CK740108
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK740108 vs. ExPASy Swiss-Prot
Match: CH60_ENTS8 (60 kDa chaperonin OS=Enterobacter sakazakii (strain ATCC BAA-894) GN=groL PE=3 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 7.975e-38 Identity = 77/173 (44.51%), Postives = 111/173 (64.16%), Query Frame = 2 Query: 104 QPRKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXKVKDSEWTTGYNAMTDKYENML 622 Q ++V I KD+TTII + IQ R+ Q+++++ E S YD EKL ER+AKL+GGVAVIKVGAATE E++++K R+EDA +AT AA+EEG+V GGG ALV ++ + + + E D+ +G + +A+ AP I NA VK + GYNA T++Y NM+ Sbjct: 319 QAKRVVINKDTTTIIDGVGDESAIQGRVGQIRQQIEEATSDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALVRVAAKLTELTGQNE--DQNVGIKVALRAMEAPLRQIVSNAGEEPSVVANNVKAGDGNYGYNAATEEYGNMI 489 HSP 2 Score: 30.4166 bits (67), Expect = 7.975e-38 Identity = 13/30 (43.33%), Postives = 22/30 (73.33%), Query Frame = 3 Query: 3 KALLQDIAIVTGAEFQAGDLGLLIENTSVE 92 KA+LQDIAI+TG + ++G+ +E ++E Sbjct: 286 KAMLQDIAILTGGTVISEEIGMELEKATLE 315
BLAST of CK740108 vs. ExPASy Swiss-Prot
Match: CH60_PSEAE (60 kDa chaperonin OS=Pseudomonas aeruginosa GN=groL PE=1 SV=3) HSP 1 Score: 146.362 bits (368), Expect = 7.975e-38 Identity = 76/171 (44.44%), Postives = 114/171 (66.67%), Query Frame = 2 Query: 110 RKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXKVKDSEWTTGYNAMTDKYENML 622 ++V I K++TTII A + +I+AR+ Q++K++ ET S YD EKL ER+AKL+GGVAVIKVGAATE E++++K R+EDA +AT AA+EEG+VPGGG ALV + +K ++ ++ +G ++++A+ +P I NA KVK G+NA T Y +M+ Sbjct: 321 KRVVINKENTTIIDGAGVQADIEARVLQIRKQIEETTSDYDREKLQERLAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVPGGGVALVRALQAIEGLKG--DNEEQNVGIALLRRAVESPLRQIVANAGDEPSVVVDKVKQGSGNYGFNAATGVYGDMI 489 HSP 2 Score: 31.187 bits (69), Expect = 7.975e-38 Identity = 14/30 (46.67%), Postives = 22/30 (73.33%), Query Frame = 3 Query: 3 KALLQDIAIVTGAEFQAGDLGLLIENTSVE 92 KA+LQDIAI+TG + ++GL +E ++E Sbjct: 286 KAMLQDIAILTGGTVISEEVGLSLEGATLE 315
BLAST of CK740108 vs. ExPASy Swiss-Prot
Match: CH60_PSEAB (60 kDa chaperonin OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=groL PE=3 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 7.975e-38 Identity = 76/171 (44.44%), Postives = 114/171 (66.67%), Query Frame = 2 Query: 110 RKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXKVKDSEWTTGYNAMTDKYENML 622 ++V I K++TTII A + +I+AR+ Q++K++ ET S YD EKL ER+AKL+GGVAVIKVGAATE E++++K R+EDA +AT AA+EEG+VPGGG ALV + +K ++ ++ +G ++++A+ +P I NA KVK G+NA T Y +M+ Sbjct: 321 KRVVINKENTTIIDGAGVQADIEARVLQIRKQIEETTSDYDREKLQERLAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVPGGGVALVRALQAIEGLKG--DNEEQNVGIALLRRAVESPLRQIVANAGDEPSVVVDKVKQGSGNYGFNAATGVYGDMI 489 HSP 2 Score: 31.187 bits (69), Expect = 7.975e-38 Identity = 14/30 (46.67%), Postives = 22/30 (73.33%), Query Frame = 3 Query: 3 KALLQDIAIVTGAEFQAGDLGLLIENTSVE 92 KA+LQDIAI+TG + ++GL +E ++E Sbjct: 286 KAMLQDIAILTGGTVISEEVGLSLEGATLE 315
BLAST of CK740108 vs. ExPASy Swiss-Prot
