CK740106

Overview
NameCK740106
Unique NameCK740106
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length622
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2352 contig Csv1_Contig2352:125..750. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK740106 vs. ExPASy Swiss-Prot
Match: PROF_PRUAV (Profilin OS=Prunus avium PE=1 SV=1)

HSP 1 Score: 221.861 bits (564), Expect = 2.108e-57
Identity = 101/129 (78.29%), Postives = 116/129 (89.92%), Query Frame = 3
Query:  102 WQAYVDDHLLCEIEGNHLSAAAIIGHDGSVWAQSENFPQLKPEEITGIMNDFNEPGTLAPTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTIKKTSAALIIGIYDEPMTPGQCNMIVERLGDYLIDQGL 488
            WQAYVDDHL+C+I+GN L+AAAI+G DGSVW+QS  FP  KPEEI  I+ D ++PGTLAPTGL+LGGTKYMVIQGE GAVIRGKKG GG+T+KKT+ ALIIGIYDEP+TPGQCNMIVERLGDYLI+QGL
Sbjct:    3 WQAYVDDHLMCDIDGNRLTAAAILGQDGSVWSQSATFPAFKPEEIAAILKDLDQPGTLAPTGLFLGGTKYMVIQGEAGAVIRGKKGSGGITVKKTNQALIIGIYDEPLTPGQCNMIVERLGDYLIEQGL 131          
BLAST of CK740106 vs. ExPASy Swiss-Prot
Match: PROF1_OLEEU (Profilin-1 OS=Olea europaea GN=PRO1 PE=1 SV=1)

HSP 1 Score: 221.861 bits (564), Expect = 2.108e-57
Identity = 102/132 (77.27%), Postives = 117/132 (88.64%), Query Frame = 3
Query:  102 WQAYVDDHLLCEIEGNH---LSAAAIIGHDGSVWAQSENFPQLKPEEITGIMNDFNEPGTLAPTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTIKKTSAALIIGIYDEPMTPGQCNMIVERLGDYLIDQGL 488
            WQAYVDDHL+C+IEG+    L+AAAI+GHDGSVWAQS  FPQ KPEE+ GIM DFNEPG LAPTGL+LGGTKYMVIQGE GAVIRGKKG GG+TIKKT  AL+ GIY+EP+TPGQCNM+VERLGDYL++QG+
Sbjct:    3 WQAYVDDHLMCDIEGHEDHRLTAAAIVGHDGSVWAQSATFPQFKPEEMNGIMTDFNEPGHLAPTGLHLGGTKYMVIQGEAGAVIRGKKGSGGITIKKTGQALVFGIYEEPVTPGQCNMVVERLGDYLVEQGM 134          
BLAST of CK740106 vs. ExPASy Swiss-Prot
Match: PROF2_PARJU (Profilin-2 OS=Parietaria judaica GN=PRO2 PE=1 SV=1)

HSP 1 Score: 221.09 bits (562), Expect = 3.595e-57
Identity = 103/130 (79.23%), Postives = 119/130 (91.54%), Query Frame = 3
Query:  102 WQAYVDDHLLCEI-EGNHLSAAAIIGHDGSVWAQSENFPQLKPEEITGIMNDFNEPGTLAPTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTIKKTSAALIIGIYDEPMTPGQCNMIVERLGDYLIDQGL 488
            WQAYVDDHL+C++ +GN L++AAIIGHDGSVWAQS NFPQLKPEE+TGIMNDFNE G LAPTGL+LGGTKYMVIQGE GAVI GKKG GG T+KKT  A++IGIYDEPMTPGQCN++VERLGDYL++QG+
Sbjct:    3 WQAYVDDHLMCDVGDGNTLASAAIIGHDGSVWAQSANFPQLKPEEVTGIMNDFNEGGFLAPTGLFLGGTKYMVIQGESGAVI-GKKGSGGATLKKTGQAIVIGIYDEPMTPGQCNLVVERLGDYLLEQGM 131          
BLAST of CK740106 vs. ExPASy Swiss-Prot
Match: PROF3_OLEEU (Profilin-3 OS=Olea europaea GN=PRO3 PE=1 SV=1)

