CK740108
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK740108 vs. ExPASy Swiss-Prot
Match: CH601_BRASB (60 kDa chaperonin 1 OS=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) GN=groL1 PE=3 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 2.769e-38 Identity = 80/172 (46.51%), Postives = 115/172 (66.86%), Query Frame = 2 Query: 110 RKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXKV-KDSEWTTGYNAMTDKYENML 622 +KV I K++TTI+ A K +I+AR+ Q+K ++ ET S YD EKL ER+AKL+GGVAVI+VG ATE E++++K R+EDA NAT AA++EGIVPGGG AL+ V I + ++D + G +IV KAL AP IA NA K+ ++ T G++A ++ Y +M+ Sbjct: 321 KKVVIDKENTTIVNGAGKKADIEARVGQIKAQIEETTSDYDREKLQERLAKLAGGVAVIRVGGATEIEVKEKKDRVEDALNATRAAVQEGIVPGGGVALLRAKKAVGRITN--PNSDVQAGINIVLKALEAPVRQIAENAGVEGSLVVGKILEEKSETFGFDAQSEDYVDMV 490 HSP 2 Score: 35.4242 bits (80), Expect = 2.769e-38 Identity = 14/30 (46.67%), Postives = 24/30 (80.00%), Query Frame = 3 Query: 3 KALLQDIAIVTGAEFQAGDLGLLIENTSVE 92 KA+L+DIAI+TG + + DLG+ +EN +++ Sbjct: 286 KAMLEDIAILTGGQLISDDLGMKLENVTIK 315
BLAST of CK740108 vs. ExPASy Swiss-Prot
Match: CH60_SHEB5 (60 kDa chaperonin OS=Shewanella baltica (strain OS155 / ATCC BAA-1091) GN=groL PE=3 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 2.769e-38 Identity = 79/171 (46.20%), Postives = 114/171 (66.67%), Query Frame = 2 Query: 110 RKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXKVKDSEWTTGYNAMTDKYENML 622 ++V I KD+TTII + +I AR++Q+K+++ E+ S YD EKL ER+AKL+GGVAVIKVGAATE E++++K R+EDA +AT AA+EEG+VPGGG ALV ++ + + ++ + D++ G I +A+ AP IA NA VK+ GYNA D Y +ML Sbjct: 321 KRVVITKDNTTIIDGNGEQTQIAARVSQIKQQVEESTSDYDKEKLQERMAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVPGGGVALVRVASKIAEV--EVLNEDQKHGVVIALRAMEAPLRQIATNAGEEASVVANTVKNGSGNFGYNAGNDTYGDML 489 HSP 2 Score: 31.9574 bits (71), Expect = 2.769e-38 Identity = 14/30 (46.67%), Postives = 22/30 (73.33%), Query Frame = 3 Query: 3 KALLQDIAIVTGAEFQAGDLGLLIENTSVE 92 KA+LQD+AI+TG A ++GL +E ++E Sbjct: 286 KAMLQDVAILTGGTVIAEEIGLELEKATLE 315
BLAST of CK740108 vs. ExPASy Swiss-Prot
Match: CH60_GEOSL (60 kDa chaperonin OS=Geobacter sulfurreducens GN=groL PE=3 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 2.769e-38 Identity = 78/171 (45.61%), Postives = 114/171 (66.67%), Query Frame = 2 Query: 110 RKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXKVKDSEWTTGYNAMTDKYENML 622 +++T+ KD+TTII + +IQ R+ Q++ ++ ET S YD EKL ER+AKL GGVAVIKVGAATETE++++K R+EDA +AT AA++EGIVPGGG A + + A+ E ++ G ++++++L P