CK740108
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK740108 vs. ExPASy Swiss-Prot
Match: CH602_BRAJA (60 kDa chaperonin 2 OS=Bradyrhizobium japonicum GN=groL2 PE=2 SV=2) HSP 1 Score: 156.762 bits (395), Expect = 7.587e-42 Identity = 82/172 (47.67%), Postives = 123/172 (71.51%), Query Frame = 2 Query: 110 RKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXKV-KDSEWTTGYNAMTDKYENML 622 +KV I K++TTI++ A K +I+AR+AQ+K ++ ET S YD EKL ER+AKL+GGVAVI+VG ATE E+++RK R++DA +AT AA+EEGI+PGGG AL+ S+H+ I+ K + D++ G +IV+KAL PA IA NA K+ + +++ GY++ T +Y N++ Sbjct: 321 KKVMIDKENTTIVSGAGKKADIEARVAQIKAQIEETTSDYDREKLQERLAKLAGGVAVIRVGGATEVEVKERKDRVDDAMHATRAAVEEGILPGGGVALLRASEHLKGIRTK--NDDQKTGVEIVRKALSYPARQIAINAGEDGSVIVGKILEKDQYSYGYDSQTGEYGNLV 490 HSP 2 Score: 34.2686 bits (77), Expect = 7.587e-42 Identity = 15/29 (51.72%), Postives = 23/29 (79.31%), Query Frame = 3 Query: 3 KALLQDIAIVTGAEFQAGDLGLLIENTSV 89 KA+LQDIAI+TG + + DLG+ +EN ++ Sbjct: 286 KAMLQDIAILTGGQAISEDLGIKLENVTL 314
BLAST of CK740108 vs. ExPASy Swiss-Prot
Match: CH60_LACZE (60 kDa chaperonin OS=Lactobacillus zeae GN=groL PE=3 SV=1) HSP 1 Score: 159.458 bits (402), Expect = 7.588e-42 Identity = 88/169 (52.07%), Postives = 115/169 (68.05%), Query Frame = 2 Query: 113 KVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXKVKDSEWTTGYNAMTDKYENM 619 KVT+ KD+TTI+ A SKD I R+ +KK++ +T S +D EKL ER+AKL+GGVAV+KVGAATETEL++RK RIEDA NAT AA+EEG V GGG ALV D +PA+ E+ D + G +IV +AL P IA NA ++K + GYNA TD++E+M Sbjct: 320 KVTVTKDNTTIVDGAGSKDAIAERVNIIKKQIDDTTSDFDREKLQERLAKLAGGVAVVKVGAATETELKERKYRIEDALNATRAAVEEGYVAGGGTALV---DVLPAVAALKEEGDVQTGINIVLRALEEPVRQIAENAGKEGSVIVEQLKKEKQGVGYNAATDEWEDM 485 HSP 2 Score: 31.5722 bits (70), Expect = 7.588e-42 Identity = 15/31 (48.39%), Postives = 22/31 (70.97%), Query Frame = 3 Query: 3 KALLQDIAIVTGAEFQAGDLGLLIENTSVEQ 95 KA L+DIA +TG + DLGL +++T +EQ Sbjct: 284 KAQLEDIATLTGGTVISSDLGLDLKDTKLEQ 314
BLAST of CK740108 vs. ExPASy Swiss-Prot
Match: CH60_LACCB (60 kDa chaperonin OS=Lactobacillus casei (strain BL23) GN=groL PE=3 SV=1) HSP 1 Score: 159.458 bits (402), Expect = 7.588e-42 Identity = 88/169 (52.07%), Postives = 115/169 (68.05%), Query Frame = 2 Query: 113 KVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXKVKDSEWTTGYNAMTDKYENM 619 KVT+ KD+TTI+ A SKD I R+ +KK++ +T S +D EKL ER+AKL+GGVAV+KVGAATETEL++RK RIEDA NAT AA+EEG V GGG ALV D +PA+ E+ D + G +IV +AL P IA NA ++K + GYNA TD++E+M Sbjct: 320 