HSP 1 Score: 220.705 bits (561), Expect = 4.696e-57
Identity = 102/132 (77.27%), Postives = 116/132 (87.88%), Query Frame = 3
Query:  102 WQAYVDDHLLCEIEGNH---LSAAAIIGHDGSVWAQSENFPQLKPEEITGIMNDFNEPGTLAPTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTIKKTSAALIIGIYDEPMTPGQCNMIVERLGDYLIDQGL 488
            WQAYVDDHL+C+IEG+    L+AAAI+GHDGSVWAQS  FPQ KPEE+ GIM DFNEPG LAPTGL+LGGTKYMVIQGE GAVIRGKKG GG+TIKKT  AL+ GIY+EP+TPGQCNM+ ERLGDYL++QGL
Sbjct:    3 WQAYVDDHLMCDIEGHEGHRLTAAAIVGHDGSVWAQSATFPQFKPEEMNGIMTDFNEPGHLAPTGLHLGGTKYMVIQGEAGAVIRGKKGSGGITIKKTGQALVFGIYEEPVTPGQCNMVAERLGDYLLEQGL 134          
BLAST of CK740106 vs. ExPASy Swiss-Prot
Match: PROF2_MAIZE (Profilin-2 OS=Zea mays GN=PRO2 PE=2 SV=2)

HSP 1 Score: 220.705 bits (561), Expect = 4.696e-57
Identity = 97/129 (75.19%), Postives = 116/129 (89.92%), Query Frame = 3
Query:  102 WQAYVDDHLLCEIEGNHLSAAAIIGHDGSVWAQSENFPQLKPEEITGIMNDFNEPGTLAPTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTIKKTSAALIIGIYDEPMTPGQCNMIVERLGDYLIDQGL 488
            WQAYVD+HL+CEIEG+HL+AAAI+GHDG+ WAQS  FP+ K E++  IM DF+EPG LAPTGL+LG TKYMVIQGEPGAVIRGKKG GG+T+KKT  AL++GIYDEPMTPGQCNM+VERLGDYL++QG+
Sbjct:    3 WQAYVDEHLMCEIEGHHLAAAAIVGHDGAAWAQSTAFPEFKTEDMANIMKDFDEPGHLAPTGLFLGPTKYMVIQGEPGAVIRGKKGSGGITVKKTGQALVVGIYDEPMTPGQCNMVVERLGDYLLEQGM 131          
BLAST of CK740106 vs. ExPASy Swiss-Prot
Match: PROF5_ARATH (Profilin-5 OS=Arabidopsis thaliana GN=PRO5 PE=2 SV=1)

HSP 1 Score: 220.32 bits (560), Expect = 6.133e-57
Identity = 100/129 (77.52%), Postives = 113/129 (87.60%), Query Frame = 3
Query:  102 WQAYVDDHLLCEIEGNHLSAAAIIGHDGSVWAQSENFPQLKPEEITGIMNDFNEPGTLAPTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTIKKTSAALIIGIYDEPMTPGQCNMIVERLGDYLIDQGL 488
            WQ YVDDHL+C++ GN L+AAAI+G DGSVWAQS NFPQ+KPEEI GI +DF  PGTLAPTGL+LGG KYMVIQGEP AVIRGKKG GGVTIKKT+ AL+ GIYDEPMTPGQCNM+VE LG+YLI+ GL
Sbjct:    3 WQTYVDDHLMCDVAGNRLTAAAILGQDGSVWAQSNNFPQVKPEEIQGIKDDFTTPGTLAPTGLFLGGNKYMVIQGEPNAVIRGKKGAGGVTIKKTTLALVFGIYDEPMTPGQCNMVVENLGEYLIESGL 131          
BLAST of CK740106 vs. ExPASy Swiss-Prot
Match: PROF1_SOLLC (Profilin-1 OS=Solanum lycopersicum GN=PRO1 PE=2 SV=1)

