CK740107
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK740107 vs. ExPASy Swiss-Prot
Match: QCR2_RAT (Cytochrome b-c1 complex subunit 2, mitochondrial OS=Rattus norvegicus GN=Uqcrc2 PE=1 SV=2) HSP 1 Score: 67.0106 bits (162), Expect = 5.795e-11 Identity = 49/162 (30.25%), Postives = 84/162 (51.85%), Query Frame = 1 Query: 19 LAQFAVAFAGASWTDPDSIALMVMQAMLGSWNKNSVGGKHMGSELAQRVGI-NEIAESMMAFNTNYKDTGLFGVYAVAKPDCLNDLAYAIMYETTKLAY-RVSEADVTRARNQLKSSLLLHIDGTSPVAEDIGRQLLTYGRRIPFAELFARIDSV-DASTVK 495 L A+ A+ + ++ A V+Q +LG+ + G + S L+Q V ++ + AFN +Y D+GLFG+Y V++ D+ A + +A +S ADV A+N+LK+ L+ ++ + +IG Q L G +P + +ID+V DA VK Sbjct: 265 LVHAAIVAESAAIGNAEANAFSVLQHLLGA-GPHIKRGNNTTSLLSQSVAKGSQQPFDVSAFNASYSDSGLFGIYTVSQAAAAGDVINAAYNQVKAVAQGNLSSADVQAAKNKLKAGYLMSVETSEGFLSEIGSQALATGSYMPPPTVLQQIDAVADADVVK 425
BLAST of CK740107 vs. ExPASy Swiss-Prot
Match: QCR2_MOUSE (Cytochrome b-c1 complex subunit 2, mitochondrial OS=Mus musculus GN=Uqcrc2 PE=1 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 7.568e-11 Identity = 48/162 (29.63%), Postives = 83/162 (51.23%), Query Frame = 1 Query: 19 LAQFAVAFAGASWTDPDSIALMVMQAMLGSWNKNSVGGKHMGSELAQRVGINEIAE-SMMAFNTNYKDTGLFGVYAVAKPDCLNDLAYAIMYETTKLAY-RVSEADVTRARNQLKSSLLLHIDGTSPVAEDIGRQLLTYGRRIPFAELFARIDSV-DASTVK 495 L A+ A+ + ++ A V+Q +LG+ + G + S L+Q V + AFN +Y D+GLFG+Y +++ ++ A + +A +S ADV A+N+LK+ L+ ++ + +IG Q L G +P + + +IDSV DA VK Sbjct: 266 LVHAAIVAESAAIGNAEANAFSVLQHLLGA-GPHIKRGNNTTSLLSQSVAKGSHQPFDVSAFNASYSDSGLFGIYTISQAAAAGEVINAAYNQVKAVAQGNLSSADVQAAKNKLKAGYLMSVETSEGFLSEIGSQALAAGSYMPPSTVLQQIDSVADADVVK 426
BLAST of CK740107 vs. ExPASy Swiss-Prot
Match: QCR1_YEAST (Cytochrome b-c1 complex subunit 1, mitochondrial OS=Saccharomyces cerevisiae GN=COR1 PE=1 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 7.568e-11 Identity = 42/167 (25.15%), Postives = 81/167 (48.50%), Query Frame = 1 Query: 4 DDDIPLAQFAVAFAGASWTDPDSIALMVMQAMLGSWNKNSVGGKHMGSELAQRVGINEIAESMMAFNTNYKDTGLFGV-YAVAKPDCLNDLAYAIMYETTKLAYRVSEADVTRARNQLKSSLLLHIDGTSPV--AEDIGRQLLTYGRRIPFAELFARIDSVDASTVK 495 DD +P A ++A G P+ + + GS+N + G +L + ++ ++ F+ +YKD+GL+G A ++DL + + + +L V++ +V RA++ LK L + +PV A +G ++L G ++ E F +ID++ VK Sbjct: 253 DDTLPKAWISLAVEGEPVNSPNYFVAKLAAQIFGSYNAFEPASRLQGIKLLDNIQEYQLCDNFNHFSLSYKDSGLWGFSTATRNVTMIDDLIHFTLKQWNRLTISVTDTEVERAKSLLKLQLGQLYESGNPVNDANLLGAEVLIKGSKLSLGEAFKKIDAITVKDVK 419 The following BLAST results are available for this feature:
BLAST of CK740107 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 33
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CK740107 ID=CK740107; Name=CK740107; organism=Citrus sinensis; type=EST; length=514bpback to top |