CK740107
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK740107 vs. ExPASy Swiss-Prot
Match: MPPB_NEUCR (Mitochondrial-processing peptidase subunit beta OS=Neurospora crassa GN=pep PE=1 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 1.417e-33 Identity = 77/164 (46.95%), Postives = 111/164 (67.68%), Query Frame = 1 Query: 4 DDDIPLAQFAVAFAGASWTDPDSIALMVMQAMLGSWNKNSVGGKHMGSELAQRVGINEIAESMMAFNTNYKDTGLFGVYAVA-KPDCLNDLAYAIMYETTKLAYRVSEADVTRARNQLKSSLLLHIDGTSPVAEDIGRQLLTYGRRIPFAELFARIDSVDASTV 492 DD IP A A+A G SW+D D +V QA++G+++K H GS+L+ V +++A S M+F+T+Y DTGL+G+Y V K D ++DL + + E T+L VSEA+V RA+ QLK+S+LL +DGT+ VAEDIGRQ++T GRR+ AE+ ID+V A V Sbjct: 274 DDTIPTANIAIAVEGVSWSDDDYFTGLVTQAIVGNYDKALGNAPHQGSKLSGFVHKHDLATSFMSFSTSYSDTGLWGIYLVTDKLDRVDDLVHFSLREWTRLCSNVSEAEVERAKAQLKASILLSLDGTTAVAEDIGRQIVTTGRRMSPAEIERIIDAVSAKDV 437
BLAST of CK740107 vs. ExPASy Swiss-Prot
Match: MPPB_DICDI (Mitochondrial-processing peptidase subunit beta OS=Dictyostelium discoideum GN=mppB PE=1 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 3.158e-33 Identity = 70/170 (41.18%), Postives = 107/170 (62.94%), Query Frame = 1 Query: 4 DDDIPLAQFAVAFAGASWTDPDSIALMVMQAMLGSWNKNSVGGKHMGSELAQRVGINEIAESMMAFNTNYKDTGLFGVYAVAKPDCLNDLAYAIMYETTKLAYRVSEADVTRARNQLKSSLLLHIDGTSPVAEDIGRQLLTYGRRIPFAELFARIDSVDASTVKRVATDL 513 DD+ PL FAVA WTDPD L ++Q M+G+WN+ GK++ S L + V ++AES F T Y+DTGLFG Y V +P+ ++DL ++ E ++A ++ +V R + +L ++ L+ DGTS V E IGRQ+LT GRR+ E++ RI+ + + V+RVA+ L Sbjct: 268 DDEQPLIHFAVAVRALPWTDPDYFVLELIQTMIGNWNRGIAAGKNIASNLGEIVATEDLAESYSTFFTCYQDTGLFGNYGVCQPERVDDLVAEMLKEWQRIATSCNKNEVERNKQKLLATTLMQYDGTSKVCEGIGRQILTLGRRLSPFEVYTRINEITVADVQRVASTL 437
BLAST of CK740107 vs. ExPASy Swiss-Prot
Match: QCR1_HUMAN (Cytochrome b-c1 complex subunit 1, mitochondrial OS=Homo sapiens GN=UQCRC1 PE=1 SV=3) HSP 1 Score: 139.043 bits (349), Expect = 1.200e-32 Identity = 67/168 (39.88%), Postives = 103/168 (61.31%), Query Frame = 1 Query: 4 DDDIPLAQFAVAFAGASWTDPDSIALMVMQAMLGSWNKNSVGGKHMGSELAQRVGINEIAESMMAFNTNYKDTGLFGVYAVAKPDCLNDLAYAIMYETTKLAYRVSEADVTRARNQLKSSLLLHIDGTSPVAEDIGRQLLTYGRRIPFAELFARIDSVDASTVKRVAT 507 DD +P A A+A G W PD++AL V A++G ++ GG H+ S LA N++ +S F+ Y +TGL G + V ++D+ + + + +L +E++V R +N L+++L+ H+DGT+PV EDIGR LLTYGRRIP AE +RI VDAS V+ + + Sbjct: 279 DDALPFAHVAIAVEGPGWASPDNVALQVANAIIGHYDCTYGGGVHLSSPLASGAVANKLCQSFQTFSICYAETGLLGAHFVCDRMKIDDMMFVLQGQWMRLCTSATESEVARGKNILRNALVSHLDGTTPVCEDIGRSLLTYGRRIPLAEWESRIAEVDASVVREICS 446
BLAST of CK740107 vs. ExPASy Swiss-Prot