KVTVTKDNTTIVDGAGSKDAIAERVNIIKKQIDDTTSDFDREKLQERLAKLAGGVAVVKVGAATETELKERKYRIEDALNATRAAVEEGYVAGGGTALV---DVLPAVAALKEEGDVQTGINIVLRALEEPVRQIAENAGKEGSVIVEQLKKEKQGVGYNAATDEWEDM 485 HSP 2 Score: 31.5722 bits (70), Expect = 7.588e-42 Identity = 15/31 (48.39%), Postives = 22/31 (70.97%), Query Frame = 3 Query: 3 KALLQDIAIVTGAEFQAGDLGLLIENTSVEQ 95 KA L+DIA +TG + DLGL +++T +EQ Sbjct: 284 KAQLEDIATLTGGTVISSDLGLDLKDTKLEQ 314
BLAST of CK740108 vs. ExPASy Swiss-Prot
Match: CH60_LACC3 (60 kDa chaperonin OS=Lactobacillus casei (strain ATCC 334) GN=groL PE=3 SV=1) HSP 1 Score: 159.458 bits (402), Expect = 7.588e-42 Identity = 88/169 (52.07%), Postives = 115/169 (68.05%), Query Frame = 2 Query: 113 KVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXKVKDSEWTTGYNAMTDKYENM 619 KVT+ KD+TTI+ A SKD I R+ +KK++ +T S +D EKL ER+AKL+GGVAV+KVGAATETEL++RK RIEDA NAT AA+EEG V GGG ALV D +PA+ E+ D + G +IV +AL P IA NA ++K + GYNA TD++E+M Sbjct: 320 KVTVTKDNTTIVDGAGSKDAIAERVNIIKKQIDDTTSDFDREKLQERLAKLAGGVAVVKVGAATETELKERKYRIEDALNATRAAVEEGYVAGGGTALV---DVLPAVAALKEEGDVQTGINIVLRALEEPVRQIAENAGKEGSVIVEQLKKEKQGVGYNAATDEWEDM 485 HSP 2 Score: 31.5722 bits (70), Expect = 7.588e-42 Identity = 15/31 (48.39%), Postives = 22/31 (70.97%), Query Frame = 3 Query: 3 KALLQDIAIVTGAEFQAGDLGLLIENTSVEQ 95 KA L+DIA +TG + DLGL +++T +EQ Sbjct: 284 KAQLEDIATLTGGTVISSDLGLDLKDTKLEQ 314
BLAST of CK740108 vs. ExPASy Swiss-Prot
Match: CH601_SYNY3 (60 kDa chaperonin 1 OS=Synechocystis sp. (strain PCC 6803) GN=groL1 PE=1 SV=4) HSP 1 Score: 162.54 bits (410), Expect = 7.588e-42 Identity = 91/175 (52.00%), Postives = 124/175 (70.86%), Query Frame = 2 Query: 110 RKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKD----KLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXKVKDSEWTTGYNAMTDKYENML 622 R++ I KD+TTI+A+ ++ +++R Q+++++ ETDS YD EKL ER+AKL+GGVAVIKVGAATETE++DRKLR+EDA NAT AA+EEGIVPGGG L HL+ P ++D L+D +E GA IV +AL AP IA NA +VK+ E+ GYNA + +Y +ML Sbjct: 320 RRINITKDNTTIVAEG-NEAAVKSRCEQIRRQIEETDSSYDKEKLQERLAKLAGGVAVIKVGAATETEMKDRKLRLEDAINATKAAVEEGIVPGGGTTLAHLA---PQLEDWATGNLKD-EELTGALIVARALPAPLKRIAENAGQNGAVISERVKEKEFNVGYNAASLEYVDML 489 HSP 2 Score: 28.4906 bits (62), Expect = 7.588e-42 Identity = 12/30 (40.00%), Postives = 21/30 (70.00%), Query Frame = 3 Query: 3 KALLQDIAIVTGAEFQAGDLGLLIENTSVE 92 K +L+DIA +TG + + D GL +E+ +V+ Sbjct: 285 KQMLEDIATLTGGQVISEDAGLKLESATVD 314
BLAST of CK740108 vs. ExPASy Swiss-Prot
