CK740113 | Citrus Genome Database

Overview


Name	CK740113
Unique Name	CK740113
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	667

Libraries


Library Name	Type
Ridge pineapple sweet orange entire seedling	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Alignments

Feature Name	Type	Location	Analysis
Csv1_Contig4158	contig	Csv1_Contig4158:224..892.	BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1

Homology

[Close]

BLAST of CK740113 vs. ExPASy Swiss-Prot
Match: ANXA6_HUMAN (Annexin A6 OS=Homo sapiens GN=ANXA6 PE=1 SV=3)

HSP 1 Score: 80.4925 bits (197), Expect = 8.758e-15
Identity = 41/122 (33.61%), Postives = 70/122 (57.38%), Query Frame = 2

Query:    2 RNAAQRKLIRQTYADTYGEDLLKSLDKELTNDFERVVMLWTLDPAERDAFLANEATKRWTSSNQVLMEIACTRSSKQLLEARQAYHARFKKSLEEDVGYHTNGDFRKLLLPLVTAYRYEGDE 367
            R+  QR+ IRQT+   +G DL+  L  E++ D  R+++   + PA  DA    +A +   +  + L+EI  TR++ ++    +AY   + KSLE+ +   T+G FR++L+ L T +R EG E
Sbjct:  393 RSNVQRQQIRQTFKSHFGRDLMTDLKSEISGDLARLILGLMMPPAHYDAKQLKKAMEGAGTDEKALIEILATRTNAEIRAINEAYKEDYHKSLEDALSSDTSGHFRRILISLATGHREEGGE 514

HSP 2 Score: 72.7886 bits (177), Expect = 2.372e-13
Identity = 43/133 (32.33%), Postives = 74/133 (55.64%), Query Frame = 2

Query:    2 RNAAQRKLIRQTYADTYGEDLLKSLDKELTNDFERVVMLWTLDPAERDAFLANEATKRWTSSNQVLMEIACTRSSKQLLEARQAYHARFKKSLEEDVGYHTNGDFRKLLLPLVTAYRYEGDEVNITLANQKLR 400
            R+  QR+ + Q+Y   YG+DL+  L  ELT  FER+++     PA  DA    +A     +  + L+EI  +R+++Q+ +   AY   +++ LE D+   T+G F+K+L+ L+   R E D V+  L  Q ++
Sbjct:   50 RSNRQRQEVCQSYKSLYGKDLIADLKYELTGKFERLIVGLMRPPAYCDAKEIKDAISGIGTDEKCLIEILASRTNEQMHQLVAAYKDAYERDLEADIIGDTSGHFQKMLVVLLQGTREEDDVVSEDLVQQDVQ 182

HSP 3 Score: 22.3274 bits (46), Expect = 2.372e-13
Identity = 14/58 (24.14%), Postives = 27/58 (46.55%), Query Frame = 3

Query:  456 LGYRSKHRSMRL*INTRMYMGNDIDQDLEADPKDEYLDLLRATVQCLVR-PEHYFEKI 626
            LG RSK     +        G  I+  +  +   ++  L+ A V+C+   PE++ E++
Sbjct:  203 LGNRSKQHLRLVFDEYLKTTGKPIEASIRGELSGDFEKLMLAVVKCIRSTPEYFAERL 260

[Close]

BLAST of CK740113 vs. ExPASy Swiss-Prot
Match: ANXA6_BOVIN (Annexin A6 OS=Bos taurus GN=ANXA6 PE=1 SV=2)

HSP 1 Score: 79.7221 bits (195), Expect = 1.494e-14
Identity = 42/122 (34.43%), Postives = 70/122 (57.38%), Query Frame = 2

Query:    2 RNAAQRKLIRQTYADTYGEDLLKSLDKELTNDFERVVMLWTLDPAERDAFLANEATKRWTSSNQVLMEIACTRSSKQLLEARQAYHARFKKSLEEDVGYHTNGDFRKLLLPLVTAYRYEGDE 367
            R+ AQR+ IRQT+   +G DL+  L  EL+ D  R+++   + PA  DA    +A +   +  + L+EI  TR++ ++    +AY   + KSLE+ +   T+G F+++L+ L T  R EG E
Sbjct:  393 RSNAQRQQIRQTFKSHFGRDLMADLKSELSGDLARLILGLMMPPAHYDAKQLKKAMEGAGTDEKALIEILATRTNAEIQAINKAYKEDYHKSLEDALSSDTSGHFKRILISLATGNREEGGE 514

HSP 2 Score: 75.8702 bits (185), Expect = 2.927e-14
Identity = 45/133 (33.83%), Postives = 73/133 (54.89%), Query Frame = 2