Match: MPPB_LENED (Mitochondrial-processing peptidase subunit beta OS=Lentinula edodes GN=mppB PE=3 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 1.200e-32 Identity = 67/168 (39.88%), Postives = 111/168 (66.07%), Query Frame = 1 Query: 4 DDDIPLAQFAVAFAGASWTDPDSIALMVMQAMLGSWNKNSVGGKHMGSELAQRVGINEIAESMMAFNTNYKDTGLFGVYAVAKPDC-LNDLAYAIMYETTKLAYRVSEADVTRARNQLKSSLLLHIDGTSPVAEDIGRQLLTYGRRIPFAELFARIDSVDASTVKRVA 504 DD++P A A+A G W+ PD +MVMQ++ G+W+++ + S L+ + N +A S M+F+T+Y DTGL+G+Y V++ L+D + + E T+++ +E +V RA++QLK+ LLL +DGT+ VAEDIGRQ++T G+R+ A++ +D+V +KRVA Sbjct: 264 DDELPTAHVAIAVEGVGWSSPDYFPMMVMQSIFGNWDRSLGASSLLSSRLSHIISSNSLANSFMSFSTSYSDTGLWGIYLVSENLMNLDDTLHFTLKEWTRMSIAPTEGEVERAKSQLKAGLLLSLDGTTAVAEDIGRQIVTSGKRMTPAQIENAVDAVSVDDIKRVA 431
BLAST of CK740107 vs. ExPASy Swiss-Prot
Match: MPPB_SCHPO (Probable mitochondrial-processing peptidase subunit beta OS=Schizosaccharomyces pombe GN=qcr1 PE=2 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 1.467e-30 Identity = 70/171 (40.94%), Postives = 107/171 (62.57%), Query Frame = 1 Query: 4 DDDIPLAQFAVAFAGASWTDPDSIALMVMQAMLGSWNKNSVGGKHMGSELAQRVGINEIAESMMAFNTNYKDTGLFGVYAVAKP-DCLNDLAYAIMYETTKLAYRVSEADVTRARNQLKSSLLLHIDGTSPVAEDIGRQLLTYGRRIPFAELFARIDSVDASTVKRVATDL 513 DDD P A A+A G SW PD +VMQA++G+W++ H+ S L+ V +++A S M+F+T+Y DTGL+G+Y V + ++DL + + +L + A+V RA+ QL++SLLL +D T+ +AEDIGRQLLT GRR+ E+ RI + V RVA+++ Sbjct: 256 DDDSPTANIAIAVEGMSWKHPDYFTALVMQAIIGNWDRAMGASPHLSSRLSTIVQQHQLANSFMSFSTSYSDTGLWGIYLVTENLGRIDDLVHFTLQNWARLTV-ATRAEVERAKAQLRASLLLSLDSTTAIAEDIGRQLLTTGRRMSPQEVDLRIGQITEKDVARVASEM 425
BLAST of CK740107 vs. ExPASy Swiss-Prot
Match: MPPB_YEAST (Mitochondrial-processing peptidase subunit beta OS=Saccharomyces cerevisiae GN=MAS1 PE=1 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 5.053e-23 Identity = 57/162 (35.19%), Postives = 101/162 (62.35%), Query Frame = 1 Query: 4 DDDIPLAQFAVAFAGASWTDPDSIALMVMQAMLGSWNKNSVGGKHMGSELAQRVGIN-EIAESMMAFNTNYKDTGLFGVYAVAKPDCLND--LAYAIMYETTKL-AYRVSEADVTRARNQLKSSLLLHIDGTSPVAEDIGRQLLTYGRRIPFAELFARIDSV 477 ++ +P A+A G SW+ PD + QA++G+W++ G + S LA N +A S M+F+T+Y D+GL+G+Y V + N + I+ E ++ + ++S+A+V RA+ QLK++LLL +DG++ + EDIGRQ++T G+R+ E+F ++D + Sbjct: 260 ENTLPTTHIAIALEGVSWSAPDYFVALATQAIVGNWDRAIGTGTNSPSPLAVAASQNGSLANSYMSFSTSYADSGLWGMYIVTDSNEHNVQLIVNEILKEWKRIKSGKISDAEVNRAKAQLKAALLLSLDGSTAIVEDIGRQVVTTGKRLSPEEVFEQVDKI 421
BLAST of CK740107 vs. ExPASy Swiss-Prot
Match: QCR1_EUGGR (Ubiquinol-cytochrome-c reductase complex core protein I, mitochondrial OS=Euglena gracilis PE=2 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 3.066e-20 Identity = 62/184 (33.70%), Postives = 98/184 (53.26%), Query Frame = 1 Query: 16 PLAQFAVAFAGASWTDPDSIALMVMQAMLGSWNKNSVGGKHMGSELA----------------QRVGINEIAESMMAFNTNYKDTGLFGVYAVAKP------DCLNDLAYAIMYETTKLAYRVSEADVTRARNQLKSSLLLHIDGTSPVAEDIGRQLLTYGRRIPFAELFARIDSVDASTVKRV 501 PL AVAF + PD+I + V++ +LGS++++ + A + G N I S+ AF Y D GL G YA+A+P + N L YA M E +++ +SE + RA+NQLK +L +DGT+ +A+DIGRQ+L++G R+P A F ++D++ + RV Sbjct: 259 PLTHVAVAFQTPGISHPDAIKIKVLEQLLGSYSRDKGEAAYSCFARAIVMDFYDPKVGQFFRPNKAGHNPI-HSLNAFWAPYSDVGLLGFYAIAEPGKSYGHEWENILHYA-MRELIRVSRNISEEEFERAKNQLKLQTMLQLDGTTNIADDIGRQVLSFGARVPLASFFEQLDAISREDLIRV 440
