CK740108
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK740108 vs. ExPASy Swiss-Prot
Match: CH60_BACA2 (60 kDa chaperonin OS=Bacillus amyloliquefaciens (strain FZB42) GN=groL PE=3 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 6.304e-41 Identity = 83/170 (48.82%), Postives = 118/170 (69.41%), Query Frame = 2 Query: 113 KVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXKVKDSEWTTGYNAMTDKYENML 622 KV + K++TTI+ A ++I AR+ Q++ ++ ET S +D EKL ER+AKL+GGVAVIKVGAATETEL++RKLRIEDA N+T AA+EEGIV GGG ALV++ + V A++ + D + G +IV +AL P IAHNA ++K+ + G+NA T ++ NM+ Sbjct: 320 KVVVTKENTTIVEGAGDTEKIAARVNQIRAQVEETTSEFDREKLQERLAKLAGGVAVIKVGAATETELKERKLRIEDALNSTRAAVEEGIVSGGGTALVNVYNKVAAVE---AEGDAQTGINIVLRALEEPIRQIAHNAGLEGSVIVERLKNEKIGVGFNAATGEWVNMI 486 HSP 2 Score: 32.7278 bits (73), Expect = 6.304e-41 Identity = 14/31 (45.16%), Postives = 23/31 (74.19%), Query Frame = 3 Query: 3 KALLQDIAIVTGAEFQAGDLGLLIENTSVEQ 95 KA+L+DI+++TG E DLGL +++T + Q Sbjct: 284 KAMLEDISVLTGGEVITEDLGLDLKSTEIGQ 314
BLAST of CK740108 vs. ExPASy Swiss-Prot
Match: CH60_BACP2 (60 kDa chaperonin OS=Bacillus pumilus (strain SAFR-032) GN=groL PE=3 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 6.304e-41 Identity = 83/170 (48.82%), Postives = 117/170 (68.82%), Query Frame = 2 Query: 113 KVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXKVKDSEWTTGYNAMTDKYENML 622 KV + K++TTI+ + +I AR+ Q++ ++ ET S +D EKL ER+AKL+GGVAVIKVGAATETEL++RKLRIEDA N+T AA+EEGIV GGG ALV++ V +I+ D D + G +IV ++L P IAHNA ++K+ E G+NA T+++ NM+ Sbjct: 320 KVVVTKENTTIVEGSGDSAQIAARVNQIRAQVEETTSEFDKEKLQERLAKLAGGVAVIKVGAATETELKERKLRIEDALNSTRAAVEEGIVSGGGTALVNVYKKVASIE---ADGDVQTGVNIVLRSLEEPIRQIAHNAGLEGSVIVERLKNEEIGVGFNAATNEWVNMI 486 HSP 2 Score: 33.113 bits (74), Expect = 6.304e-41 Identity = 14/31 (45.16%), Postives = 23/31 (74.19%), Query Frame = 3 Query: 3 KALLQDIAIVTGAEFQAGDLGLLIENTSVEQ 95 KA+L+DI+++TG E DLGL +++T + Q Sbjct: 284 KAMLEDISVLTGGELITEDLGLDLKSTEIGQ 314
BLAST of CK740108 vs. ExPASy Swiss-Prot
Match: CH602_BRASO (60 kDa chaperonin 2 OS=Bradyrhizobium sp. (strain ORS278) GN=groL2 PE=3 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 6.304e-41 Identity = 82/172 (47.67%), Postives = 120/172 (69.77%), Query Frame = 2 Query: 110 RKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXKVKDSE-WTTGYNAMTDKYENML 622 +KV I K++TTI+ A K +I+AR+AQ+K ++ ET S YD EKL ER+AKL+GGVAVI+VG ATE E+++RK R++DA +AT AA+EEGI+PGGG AL+ S+ + ++ K E D++ G +IV+KAL APA IA NA K+ + E + G+++ + Y NM+ Sbjct: 321 KKVMIDKENTTIVNGAGKKADIEARVAQIKAQIEETTSDYDREKLQERLAKLAGGVAVIRVGGATEVEVKERKDRVDDAMHATRAAVEEGILPGGGVALLRASEQLKGVRTKNE--DQKTGVEIVRKALSAPARQIAINAGEDGSVIVGKILEKEQYAYGFDSQSGDYVNMV 490 HSP 2 Score: 34.2686 bits (77), Expect = 6.304e-41 Identity = 15/29 (51.72%), Postives = 23/29 (79.31%), Query Frame = 3 Query: 3 KALLQDIAIVTGAEFQAGDLGLLIENTSV 89 KA+LQDIAI+TG + + DLG+ +EN ++ Sbjct: 286 KAMLQDIAILTGGQAISEDLGIKLENVNL 314
BLAST of CK740108 vs. ExPASy Swiss-Prot
Match: CH60_RHOCS (60 kDa chaperonin OS=Rhodospirillum centenum (strain ATCC 51521 / SW) GN=groL PE=3 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 6.304e-41 Identity = 87/175 (49.71%), Postives = 118/175 (67.43%), Query Frame = 2 Query: 104 QPRKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLE--DADERLGADIVQKALVAPASLIAHNAXXXXXXXXXK-VKDSEWTTGYNAMTDKYENM 619 Q +KV I KD+TTI+ A SK++IQARI Q+K ++ ET S YD EKL ER+AKL+GGVAVI+VG ATE E+++RK R++DA +AT AA+EEGIV GGG AL++ + + DKL + D++ G DIV+KAL AP IA NA K ++ E G+NA +Y +M Sbjct: 319 QAKKVVITKDNTTIVDGAGSKEDIQARIVQIKAQIEETTSDYDREKLQERLAKLAGGVAVIRVGGATEVEVKERKDRVDDAMHATRAAVEEGIVAGGGVALLYATKAL----DKLTAVNEDQKFGIDIVRKALQAPVRQIAQNAGFDGSVIVGKLLEKGETNFGFNAQAGEYGDM 489 HSP 2 Score: 35.8094 bits (81), Expect = 6.304e-41 Identity = 15/30 (50.00%), Postives = 24/30 (80.00%), Query Frame = 3 Query: 3 KALLQDIAIVTGAEFQAGDLGLLIENTSVE 92 KA+L+D+AI+TG + + DLG+ +EN S+E Sbjct: 286 KAMLEDMAILTGGQVVSEDLGIKLENVSLE 315
BLAST of CK740108 vs. ExPASy Swiss-Prot
Match: CH602_SYNPX (60 kDa chaperonin 2 OS=Synechococcus sp. (strain WH8102) GN=groL2 PE=3 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 8.211e-41 Identity = 92/171 (53.80%), Postives = 122/171 (71.35%), Query Frame = 2 Query: 110 RKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXKVKDSEWTTGYNAMTDKYENML 622 R+VTI K++TTI+A + + R+A +K+EL TDS YD EKL ERIAKL+GGVAVIKVGA TETEL++RKLRIEDA NAT AAIEEGIVPGGG L+ L+D + + ++LE D+R G +I+Q+ALVAP IA NA +++S G+NA+T YE+++ Sbjct: 319 RRVTISKENTTIVATDDHRAAVADRVAAIKRELDATDSDYDREKLNERIAKLAGGVAVIKVGAPTETELKNRKLRIEDALNATRAAIEEGIVPGGGTTLLQLADGLNGLVEQLE-GDQRTGVEILQRALVAPVHHIATNAGHNGDVVIEAMRNS--GQGFNALTGTYEDLM 486 HSP 2 Score: 23.0978 bits (48), Expect = 8.211e-41 Identity = 11/29 (37.93%), Postives = 16/29 (55.17%), Query Frame = 3 Query: 3 KALLQDIAIVTGAEFQAGDLGLLIENTSV 89 KA L DIAI+TG + D L ++ + Sbjct: 284 KAALADIAILTGGTLISEDRALTLDKVQL 312
BLAST of CK740108 vs. ExPASy Swiss-Prot