HSP 1 Score: 219.935 bits (559), Expect = 8.010e-57
Identity = 100/130 (76.92%), Postives = 117/130 (90.00%), Query Frame = 3
Query:  102 WQAYVDDHLLCEIEG--NHLSAAAIIGHDGSVWAQSENFPQLKPEEITGIMNDFNEPGTLAPTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTIKKTSAALIIGIYDEPMTPGQCNMIVERLGDYLIDQG 485
            WQ YVDDHL+C+IEG  +HLS+AAI+G DGSVWAQS NFP+ K EEIT IM DF+EPG LAPTGL+L GTKYMVIQGEPGAVIRGKKGPGG+TIKKT+ ALI G+Y+EP+TPGQCNM+VE++GDYL+DQG
Sbjct:    3 WQTYVDDHLMCDIEGTGHHLSSAAILGFDGSVWAQSPNFPKFKAEEITNIMKDFDEPGHLAPTGLFLAGTKYMVIQGEPGAVIRGKKGPGGITIKKTAQALIFGVYEEPVTPGQCNMVVEKIGDYLVDQG 132          
BLAST of CK740106 vs. ExPASy Swiss-Prot
Match: PROF1_ARATH (Profilin-1 OS=Arabidopsis thaliana GN=PRO1 PE=1 SV=1)

HSP 1 Score: 218.779 bits (556), Expect = 1.784e-56
Identity = 100/129 (77.52%), Postives = 113/129 (87.60%), Query Frame = 3
Query:  102 WQAYVDDHLLCEIEGNHLSAAAIIGHDGSVWAQSENFPQLKPEEITGIMNDFNEPGTLAPTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTIKKTSAALIIGIYDEPMTPGQCNMIVERLGDYLIDQGL 488
            WQ+YVDDHL+C++EGNHL+AAAI+G DGSVWAQS  FPQLKP+EI GI  DF EPG LAPTGL+LGG KYMVIQGE GAVIRGKKGPGGVTIKKT+ AL+ G YDEPMT GQCN++VERLGDYLI+  L
Sbjct:    3 WQSYVDDHLMCDVEGNHLTAAAILGQDGSVWAQSAKFPQLKPQEIDGIKKDFEEPGFLAPTGLFLGGEKYMVIQGEQGAVIRGKKGPGGVTIKKTNQALVFGFYDEPMTGGQCNLVVERLGDYLIESEL 131          
BLAST of CK740106 vs. ExPASy Swiss-Prot
Match: PROF_CROSA (Profilin OS=Crocus sativus PE=1 SV=1)

HSP 1 Score: 218.394 bits (555), Expect = 2.330e-56
Identity = 96/128 (75.00%), Postives = 116/128 (90.62%), Query Frame = 3
Query:  102 WQAYVDDHLLCEIEGNHLSAAAIIGHDGSVWAQSENFPQLKPEEITGIMNDFNEPGTLAPTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTIKKTSAALIIGIYDEPMTPGQCNMIVERLGDYLIDQG 485
            WQ YVD+HL+C+++G+ L++AAI+GHDGSVWAQS  FP+LKP EIT I+NDFNEPG+LAPTG+Y+ G KYMVIQGEPG VIRGKKG GGVTIKK++ ALI G+YDEPMTPGQCN++VERLGDYLI+QG
Sbjct:    3 WQTYVDEHLMCDMDGHVLTSAAILGHDGSVWAQSAGFPELKPAEITAILNDFNEPGSLAPTGMYINGAKYMVIQGEPGVVIRGKKGSGGVTIKKSNMALIFGLYDEPMTPGQCNLVVERLGDYLIEQG 130          
BLAST of CK740106 vs. ExPASy Swiss-Prot
Match: PROF2_TOBAC (Profilin-2 OS=Nicotiana tabacum GN=PRO2 PE=2 SV=1)