Query:    2 RNAAQRKLIRQTYADTYGEDLLKSLDKELTNDFERVVMLWTLDPAERDAFLANEATKRWTSSNQVLMEIACTRSSKQLLEARQAYHARFKKSLEEDVGYHTNGDFRKLLLPLVTAYRYEGDEVNITLANQKLR 400
            R+  QR+ I Q Y   YG+DL+  L  ELT  FER+++     PA  DA    +A     +  + L+EI  +R+++Q+ +   AY   +++ LE D+   T+G FRK+L+ L+   R E D V+  L  Q ++
Sbjct:   50 RSNRQRQEICQNYKSLYGKDLIADLKYELTGKFERLIVGLMRPPAYADAKEIKDAISGIGTDEKCLIEILASRTNEQIHQLVAAYKDAYERDLEADITGDTSGHFRKMLVVLLQGTREEDDVVSEDLVQQDVQ 182

HSP 3 Score: 22.3274 bits (46), Expect = 2.927e-14
Identity = 14/58 (24.14%), Postives = 24/58 (41.38%), Query Frame = 3

Query:  456 LGYRSKHRSMRL*INTRMYMGNDIDQDLEADPKDEYLDLLRATVQCLVRPEHYFEKIL 629
            LG RSK     +        G  I+  +  +   ++  L+ A V+C+     YF + L
Sbjct:  203 LGNRSKQHLRLVFDEYLKTTGKPIEASIRGELSGDFEKLMLAVVKCIRSTAEYFAERL 260

[Close]

BLAST of CK740113 vs. ExPASy Swiss-Prot
Match: ANXA7_BOVIN (Annexin A7 OS=Bos taurus GN=ANXA7 PE=1 SV=2)

HSP 1 Score: 78.9518 bits (193), Expect = 2.548e-14
Identity = 41/130 (31.54%), Postives = 72/130 (55.38%), Query Frame = 2

Query:    2 RNAAQRKLIRQTYADTYGEDLLKSLDKELTNDFERVVMLWTLDPAERDAFLANEATKRWTSSNQVLMEIACTRSSKQLLEARQAYHARFKKSLEEDVGYHTNGDFRKLLLPLVTAYRYEGDEVNITLANQ 391
            R+  QR+ I+  +   YG+DL+K L  EL+ + E +++   +     DA+    A K   +  +VL+EI CTR+++++ E  + Y + F + LE+D+   T+G F +LL+ +    R E   VN  LA +
Sbjct:  190 RSNDQRQKIKAAFKTMYGKDLIKDLKSELSGNMEELILALFMPSTYYDAWSLRNAMKGAGTQERVLIEILCTRTNQEIREIVRCYQSEFGRDLEKDIRSDTSGHFERLLVSMCQGNRDENQNVNHQLAQE 319

[Close]

BLAST of CK740113 vs. ExPASy Swiss-Prot
Match: ANX11_MOUSE (Annexin A11 OS=Mus musculus GN=Anxa11 PE=1 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 4.346e-14
Identity = 47/174 (27.01%), Postives = 91/174 (52.30%), Query Frame = 2

Query:    2 RNAAQRKLIRQTYADTYGEDLLKSLDKELTNDFERVVMLWTLDPAERDAFLANEATKRWTSSNQVLMEIACTRSSKQLLEARQAYHARFKKSLEEDVGYHTNGDFRKLLLPLVTAYRYEGDEVNITLANQKLR--FSMRRFLIRLTMMRISSGSWLQEQAQINATLNQYKNVYG 517
            R+  QR+ I  ++   YG+DL+K L  EL+ +FE+ ++     P   D +   EA K   +    L+EI  +RS++ + E  +AY   F+K+LEE +   T+G F++LL+ L    R E   V+++L  + ++  ++     +     + ++    + +A + A  N+Y+ + G
Sbjct:  228 RSNKQRQQILLSFKTAYGKDLIKDLKSELSGNFEKTILALMKTPVLFDVYEIKEAIKGAGTDEACLIEIFASRSNEHIRELSRAYKTEFQKTLEEAIRSDTSGHFQRLLISLSQGNRDESTNVDMSLVQRDVQELYAAGENRLGTDESKFNAILCSRSRAHLVAVFNEYQRMTG 401

[Close]

BLAST of CK740113 vs. ExPASy Swiss-Prot
Match: ANXA1_RABIT (Annexin A1 OS=Oryctolagus cuniculus GN=ANXA1 PE=1 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 5.026e-14
Identity = 47/133 (35.34%), Postives = 67/133 (50.38%), Query Frame = 2