Match: CH60_PSEA8 (60 kDa chaperonin OS=Pseudomonas aeruginosa (strain LESB58) GN=groL PE=3 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 7.975e-38 Identity = 76/171 (44.44%), Postives = 114/171 (66.67%), Query Frame = 2 Query: 110 RKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXKVKDSEWTTGYNAMTDKYENML 622 ++V I K++TTII A + +I+AR+ Q++K++ ET S YD EKL ER+AKL+GGVAVIKVGAATE E++++K R+EDA +AT AA+EEG+VPGGG ALV + +K ++ ++ +G ++++A+ +P I NA KVK G+NA T Y +M+ Sbjct: 321 KRVVINKENTTIIDGAGVQADIEARVLQIRKQIEETTSDYDREKLQERLAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVPGGGVALVRALQAIEGLKG--DNEEQNVGIALLRRAVESPLRQIVANAGDEPSVVVDKVKQGSGNYGFNAATGVYGDMI 489 HSP 2 Score: 31.187 bits (69), Expect = 7.975e-38 Identity = 14/30 (46.67%), Postives = 22/30 (73.33%), Query Frame = 3 Query: 3 KALLQDIAIVTGAEFQAGDLGLLIENTSVE 92 KA+LQDIAI+TG + ++GL +E ++E Sbjct: 286 KAMLQDIAILTGGTVISEEVGLSLEGATLE 315
BLAST of CK740108 vs. ExPASy Swiss-Prot
Match: CH60_BEII9 (60 kDa chaperonin OS=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) GN=groL PE=3 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 7.975e-38 Identity = 76/173 (43.93%), Postives = 122/173 (70.52%), Query Frame = 2 Query: 110 RKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKD-KLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXKVKDS-EWTTGYNAMTDKYENML 622 +++ I K++TTII A +KD+I+ RI+Q+K ++AET S YD EK+ ER+AKL+GGVAV++VG +TE E++++K R++DA NAT AA+EEG+ PGGG AL+ + A+++ +++D++ G +IV+KA+ PA I N+ K+ +S E+ GYNA T +Y +M+ Sbjct: 321 KRIRIDKEATTIIDGAGNKDDIEGRISQIKAQIAETTSDYDREKMQERLAKLAGGVAVLRVGGSTEVEVKEKKDRVDDALNATRAAVEEGVSPGGGVALLRA---IKALENLPTDNSDQKAGIEIVRKAIQTPAKQIVDNSGGDGAVVVGKLLESNEYAFGYNAQTGEYGDMV 490 HSP 2 Score: 31.187 bits (69), Expect = 7.975e-38 Identity = 13/29 (44.83%), Postives = 22/29 (75.86%), Query Frame = 3 Query: 3 KALLQDIAIVTGAEFQAGDLGLLIENTSV 89 KA+L+DIAI+TG + +LG+ +EN ++ Sbjct: 286 KAMLEDIAILTGGTLISEELGIKLENVTL 314
BLAST of CK740108 vs. ExPASy Swiss-Prot
Match: CH60_ACICJ (60 kDa chaperonin OS=Acidiphilium cryptum (strain JF-5) GN=groL PE=3 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 7.975e-38 Identity = 79/172 (45.93%), Postives = 119/172 (69.19%), Query Frame = 2 Query: 110 RKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXKVKDS-EWTTGYNAMTDKYENML 622 +KV I K++TTI+ A K +I R Q++ ++ ET S YD EKL ER+AKL+GGVAVI+VG A+ETE+++RK R++DA +AT AA+EEGIVPGGG AL S + K K ++ D+R G DI++KA++AP IA NA KV D+ +++ G++A + ++++M+ Sbjct: 321 KKVLIEKENTTIVEGAGKKADITGRCNQIRAQIEETTSDYDREKLQERLAKLAGGVAVIRVGGASETEVKERKDRVDDALHATRAAVEEGIVPGGGVALARAS--LAINKLKADNDDQRFGIDIIRKAVLAPMRQIAENAGEDGAVISGKVLDNDDYSFGFDAQSGEFKDMV 490 HSP 2 Score: 31.187 bits (69), Expect = 7.975e-38 Identity = 13/29 (44.83%), Postives = 22/29 (75.86%), Query Frame = 3 Query: 3 KALLQDIAIVTGAEFQAGDLGLLIENTSV 89 KA+L+DIAI+TG + + DLG+ +E ++ Sbjct: 286 KAMLEDIAILTGGQVISEDLGIKLETVTL 314
BLAST of CK740108 vs. ExPASy Swiss-Prot
Match: CH60_METPB (60 kDa chaperonin OS=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) GN=groL PE=3 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 7.975e-38 Identity = 82/173 (47.40%), Postives = 113/173 (65.32%), Query Frame = 2 Query: 110 RKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXKVKDS--EWTTGYNAMTDKYENML 622 ++V I K++TTII K +I+AR+ Q+K ++ ET S YD EKL ER+AKL+GGVAVI+VG ATE E++++K R++DA NAT AA+EEGIVPGGG AL+ V +K + D + G IV KAL AP IA NA K+ D+ T G+NA T++Y +M+ Sbjct: 321 KRVRIEKENTTIIDGLGEKADIEARVGQIKAQIEETTSDYDREKLQERLAKLAGGVAVIRVGGATEVEVKEKKDRVDDALNATRAAVEEGIVPGGGTALLRAKKAVAELKSDVPDV--QAGIKIVLKALEAPIRQIAQNAGVEGSIVVGKITDNTGSETYGFNAQTEEYVDMI 491 HSP 2 Score: 30.0314 bits (66), Expect = 7.975e-38 Identity = 13/29 (44.83%), Postives = 22/29 (75.86%), Query Frame = 3 Query: 3 KALLQDIAIVTGAEFQAGDLGLLIENTSV 89 KA+L+DIAI+T + + DLG+ +EN ++ Sbjct: 286 KAMLEDIAILTKGQTISEDLGIKLENVAL 314