HSP 1 Score: 217.238 bits (552), Expect = 5.192e-56
Identity = 100/131 (76.34%), Postives = 116/131 (88.55%), Query Frame = 3
Query:  102 WQAYVDDHLLCEIEG---NHLSAAAIIGHDGSVWAQSENFPQLKPEEITGIMNDFNEPGTLAPTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTIKKTSAALIIGIYDEPMTPGQCNMIVERLGDYLIDQG 485
            WQ YVDDHL+ +IEG   NHL+AAAI+G+DGSVWAQS  FP+ KPEEIT IM DF+EPG LAPTGL+LGG KYMVIQGEPGAVIRGKKG GG+TIKKT+ ALI GIY+EP+TPGQCNM+VE++GDYL+DQG
Sbjct:    3 WQTYVDDHLMADIEGQQGNHLAAAAILGNDGSVWAQSTTFPKFKPEEITNIMKDFDEPGHLAPTGLFLGGAKYMVIQGEPGAVIRGKKGSGGITIKKTNQALIFGIYEEPVTPGQCNMVVEKIGDYLVDQG 133          
The following BLAST results are available for this feature:
BLAST of CK740106 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 89
Match NameE-valueIdentityDescription
PROF_PRUAV2.108e-5778.29Profilin OS=Prunus avium PE=1 SV=1[more]
PROF1_OLEEU2.108e-5777.27Profilin-1 OS=Olea europaea GN=PRO1 PE=1 SV=1[more]
PROF2_PARJU3.595e-5779.23Profilin-2 OS=Parietaria judaica GN=PRO2 PE=1 SV=1[more]
PROF3_OLEEU4.696e-5777.27Profilin-3 OS=Olea europaea GN=PRO3 PE=1 SV=1[more]
PROF2_MAIZE4.696e-5775.19Profilin-2 OS=Zea mays GN=PRO2 PE=2 SV=2[more]
PROF5_ARATH6.133e-5777.52Profilin-5 OS=Arabidopsis thaliana GN=PRO5 PE=2 SV... [more]
PROF1_SOLLC8.010e-5776.92Profilin-1 OS=Solanum lycopersicum GN=PRO1 PE=2 SV... [more]
PROF1_ARATH1.784e-5677.52Profilin-1 OS=Arabidopsis thaliana GN=PRO1 PE=1 SV... [more]
PROF_CROSA2.330e-5675.00Profilin OS=Crocus sativus PE=1 SV=1[more]
PROF2_TOBAC5.192e-5676.34Profilin-2 OS=Nicotiana tabacum GN=PRO2 PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_6600 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE65E05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK740106 ID=CK740106; Name=CK740106; organism=Citrus sinensis; type=EST; length=622bp
CAAAAATTAAGTCTTAAACACACTCATTTGTAAAAAGGCTTCAGGAAAAA
AAAAAATTCACAGAGAAATCAGAGGAATCATCAAAGCAGAAAAAGATGTC
GTGGCAAGCTTACGTCGATGATCATCTGTTGTGTGAAATTGAGGGTAACC
ATCTCTCAGCTGCCGCTATCATCGGCCACGACGGCAGCGTTTGGGCCCAG
AGTGAAAACTTCCCTCAGTTAAAACCTGAGGAAATAACTGGTATCATGAA
TGACTTTAATGAACCTGGAACACTAGCACCAACTGGACTGTATCTTGGTG
GCACAAAATATATGGTGATCCAGGGTGAGCCAGGTGCTGTCATCCGAGGG
AAGAAGGGCCCTGGTGGTGTTACCATCAAGAAGACCAGTGCGGCCTTAAT
CATTGGAATCTATGATGAGCCGATGACCCCTGGGCAGTGCAACATGATTG
TTGAAAGGCTTGGTGATTATCTCATTGATCAGGGTCTTTAGGTGGTTTGC
ATGTCCGCTAATTTGTTTCATTTCTTGGCTTCCCTAAAAAGCTCGCACTG
TTGAACTTCGGTGTAATAATATTACAGTATTCAAAGTTATGGGAACTGTG
TGTGGAAAGGAAAGGTTTGGTG
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