IA NA KVK+S+ GYNA D+Y +ML Sbjct: 321 KRITVDKDNTTIIDGDGKEADIQGRVKQIRAQIEETTSDYDREKLQERLAKLVGGVAVIKVGAATETEMKEKKARVEDALHATRAAVDEGIVPGGGVAYLRALASLDALSLPTE---QQFGVNVIKRSLEEPIRQIAQNAGVDGSIVVDKVKNSKDAFGYNAAEDEYVDML 488 HSP 2 Score: 31.9574 bits (71), Expect = 2.769e-38 Identity = 13/30 (43.33%), Postives = 24/30 (80.00%), Query Frame = 3 Query: 3 KALLQDIAIVTGAEFQAGDLGLLIENTSVE 92 KA+L+DIAI+TG + + ++G +ENT+++ Sbjct: 286 KAMLEDIAILTGGQVISEEIGNKLENTTMD 315
BLAST of CK740108 vs. ExPASy Swiss-Prot
Match: CH602_CHRVO (60 kDa chaperonin 2 OS=Chromobacterium violaceum GN=groL2 PE=3 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 2.769e-38 Identity = 78/173 (45.09%), Postives = 113/173 (65.32%), Query Frame = 2 Query: 104 QPRKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXKVKDSEWTTGYNAMTDKYENML 622 Q ++V + K++TTII A IQAR+ +++K++ E S YD EKL ER+AKL+GGVAVIKVGAATE E++++K R+EDA +AT AA+EEG+VPGGG AL+ + + K ++A++ G IV +A+ AP I NA KV + + GYNA + +Y +ML Sbjct: 319 QAKRVEVGKENTTIIDGAGEAATIQARVGEIRKQIEEATSDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVPGGGVALLRARATLENL--KTDNAEQEAGVKIVLRAIEAPLRQIVKNAGDEPSVVVNKVLEGKGNFGYNAASGEYGDML 489 HSP 2 Score: 33.113 bits (74), Expect = 2.769e-38 Identity = 14/31 (45.16%), Postives = 23/31 (74.19%), Query Frame = 3 Query: 3 KALLQDIAIVTGAEFQAGDLGLLIENTSVEQ 95 KA+L DIA++TG E A ++GL +E +++Q Sbjct: 286 KAMLTDIAVLTGGEVIAEEVGLTLEKATLDQ 316
BLAST of CK740108 vs. ExPASy Swiss-Prot
Match: CH60_PSEPW (60 kDa chaperonin OS=Pseudomonas putida (strain W619) GN=groL PE=3 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 2.769e-38 Identity = 79/172 (45.93%), Postives = 114/172 (66.28%), Query Frame = 2 Query: 110 RKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKD-KLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXKVKDSEWTTGYNAMTDKYENML 622 ++V + K++TTII A +I+AR+ Q++ ++ ET S YD EKL ER+AKL+GGVAVIKVGA TE E++++K R+EDA +AT AA+EEG+VPGGG ALV + AI D K ++ D+ +G ++++A+ AP I NA KVK GYNA T +Y +M+ Sbjct: 321 KRVILSKENTTIIDGAGVDADIEARVKQIRAQIEETSSDYDREKLQERLAKLAGGVAVIKVGAGTEVEMKEKKARVEDALHATRAAVEEGVVPGGGVALVRA---LAAIVDLKGDNEDQNVGIALLRRAVEAPLRQITANAGDEPSVVADKVKQGSGNYGYNAATGEYGDMI 489 HSP 2 Score: 34.6538 bits (78), Expect = 2.769e-38 Identity = 14/30 (46.67%), Postives = 24/30 (80.00%), Query Frame = 3 Query: 3 KALLQDIAIVTGAEFQAGDLGLLIENTSVE 92 KA+LQDIA++TG + + ++GL +E T++E Sbjct: 286 KAMLQDIAVLTGGQVISEEIGLTLETTTLE 315
BLAST of CK740108 vs. ExPASy Swiss-Prot
