TGLSDPFNPFELTNHAVLLVGYGKDPVTGLDYWIVKNSWGSQWGESGYFRIRRGTDECAIESIAMAAIPIPK 461          
BLAST of CK740102 vs. ExPASy Swiss-Prot
Match: TINAG_BOVIN (Tubulointerstitial nephritis antigen OS=Bos taurus GN=TINAG PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 8.066e-16
Identity = 45/108 (41.67%), Postives = 60/108 (55.56%), Query Frame = 1
Query:    1 VEVSFTVYEDFAHYKSGVYKHITGDVMGG--------HAVKLIGWGT----SDDGEDYWILANQWNRSWGADGYFKIKRGSNECGIEEDVVAGLPSSKNLVKEITSAD 288
            V+    V+EDF +YK+G+Y+HIT              HAVKL GWGT        E +WI AN W +SWG +GYF+I RG NE  IE+ ++A          ++TSAD
Sbjct:  374 VQAIMQVHEDFFNYKTGIYRHITSTNEDSEKYRKFRTHAVKLTGWGTLRGAQGQKEKFWIAANSWGKSWGENGYFRILRGVNESDIEKLIIAAW-------GQLTSAD 474          
BLAST of CK740102 vs. ExPASy Swiss-Prot
Match: CATC_SCHMA (Cathepsin C OS=Schistosoma mansoni PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 1.987e-14
Identity = 37/83 (44.58%), Postives = 46/83 (55.42%), Query Frame = 1
Query:    7 VSFTVYEDFAHYKSGVYKHITGDV---------MGGHAVKLIGWGTSD-DGEDYWILANQWNRSWGADGYFKIKRGSNECGIE 225
            V F VYEDF  YK G+Y H T            +  HAV L+G+G     GE YW + N W   WG  GYF+I RG++ECG+E
Sbjct:  362 VGFEVYEDFQFYKEGIYHHTTVQTDHYNFNPFELTNHAVLLVGYGVDKLSGEPYWKVKNSWGVEWGEQGYFRILRGTDECGVE 444          
BLAST of CK740102 vs. ExPASy Swiss-Prot
Match: YCF2E_CAEEL (Uncharacterized peptidase C1-like protein F26E4.3 OS=Caenorhabditis elegans GN=F26E4.3 PE=1 SV=3)

HSP 1 Score: 76.6406 bits (187), Expect = 7.550e-14
Identity = 36/90 (40.00%), Postives = 48/90 (53.33%), Query Frame = 1
Query:    1 VEVSFTVYEDFAHYKSGVYKH--------ITGDVMGGHAVKLIGWGTSDDGED---YWILANQWNRSWGADGYFKIKRGSNECGIEEDVV 237
            V+ +F V+EDF  Y  GVY+H         +    G H+V+++GWG          YW+ AN W   WG DGYFK+ RG N C IE  V+
Sbjct:  337 VQATFVVHEDFFMYAGGVYQHSDLAAQKGASSVAEGYHSVRVLGWGVDHSTGKPIKYWLCANSWGTQWGEDGYFKVLRGENHCEIESFVI 426          
BLAST of CK740102 vs. ExPASy Swiss-Prot
Match: TINAL_HUMAN (Tubulointerstitial nephritis antigen-like OS=Homo sapiens GN=TINAGL1 PE=1 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 4.143e-12
Identity = 38/91 (41.76%), Postives = 48/91 (52.75%), Query Frame = 1
Query:    1 VEVSFTVYEDFAHYKSGVYKHITGDV--------MGGHAVKLIGWG--TSDDGED--YWILANQWNRSWGADGYFKIKRGSNECGIEEDVV 237
            V+    V+EDF  YK G+Y H    +         G H+VK+ GWG  T  DG    YW  AN W  +WG  G+F+I RG NEC IE  V+
Sbjct:  363 VQALMEVHEDFFLYKGGIYSHTPVSLGRPERYRRHGTHSVKITGWGEETLPDGRTLKYWTAANSWGPAWGERGHFRIVRGVNECDIESFVL 453          
BLAST of CK740102 vs. ExPASy Swiss-Prot
Match: CATH_RAT (Cathepsin H OS=Rattus norvegicus GN=Ctsh PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 5.410e-12
Identity = 37/78 (47.44%), Postives = 47/78 (60.26%), Query Frame = 1
Query:    1 VEVSFTVYEDFAHYKSGVYK----HITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSNECGI 222
            V  +F V EDF  YKSGVY     H T D +  HAV  +G+G   +G  YWI+ N W  +WG +GYF I+RG N CG+
Sbjct:  247 VSFAFEVTEDFMMYKSGVYSSNSCHKTPDKVN-HAVLAVGYG-EQNGLLYWIVKNSWGSNWGNNGYFLIERGKNMCGL 322          
BLAST of CK740102 vs. ExPASy Swiss-Prot
Match: CATH_MOUSE (Cathepsin H OS=Mus musculus GN=Ctsh PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 5.410e-12
Identity = 37/78 (47.44%), Postives = 46/78 (58.97%), Query Frame = 1
Query:    1 VEVSFTVYEDFAHYKSGVYK----HITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSNECGI 222
            V  +F V EDF  YKSGVY     H T D +  HAV  +G+G   +G  YWI+ N W   WG +GYF I+RG N CG+
Sbjct:  247 VSFAFEVTEDFLMYKSGVYSSKSCHKTPDKVN-HAVLAVGYG-EQNGLLYWIVKNSWGSQWGENGYFLIERGKNMCGL 322          