Match: CH60_HYPNA (60 kDa chaperonin OS=Hyphomonas neptunium (strain ATCC 15444) GN=groL PE=3 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 8.213e-41 Identity = 83/172 (48.26%), Postives = 121/172 (70.35%), Query Frame = 2 Query: 110 RKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXKVKDSEWTT-GYNAMTDKYENML 622 ++V+I KD+TTI+ K EI+AR++Q++K++ +T S YD EKL ER+AKL+GGVAVIKVG ATE E+++RK R++DA NAT AA+EEGIVPGGG AL+ S ++ + L D DE+ G DIV+KAL AP IA NA + +++ + G+NA T++Y +++ Sbjct: 321 KRVSIDKDNTTIVDGGGKKKEIEARVSQIRKQIDDTSSDYDREKLQERLAKLAGGVAVIKVGGATEVEVKERKDRVDDALNATRAAVEEGIVPGGGVALLRSSKNIDVV--GLND-DEKAGIDIVRKALEAPIRQIAENAGVEGSVVVNTILNNKSRSYGFNAQTEEYGDLV 489 HSP 2 Score: 35.039 bits (79), Expect = 8.213e-41 Identity = 14/30 (46.67%), Postives = 23/30 (76.67%), Query Frame = 3 Query: 3 KALLQDIAIVTGAEFQAGDLGLLIENTSVE 92 KA+LQD+A++TG + + DLG+ +EN +E Sbjct: 286 KAMLQDLAVLTGGQVISEDLGIKLENVGME 315
BLAST of CK740108 vs. ExPASy Swiss-Prot
Match: CH60_DESVV (60 kDa chaperonin OS=Desulfovibrio vulgaris subsp. vulgaris (strain DP4) GN=groL PE=3 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 8.213e-41 Identity = 81/171 (47.37%), Postives = 117/171 (68.42%), Query Frame = 2 Query: 110 RKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXKVKDSEWTTGYNAMTDKYENML 622 ++V I K++TTI+ A D+I+AR+ Q++ ++ ET S YD EKL ER+AKL GGVAVI VGAATETE++++K R+EDA NAT AA+EEGIVPGGG ALV ++ + IK D DE G +I+++A+ P IA NA +V++ + G+NA T +YE+++ Sbjct: 321 KRVVIDKENTTIVDGAGKGDDIKARVKQIRAQIEETTSDYDREKLQERLAKLVGGVAVIHVGAATETEMKEKKDRVEDALNATRAAVEEGIVPGGGTALVRVAKVLDDIKP--ADDDETAGVNIIRRAIEEPLRQIASNAGFEGSIVVERVREGKDGFGFNAATGEYEDLI 489 HSP 2 Score: 35.8094 bits (81), Expect = 8.213e-41 Identity = 15/29 (51.72%), Postives = 23/29 (79.31%), Query Frame = 3 Query: 3 KALLQDIAIVTGAEFQAGDLGLLIENTSV 89 KA+LQDIA++TG + + D+G+ +EN SV Sbjct: 286 KAMLQDIAVLTGGQVVSEDMGIKLENISV 314
BLAST of CK740108 vs. ExPASy Swiss-Prot
Match: CH60_DESVH (60 kDa chaperonin OS=Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303) GN=groL PE=3 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 8.213e-41 Identity = 81/171 (47.37%), Postives = 117/171 (68.42%), Query Frame = 2 Query: 110 RKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXKVKDSEWTTGYNAMTDKYENML 622 ++V I K++TTI+ A D+I+AR+ Q++ ++ ET S YD EKL ER+AKL GGVAVI VGAATETE++++K R+EDA NAT AA+EEGIVPGGG ALV ++ + IK D DE G +I+++A+ P IA NA +V++ + G+NA T +YE+++ Sbjct: 321 KRVVIDKENTTIVDGAGKGDDIKARVKQIRAQIEETTSDYDREKLQERLAKLVGGVAVIHVGAATETEMKEKKDRVEDALNATRAAVEEGIVPGGGTALVRVAKVLDDIKP--ADDDETAGVNIIRRAIEEPLRQIASNAGFEGSIVVERVREGKDGFGFNAATGEYEDLI 489 HSP 2 Score: 35.8094 bits (81), Expect = 8.213e-41 Identity = 15/29 (51.72%), Postives = 23/29 (79.31%), Query Frame = 3 Query: 3 KALLQDIAIVTGAEFQAGDLGLLIENTSV 89 KA+LQDIA++TG + + D+G+ +EN SV Sbjct: 286 KAMLQDIAVLTGGQVVSEDMGIKLENISV 314