Match: CH60_COREQ (60 kDa chaperonin OS=Corynebacterium equii GN=groL PE=3 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 2.769e-38 Identity = 85/171 (49.71%), Postives = 108/171 (63.16%), Query Frame = 2 Query: 110 RKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXKVKDSEWTTGYNAMTDKYENML 622 RKV + KD TTI+ A D I R+ Q++ E+ +DS YD EKL ER+AKL+GGVAVIK GAATE EL++RK RIEDA AA+EEGIV GGG AL+ S P + D + DE GA+IV+ AL AP IA NA KV++ +G NA T +YE++L Sbjct: 319 RKVVVTKDETTIVEGAGDADAIAGRVNQIRAEIEASDSDYDREKLQERLAKLAGGVAVIKAGAATEVELKERKHRIEDAVRNAKAAVEEGIVAGGGVALLQSS---PVLDDLKLEGDEATGANIVKVALEAPLKQIAFNAGLEPGVVAEKVRNLPAGSGLNAATGEYEDLL 486 HSP 2 Score: 30.4166 bits (67), Expect = 2.769e-38 Identity = 14/30 (46.67%), Postives = 20/30 (66.67%), Query Frame = 3 Query: 3 KALLQDIAIVTGAEFQAGDLGLLIENTSVE 92 KA L DIAI+TG E + ++GL +E +E Sbjct: 284 KAQLADIAILTGGEVVSEEVGLSLETAGIE 313
BLAST of CK740108 vs. ExPASy Swiss-Prot
Match: CH601_RENSM (60 kDa chaperonin 1 OS=Renibacterium salmoninarum (strain ATCC 33209 / DSM 20767 / IFO 15589) GN=groL1 PE=3 SV=2) HSP 1 Score: 148.288 bits (373), Expect = 2.769e-38 Identity = 85/173 (49.13%), Postives = 108/173 (62.43%), Query Frame = 2 Query: 104 QPRKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXKVKDSEWTTGYNAMTDKYENML 622 Q RKV + KD TTI+ A ++I R+AQ++ E+ TDS YD EKL ER+AKL+GGVAVIK G+ATE EL++RK RIEDA AA+EEGIVPGGG AL+ V A + + DE GA+IV+ A+ AP IA NA KV+ G NA T YE++L Sbjct: 317 QARKVVVTKDETTIVEGAGDAEQIAGRVAQIRAEIENTDSDYDREKLQERLAKLAGGVAVIKAGSATEVELKERKHRIEDAVRNAKAAVEEGIVPGGGVALIQAG--VKAFETLQLEGDEATGANIVKVAIDAPLKQIAINAGLEPGVVVDKVRGLPVGHGLNAATGVYEDLL 487 HSP 2 Score: 30.8018 bits (68), Expect = 2.769e-38 Identity = 14/30 (46.67%), Postives = 22/30 (73.33%), Query Frame = 3 Query: 3 KALLQDIAIVTGAEFQAGDLGLLIENTSVE 92 KA L DIAI+TG + + ++GL +EN +V+ Sbjct: 284 KAQLADIAILTGGQVISEEVGLSLENATVD 313
BLAST of CK740108 vs. ExPASy Swiss-Prot
Match: CH601_NITWN (60 kDa chaperonin 1 OS=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) GN=groL1 PE=3 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 2.769e-38 Identity = 77/172 (44.77%), Postives = 118/172 (68.60%), Query Frame = 2 Query: 110 RKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXK-VKDSEWTTGYNAMTDKYENML 622 +KV I K++TTI+ A K +I+AR+ Q+K ++ ET S YD EKL ER+AKL+GGVAVI+VG ATE E+++RK R++DA +AT AA+EEGI+PGGG AL+ + A+K ++ D++ G DIV++A+ PA I NA K ++ + + G+NA T +Y++++ Sbjct: 321 KKVVIDKENTTIVDGAGRKKDIEARVTQIKAQIEETTSDYDREKLQERLAKLAGGVAVIRVGGATEVEVKERKDRVDDAMHATRAAVEEGILPGGGVALLRALKALDAVKP--DNPDQKAGVDIVRRAIQVPARQIIQNAGEDGSLVVGKLLEKNTYNWGFNAATGEYQDLV 490 HSP 2 Score: 31.9574 bits (71), Expect = 2.769e-38 Identity = 14/29 (48.28%), Postives = 22/29 (75.86%), Query Frame = 3 Query: 3 KALLQDIAIVTGAEFQAGDLGLLIENTSV 89 KA+L+DIAI+TG + DLG+ +EN ++ Sbjct: 286 KAMLEDIAILTGGTAISEDLGIKLENVTL 314