BLAST of CK740102 vs. ExPASy Swiss-Prot
Match: CYSP3_SOLLC (Cysteine proteinase 3 OS=Solanum lycopersicum GN=CYP-3 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 7.066e-12
Identity = 34/77 (44.16%), Postives = 45/77 (58.44%), Query Frame = 1
Query:    1 VEVSFTVYEDFAHYKSGVYKHIT-GDVMG--GHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSNECGI 222
            V V+F V + F  YKSGVY     GD      HAV  +G+G  ++G  YW++ N W   WG DGYFK++ G N CG+
Sbjct:  271 VSVAFEVVKGFKQYKSGVYASTECGDTPMDVNHAVLAVGYGV-ENGTPYWLIKNSWGADWGEDGYFKMEMGKNMCGV 346          
BLAST of CK740102 vs. ExPASy Swiss-Prot
Match: CYSP2_MAIZE (Cysteine proteinase 2 OS=Zea mays GN=CCP2 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.205e-11
Identity = 35/80 (43.75%), Postives = 45/80 (56.25%), Query Frame = 1
Query:    1 VEVSFTVYEDFAHYKSGVYKHITGDVMG------GHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSNECGI 222
            V V+F V   F  YKSGVY   T D  G       HAV  +G+G  +DG  YW++ N W   WG +GYFK++ G N CG+
Sbjct:  275 VSVAFEVITGFRLYKSGVY---TSDHCGTTPMDVNHAVLAVGYGV-EDGVPYWLIKNSWGADWGDEGYFKMEMGKNMCGV 350          
BLAST of CK740102 vs. ExPASy Swiss-Prot
Match: ALEU_ARATH (Thiol protease aleurain OS=Arabidopsis thaliana GN=ALEU PE=1 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 2.056e-11
Identity = 34/77 (44.16%), Postives = 43/77 (55.84%), Query Frame = 1
Query:    1 VEVSFTVYEDFAHYKSGVY--KHITGDVMG-GHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSNECGI 222
            V ++F V   F  YKSGVY   H     M   HAV  +G+G  +DG  YW++ N W   WG  GYFK++ G N CGI
Sbjct:  273 VSIAFEVIHSFRLYKSGVYTDSHCGSTPMDVNHAVLAVGYGV-EDGVPYWLIKNSWGADWGDKGYFKMEMGKNMCGI 348          
The following BLAST results are available for this feature:
BLAST of CK740102 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 47
Match NameE-valueIdentityDescription
CATC_RAT6.176e-1644.57Dipeptidyl-peptidase 1 OS=Rattus norvegicus GN=Cts... [more]
TINAG_BOVIN8.066e-1641.67Tubulointerstitial nephritis antigen OS=Bos taurus... [more]
CATC_SCHMA1.987e-1444.58Cathepsin C OS=Schistosoma mansoni PE=2 SV=1[more]
YCF2E_CAEEL7.550e-1440.00Uncharacterized peptidase C1-like protein F26E4.3 ... [more]
TINAL_HUMAN4.143e-1241.76Tubulointerstitial nephritis antigen-like OS=Homo ... [more]
CATH_RAT5.410e-1247.44Cathepsin H OS=Rattus norvegicus GN=Ctsh PE=1 SV=1[more]
CATH_MOUSE5.410e-1247.44Cathepsin H OS=Mus musculus GN=Ctsh PE=2 SV=1[more]
CYSP3_SOLLC7.066e-1244.16Cysteine proteinase 3 OS=Solanum lycopersicum GN=C... [more]
CYSP2_MAIZE1.205e-1143.75Cysteine proteinase 2 OS=Zea mays GN=CCP2 PE=2 SV=... [more]
ALEU_ARATH2.056e-1144.16Thiol protease aleurain OS=Arabidopsis thaliana GN... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_6596 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE65E01 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK740102 ID=CK740102; Name=CK740102; organism=Citrus sinensis; type=EST; length=521bp
GTTGAAGTTTCCTTCACAGTTTATGAGGATTTTGCTCACTACAAATCTGG
GGTCTACAAACACATCACAGGCGATGTAATGGGGGGTCATGCTGTTAAGC
TTATTGGTTGGGGAACTAGTGATGATGGCGAGGATTACTGGATTCTCGCT
AATCAGTGGAATAGAAGCTGGGGTGCGGATGGTTACTTCAAGATTAAAAG
AGGATCAAATGAGTGTGGTATTGAAGAGGATGTGGTTGCTGGTTTGCCTT
CATCCAAAAATCTTGTCAAAGAGATTACAAGTGCAGATATGTTTGAGGAT
GCTTCAGCTTGAGAGCAGACTTTGCTATACCTTCATGTTGTTATTTATAT
ATCAAATGTGTAGCTATAGGGGTGTATCGTTGAACCTAAGCTATCAAGGC
ATGAAATGGGAAGCTCCCGTCTTGCATAATTGAATGTATTAATGGAGTTT
AATGTTGTGTGTAAAAATAGAACCAGTTGTAATAACTTCGTTTCTCCTCG
CCGAATTATTCGTTTAGATGA
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