Match: CH60_LACF3 (60 kDa chaperonin OS=Lactobacillus fermentum (strain IFO 3956 / LMG 18251) GN=groL PE=3 SV=1) HSP 1 Score: 160.229 bits (404), Expect = 7.588e-42 Identity = 90/173 (52.02%), Postives = 120/173 (69.36%), Query Frame = 2 Query: 113 KVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLE---DADERLGADIVQKALVAPASLIAHNAXXXXXXXXXKVKDSEWTTGYNAMTDKYENML 622 KVTI KD+TTI+ + +K+ I R+ Q+KK +AET S +D EKL ER+AKL+GGVAV+KVGAATETEL+++K RIEDA NAT AA++EG VPGGG ALV++ +PA+ D++E DE G IV+ AL AP IA NA ++K + GYNA DK+E+M+ Sbjct: 320 KVTITKDATTIVDGSGNKEAIAERVDQIKKAIAETTSDFDKEKLQERLAKLAGGVAVVKVGAATETELKEKKYRIEDALNATRAAVQEGFVPGGGTALVNV---IPAL-DEVEASATGDEATGIKIVKAALEAPVRQIAENAGLEGSVIVNQLKQEKPGVGYNAADDKFEDMV 488 HSP 2 Score: 30.8018 bits (68), Expect = 7.588e-42 Identity = 12/31 (38.71%), Postives = 23/31 (74.19%), Query Frame = 3 Query: 3 KALLQDIAIVTGAEFQAGDLGLLIENTSVEQ 95 KA L+DIA++TG + DLG+ +++ +++Q Sbjct: 284 KAQLEDIAVLTGGTVISDDLGMQLKDATIDQ 314
BLAST of CK740108 vs. ExPASy Swiss-Prot
Match: CH602_SYNAS (60 kDa chaperonin 2 OS=Syntrophus aciditrophicus (strain SB) GN=groL2 PE=3 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 9.887e-42 Identity = 83/171 (48.54%), Postives = 116/171 (67.84%), Query Frame = 2 Query: 110 RKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXKVKDSEWTTGYNAMTDKYENML 622 +++ I KD+TTII A + ++ R+ Q++ ++ ET S YD EKL ER+AKL GGVAVIKVGAATETE++++K R+EDA NAT AA+EEGIVPGGG A + + A+K + DE++G +IV+KAL P +IA NA KVK+ G+NA T+ YE+M+ Sbjct: 321 KRIQIDKDNTTIIDGAGERAALEGRVKQIRAQIDETTSDYDREKLQERLAKLVGGVAVIKVGAATETEMKEKKARVEDALNATRAAVEEGIVPGGGVAYIRTLPILEALK---LEGDEQVGVNIVRKALEEPLKMIAANAGMEGTIVVEKVKEQSGAFGFNARTEVYEDMI 488 HSP 2 Score: 33.4982 bits (75), Expect = 9.887e-42 Identity = 15/30 (50.00%), Postives = 22/30 (73.33%), Query Frame = 3 Query: 3 KALLQDIAIVTGAEFQAGDLGLLIENTSVE 92 KA+L+DIAI+TG + D+G +ENT +E Sbjct: 286 KAMLEDIAILTGGTVISEDMGYKLENTRLE 315
BLAST of CK740108 vs. ExPASy Swiss-Prot
Match: CH603_BRAJA (60 kDa chaperonin 3 OS=Bradyrhizobium japonicum GN=groL3 PE=1 SV=2) HSP 1 Score: 156.377 bits (394), Expect = 9.887e-42 Identity = 84/172 (48.84%), Postives = 122/172 (70.93%), Query Frame = 2 Query: 110 RKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXKVKDSE-WTTGYNAMTDKYENML 622 +KV I K++TTI+ A K +I+AR+AQ+K ++ ET S YD EKL ER+AKL+GGVAVI+VG ATE E+++RK R++DA +AT AA+EEGIVPGGG AL+ S+ + + + E+ D++ G +IV+KAL PA IA NA KV D+E ++ G++A T +Y N++ Sbjct: 321 KKVMIDKENTTIVNGAGKKADIEARVAQIKAQIEETTSDYDREKLQERLAKLAGGVAVIRVGGATEVEVKERKDRVDDAMHATRAAVEEGIVPGGGVALLRASEQLKGL--RTENDDQKTGVEIVRKALSWPARQIAINAGEDGSIVVGKVLDNEQYSFGFDAQTGEYSNLV 490 HSP 2 Score: 34.2686 bits (77), Expect = 9.887e-42 Identity = 15/29 (51.72%), Postives = 23/29 (79.31%), Query Frame = 3 Query: 3 KALLQDIAIVTGAEFQAGDLGLLIENTSV 89 KA+LQDIAI+TG + + DLG+ +EN ++ Sbjct: 286 KAMLQDIAILTGGQAISEDLGIKLENVTL 314