BLAST of CK740108 vs. ExPASy Swiss-Prot
Match: CH60_THELT (60 kDa chaperonin OS=Thermotoga lettingae (strain ATCC BAA-301 / DSM 14385 / TMO) GN=groL PE=3 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 2.769e-38 Identity = 84/169 (49.70%), Postives = 113/169 (66.86%), Query Frame = 2 Query: 116 VTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXKVKDS-EWTTGYNAMTDKYENM 619 V ++KD T II + +EI+ RIAQ+K ++ +T S Y+ E L ER+AKL+GGVAVIKVGAATETEL+++K RIEDA +AT AA+EEGIVPGGG L+ V + +L D DE++GA IV KAL AP IA NA K+ S E + G++A+ +Y +M Sbjct: 321 VRVKKDDTIIIGGKGNPEEIKKRIAQIKSQIEQTTSEYEKETLQERMAKLAGGVAVIKVGAATETELKEKKHRIEDALSATRAAVEEGIVPGGGVTLIRSRKAVEDVLKEL-DGDEKVGAMIVYKALEAPIRQIAENAGYDGAVIIEKILASKEESYGFDALKGEYTDM 488 HSP 2 Score: 32.7278 bits (73), Expect = 2.769e-38 Identity = 14/30 (46.67%), Postives = 23/30 (76.67%), Query Frame = 3 Query: 3 KALLQDIAIVTGAEFQAGDLGLLIENTSVE 92 KA+LQDIAI+TG + +LG+ +E+ ++E Sbjct: 284 KAMLQDIAILTGGTVISDELGINLEDVAIE 313
BLAST of CK740108 vs. ExPASy Swiss-Prot
Match: CH60_THESQ (60 kDa chaperonin OS=Thermotoga sp. (strain RQ2) GN=groL PE=3 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 2.769e-38 Identity = 83/169 (49.11%), Postives = 111/169 (65.68%), Query Frame = 2 Query: 116 VTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXKV-KDSEWTTGYNAMTDKYENM 619 V ++KD T II + I+ RIAQ+K ++ ET S Y+ E L ER+AKL+GGVAVIKVGAATETEL+++K RIEDA +AT AA+EEGIVPGGG L+ V + ++LE DE++GA IV KAL AP IA NA K+ + + G++A+ +Y NM Sbjct: 321 VRVKKDETIIIGGKGDPEAIKKRIAQIKAQIEETTSEYEKETLQERMAKLAGGVAVIKVGAATETELKEKKHRIEDALSATRAAVEEGIVPGGGVTLLRARKAVEKVIEELE-GDEKIGAQIVYKALSAPIKQIAENAGYDGAVIIEKILSNDDPAYGFDALRGEYCNM 488 HSP 2 Score: 33.113 bits (74), Expect = 2.769e-38 Identity = 14/30 (46.67%), Postives = 24/30 (80.00%), Query Frame = 3 Query: 3 KALLQDIAIVTGAEFQAGDLGLLIENTSVE 92 KA+LQDIAI+TG + + +LG+ +E+ ++E Sbjct: 284 KAMLQDIAILTGGQVASEELGINLEDLTLE 313 The following BLAST results are available for this feature:
BLAST of CK740108 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CK740108 ID=CK740108; Name=CK740108; organism=Citrus sinensis; type=EST; length=623bpback to top |