BLAST of CK740108 vs. ExPASy Swiss-Prot
Match: CH603_RHIL3 (60 kDa chaperonin 3 OS=Rhizobium leguminosarum bv. viciae (strain 3841) GN=groL3 PE=3 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 7.976e-38 Identity = 81/173 (46.82%), Postives = 125/173 (72.25%), Query Frame = 2 Query: 110 RKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDA--DERLGADIVQKALVAPASLIAHNAXXXXXXXXXKVKD-SEWTTGYNAMTDKYENM 619 +KV+I K++TTI+ + +K +I+ R+AQ++ ++ ET S YD EKL ER+AKL+GGVAVI+VG +TE E++++K R++DA +AT AA+EEGI+PGGG AL+ V A+ D +E A D+R+G DIV++A+ APA IA NA K+++ SE++ G+NA T +Y ++ Sbjct: 321 KKVSIEKENTTIVDGSGAKSDIEGRVAQIRAQIEETTSDYDREKLQERLAKLAGGVAVIRVGGSTEVEVKEKKDRVDDALHATRAAVEEGILPGGGVALLRA---VKAL-DNVETANGDQRVGVDIVRRAVEAPARQIAENAGAEGSVIVGKLREKSEFSYGWNAQTGEYGDL 489 HSP 2 Score: 28.8758 bits (63), Expect = 7.976e-38 Identity = 12/30 (40.00%), Postives = 22/30 (73.33%), Query Frame = 3 Query: 3 KALLQDIAIVTGAEFQAGDLGLLIENTSVE 92 KA+L+DIAI+T + DLG+ +E+ +++ Sbjct: 286 KAMLEDIAILTAGTVISEDLGIKLESVTLD 315
BLAST of CK740108 vs. ExPASy Swiss-Prot
Match: CH602_RHIEC (60 kDa chaperonin 2 OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=groL2 PE=3 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 7.976e-38 Identity = 79/171 (46.20%), Postives = 119/171 (69.59%), Query Frame = 2 Query: 110 RKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXKVKD-SEWTTGYNAMTDKYENM 619 +KV I K++TTII A SK E+ R AQ++ ++ ET S YD EKL ER+AKL+GGVAVI+VG +TE E++++K R++DA +AT AA+EEGI+PGGG AL+ + +I K + D+R+G DIV++A+ AP IA NA K+++ S+++ G+NA T +Y ++ Sbjct: 321 KKVAIEKENTTIIDGAGSKAELDGRTAQIRAQIEETTSDYDREKLQERLAKLAGGVAVIRVGGSTEVEVKEKKDRVDDALHATRAAVEEGILPGGGVALLRAVKALDSI--KTANDDQRVGVDIVRRAIEAPVRQIAENAGAEGSIIVGKLREKSDFSYGWNAQTGEYGDL 489 HSP 2 Score: 30.0314 bits (66), Expect = 7.976e-38 Identity = 13/29 (44.83%), Postives = 21/29 (72.41%), Query Frame = 3 Query: 3 KALLQDIAIVTGAEFQAGDLGLLIENTSV 89 KA+L+DIAI+T + DLG+ +EN ++ Sbjct: 286 KAMLEDIAILTAGTVISEDLGIKLENVTL 314
BLAST of CK740108 vs. ExPASy Swiss-Prot
Match: CH60_PANAN (60 kDa chaperonin (Fragment) OS=Pantoea ananas GN=groL PE=3 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 7.976e-38 Identity = 75/173 (43.35%), Postives = 112/173 (64.74%), Query Frame = 2 Query: 104 QPRKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXKVKDSEWTTGYNAMTDKYENML 622 Q ++V I KD+TTII + IQ R+ Q+++++ E S YD EKL ER+AKL+GGVAV+KVGAATE E++++K R+EDA +AT AA+EEG+V GGG ALV ++ + ++ + E D+ +G + +A+ +P I NA VK + GYNA T++Y NM+ Sbjct: 319 QAKRVVINKDTTTIIDGVGEETTIQGRVTQIRQQIEEATSDYDKEKLQERVAKLAGGVAVLKVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALVRVAAQLTELRGQNE--DQNVGIKVALRAMESPLRQIVSNAGEEPSVVANNVKAGDGNYGYNAQTEEYGNMI 489 HSP 2 Score: 30.4166 bits (67), Expect = 7.976e-38 Identity = 13/30 (43.33%), Postives = 22/30 (73.33%), Query Frame = 3 Query: 3 KALLQDIAIVTGAEFQAGDLGLLIENTSVE 92 KA+LQDIAI+TG + ++G+ +E ++E Sbjct: 286 KAMLQDIAILTGGTVISEEIGMELEKAALE 315 The following BLAST results are available for this feature:
BLAST of CK740108 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CK740108 ID=CK740108; Name=CK740108; organism=Citrus sinensis; type=EST; length=623bpback to top |