BLAST of CK740108 vs. ExPASy Swiss-Prot
Match: CH60_STAAR (60 kDa chaperonin OS=Staphylococcus aureus (strain MRSA252) GN=groL PE=3 SV=1) HSP 1 Score: 158.303 bits (399), Expect = 9.888e-42 Identity = 86/170 (50.59%), Postives = 118/170 (69.41%), Query Frame = 2 Query: 113 KVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXKVKDSEWTTGYNAMTDKYENML 622 KV + KD+TT++ ++ I AR++QLK ++ ET+S +D EKL ER+AKL+GGVAVIKVGAA+ETEL++RKLRIEDA N+T AA+EEGIV GGG ALV++ V I+ + D G +IV KAL AP IA NA ++K++E G+NA T+++ NML Sbjct: 320 KVEVTKDNTTVVDGDGDENSIDARVSQLKSQIEETESDFDREKLQERLAKLAGGVAVIKVGAASETELKERKLRIEDALNSTRAAVEEGIVAGGGTALVNVYQKVSEIE---AEGDIETGVNIVLKALTAPVRQIAENAGLEGSVIVERLKNAEPGVGFNAATNEWVNML 486 HSP 2 Score: 32.3426 bits (72), Expect = 9.888e-42 Identity = 13/30 (43.33%), Postives = 24/30 (80.00%), Query Frame = 3 Query: 3 KALLQDIAIVTGAEFQAGDLGLLIENTSVE 92 KA+L+D+AI+TGA+ DLGL +++ +++ Sbjct: 284 KAMLEDLAILTGAQVITDDLGLDLKDATID 313
BLAST of CK740108 vs. ExPASy Swiss-Prot
Match: CH60_GALSU (60 kDa chaperonin, chloroplastic OS=Galdieria sulphuraria GN=groL PE=3 SV=1) HSP 1 Score: 162.925 bits (411), Expect = 1.289e-41 Identity = 86/172 (50.00%), Postives = 123/172 (71.51%), Query Frame = 2 Query: 104 QPRKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXKVKDSEWTTGYNAMTDKYENM 619 Q KV + K+STTII++A +++ ++AR Q++K++ TDS Y+ EKL ER+AKL+GG+AVIKVGAATETE++D+KLR+EDA NAT AAIEEGIVPGGGA LVHL++ + + DE +GA IV+K++ AP I N ++K+ +++ GY+A T K+ NM Sbjct: 319 QANKVIVNKESTTIISNA-NENNVKARCEQIRKQIEITDSSYEKEKLQERLAKLAGGIAVIKVGAATETEMKDKKLRLEDAINATKAAIEEGIVPGGGATLVHLANDLFNWAKGVLKEDELIGALIVEKSITAPLKRIVQNEGKNGAIVVDEIKNLDFSIGYDASTSKFVNM 489 HSP 2 Score: 27.335 bits (59), Expect = 1.289e-41 Identity = 11/29 (37.93%), Postives = 19/29 (65.52%), Query Frame = 3 Query: 3 KALLQDIAIVTGAEFQAGDLGLLIENTSV 89 K++L+DIAI+TG + D GL ++ + Sbjct: 286 KSILEDIAILTGGQLITEDAGLSLDKVDL 314 The following BLAST results are available for this feature:
BLAST of CK740108 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CK740108 ID=CK740108; Name=CK740108; organism=Citrus sinensis; type=EST; length=623bpback to top |