BLAST of CK740108 vs. ExPASy Swiss-Prot
Match: CH601_NITHX (60 kDa chaperonin 1 OS=Nitrobacter hamburgensis (strain X14 / DSM 10229) GN=groL1 PE=3 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 8.214e-41 Identity = 82/172 (47.67%), Postives = 121/172 (70.35%), Query Frame = 2 Query: 110 RKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXKVKDSE-WTTGYNAMTDKYENML 622 +KV I K++TTI++ A K +I+AR+ Q+K ++ ET S YD EKL ER+AKL+GGVAVI+VG ATE E+++RK R++DA +AT AA+EEGIVPGGG AL+ S+ + I K + D++ G +IV+KAL APA IA NA K+ + E ++ G+++ T +Y N++ Sbjct: 321 KKVMIDKENTTIVSGAGKKADIEARVNQIKAQIEETTSDYDREKLQERLAKLAGGVAVIRVGGATEVEVKERKDRVDDAMHATRAAVEEGIVPGGGVALLRASEQLKRI--KTANDDQKTGVEIVRKALSAPARQIAINAGEDGSIIVGKILEKEQYSYGFDSQTGEYVNLI 490 HSP 2 Score: 34.2686 bits (77), Expect = 8.214e-41 Identity = 15/29 (51.72%), Postives = 23/29 (79.31%), Query Frame = 3 Query: 3 KALLQDIAIVTGAEFQAGDLGLLIENTSV 89 KA+LQDIAI+TG + + DLG+ +EN ++ Sbjct: 286 KAMLQDIAILTGGQAISEDLGIKLENVTL 314
BLAST of CK740108 vs. ExPASy Swiss-Prot
Match: CH602_THEFY (60 kDa chaperonin 2 OS=Thermobifida fusca (strain YX) GN=groL2 PE=3 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 8.215e-41 Identity = 82/171 (47.95%), Postives = 116/171 (67.84%), Query Frame = 2 Query: 110 RKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXKVKDSEWTTGYNAMTDKYENML 622 R++T+ KD+TTI+ A + E+ RI Q++KE+ TDS +D EKL ER+AKL+GGV V++VGAATE EL++RK R+EDA +AT AA+EEGI+ GGG+ALVH + + D DE G IV++ALVAPA IA+NA ++ + E GYNA T +Y +++ Sbjct: 319 RRITVTKDTTTIVDGAGDQSEVNDRINQIRKEIEATDSDWDREKLQERLAKLAGGVCVLRVGAATEVELKERKHRLEDAISATRAAVEEGIIAGGGSALVHAAKTLEG--DLGRTGDEATGVAIVRRALVAPARWIANNAGAEGNVVVSRIAELEPGHGYNAATGEYGDLV 487 HSP 2 Score: 34.6538 bits (78), Expect = 8.215e-41 Identity = 15/30 (50.00%), Postives = 23/30 (76.67%), Query Frame = 3 Query: 3 KALLQDIAIVTGAEFQAGDLGLLIENTSVE 92 KA+LQDIAI+TG + A ++GL +EN ++ Sbjct: 284 KAMLQDIAILTGGQVIAEEVGLTLENAELD 313 The following BLAST results are available for this feature:
BLAST of CK740108 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CK740108 ID=CK740108; Name=CK740108; organism=Citrus sinensis; type=EST; length=623bpback to top |