BLAST of CK740107 vs. ExPASy Swiss-Prot
Match: UCR1_CAEEL (Cytochrome b-c1 complex subunit 1, mitochondrial OS=Caenorhabditis elegans GN=ucr-1 PE=2 SV=2) HSP 1 Score: 93.2041 bits (230), Expect = 7.551e-19 Identity = 52/167 (31.14%), Postives = 87/167 (52.10%), Query Frame = 1 Query: 4 DDDIPLAQFAVAFAGASWTDPDSIALMVMQAMLGSWNKNSVGGKHMGSELAQRVGINEIAESMMAFNTNYKDTGLFGVYAVAKPDCLND---LAYAIMYETTKLAYRVSEADVTRARNQLKSSLLLHIDGTSPVAEDIGRQLLTYGRRIPFAELFARIDSVDASTVK 495 +D++P A A G + D++AL + +G W+ + S L Q++G + ++ FN NYKDTGLFG+Y VA LND + ++ +E LA +E +V A+NQ +++L +++ + A ++LL G +EL A+I VDA V+ Sbjct: 267 NDNVPHMYAAFAVEGVGYAHKDALALQIANQFIGQWDVTHATSRTAASRLVQKIGHDHGVHNLQHFNINYKDTGLFGIYFVADAHDLNDTSGIMKSVAHEWKHLASAATEEEVAMAKNQFRTNLYQNLETNTQKAGFNAKELLYTGNLRQLSELEAQIQKVDAGAVR 433
BLAST of CK740107 vs. ExPASy Swiss-Prot
Match: MPPA_YEAST (Mitochondrial-processing peptidase subunit alpha OS=Saccharomyces cerevisiae GN=MAS2 PE=1 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 7.551e-19 Identity = 61/170 (35.88%), Postives = 91/170 (53.53%), Query Frame = 1 Query: 19 LAQFAVAFAGASWTDPDSIALMVMQAMLGSWNKNSVGG--KHMGSELAQRVGINE--IAESMMAFNTNYKDTGLFGVYAVAKPDCLNDLAYAI---MYET-TKLAYRVSEADVTRARNQLKSSLLLHIDGTSPVAEDIGRQLLTYGRRIPFAELFARIDSVDASTVKRVA 504 L + F G PD AL +Q +LG S GG K M S L V +N+ E+ +AFN +Y D+G+FG+ P I MY T R++E +V+RA+NQLKSSLL++++ ED+GRQ+L +GR+IP E+ ++I+ + + RVA Sbjct: 256 LFHIQIGFEGLPIDHPDIYALATLQTLLGGGGSFSAGGPGKGMYSRLYTHV-LNQYYFVENCVAFNHSYSDSGIFGISLSCIPQAAPQAVEVIAQQMYNTFANKDLRLTEDEVSRAKNQLKSSLLMNLESKLVELEDMGRQVLMHGRKIPVNEMISKIEDLKPDDISRVA 424
BLAST of CK740107 vs. ExPASy Swiss-Prot
Match: MPPA_NEUCR (Mitochondrial-processing peptidase subunit alpha OS=Neurospora crassa GN=mpp PE=1 SV=2) HSP 1 Score: 91.2781 bits (225), Expect = 2.869e-18 Identity = 62/166 (37.35%), Postives = 93/166 (56.02%), Query Frame = 1 Query: 34 VAFAGASWTDPDSIALMVMQAMLGSWNKNSVGG--KHMGSELAQRVGINEIA--ESMMAFNTNYKDTGLFGVYAVAKPDCLNDLAYAIMYE----TTKLAYR-VSEADVTRARNQLKSSLLLHIDGTSPVAEDIGRQLLTYGRRIPFAELFARIDSVDASTVKRVA 504 +AF G + +D D AL +Q +LG S GG K M S L V +N+ ES +AFN +Y D+GLFG+ A P + + E TT Y + E +V+RA+NQL+SSLL++++ ED+GRQ+ +GR+IP E+ RI+ + ++RVA Sbjct: 361 LAFEGLAISDDDIYALATLQTLLGGGGSFSAGGPGKGMYSRLYTNV-LNQHGWVESCVAFNHSYTDSGLFGIAASCYPGRTLPMLQVMCRELHALTTDHGYSALGELEVSRAKNQLRSSLLMNLESRMVELEDLGRQVQVHGRKIPVREMTRRINELTVKDLRRVA 525 The following BLAST results are available for this feature:
BLAST of CK740107 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 33
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Sequences
The
following sequences are available for this feature:
EST sequence >CK740107 ID=CK740107; Name=CK740107; organism=Citrus sinensis; type=EST; length=514bpback to top |