Query:    2 RNAAQRKLIRQTYADTYGEDLLKSLDKELTNDFERVVMLWTLDPAERDAFLANEATKRWTSSNQVLMEIACTRSSKQLLEARQAYHARFKKSLEEDVGYHTNGDFRKLLLPLVTAYRYEGDEVNITLANQKLR 400
            RN AQR+ I+  Y    G+ L + L K LT   E VV+     PA+ DA     A K   +    L+EI  +R++K++ E  + Y    K+ L +D+   T+GDF+K LL L    R E   VN  LA+   R
Sbjct:   72 RNNAQRQQIKAAYLQEKGKPLDEVLKKALTGHLEEVVLALLKTPAQFDADELRAAMKGLGTDEDTLIEILASRNNKEIREINRVYREELKRDLAKDIASDTSGDFQKALLSLAKGDRSEDFGVNEDLADTDAR 204

HSP 2 Score: 21.9422 bits (45), Expect = 5.026e-14
Identity = 12/40 (30.00%), Postives = 20/40 (50.00%), Query Frame = 3

Query:  510 YMGNDIDQDLEADPKDEYLDLLRATVQCLVRPEHYFEKIL 629
            Y  +D+++ L+ + K +    L A VQC      YF + L
Sbjct:  243 YSQHDMNKVLDLELKGDIEKCLTAIVQCATCKPAYFAEKL 282

[Close]

BLAST of CK740113 vs. ExPASy Swiss-Prot
Match: ANXA6_RAT (Annexin A6 OS=Rattus norvegicus GN=Anxa6 PE=1 SV=2)

HSP 1 Score: 77.7962 bits (190), Expect = 5.677e-14
Identity = 40/122 (32.79%), Postives = 69/122 (56.56%), Query Frame = 2

Query:    2 RNAAQRKLIRQTYADTYGEDLLKSLDKELTNDFERVVMLWTLDPAERDAFLANEATKRWTSSNQVLMEIACTRSSKQLLEARQAYHARFKKSLEEDVGYHTNGDFRKLLLPLVTAYRYEGDE 367
            R+  QR+ IRQT+   +G DL+  L  E++ D  R+++   + PA  DA    +A +   +  + L+EI  TR++ ++    +AY   + KSLE+ +   T+G F+++L+ L T  R EG E
Sbjct:  393 RSNVQRQQIRQTFKSHFGRDLMADLKSEISGDLARLILGLMMPPAHYDAKQLKKAMEGAGTDEKALIEILATRTNAEIRAINEAYKEDYHKSLEDALSSDTSGHFKRILISLATGNREEGGE 514

HSP 2 Score: 68.1662 bits (165), Expect = 5.454e-12
Identity = 42/133 (31.58%), Postives = 72/133 (54.14%), Query Frame = 2

Query:    2 RNAAQRKLIRQTYADTYGEDLLKSLDKELTNDFERVVMLWTLDPAERDAFLANEATKRWTSSNQVLMEIACTRSSKQLLEARQAYHARFKKSLEEDVGYHTNGDFRKLLLPLVTAYRYEGDEVNITLANQKLR 400
            R+  QR+ I Q+Y   YG+DL+  L  ELT  FER+++      A  DA    +A     +  + L+EI  +R+++Q+ +   AY   +++ LE D+   T+G F+K+L+ L+   R   D V+  L  Q ++
Sbjct:   50 RSNKQRQEICQSYKSLYGKDLIADLKYELTGKFERLIVNLMRPLAYCDAKEIKDAISGIGTDEKCLIEILASRTNEQIHQLVAAYKDAYERDLESDIIGDTSGHFQKMLVVLLQGTRENDDVVSEDLVQQDVQ 182

HSP 3 Score: 22.3274 bits (46), Expect = 5.454e-12
Identity = 14/58 (24.14%), Postives = 27/58 (46.55%), Query Frame = 3

Query:  456 LGYRSKHRSMRL*INTRMYMGNDIDQDLEADPKDEYLDLLRATVQCLVR-PEHYFEKI 626
            LG RSK     +        G  I+  +  +   ++  L+ A V+C+   PE++ E++
Sbjct:  203 LGNRSKQHLRLVFDEYLKTTGKPIEASIRGELSGDFEKLMLAVVKCIRSTPEYFAERL 260

[Close]

BLAST of CK740113 vs. ExPASy Swiss-Prot
Match: ANXA3_BOVIN (Annexin A3 OS=Bos taurus GN=ANXA3 PE=2 SV=3)

HSP 1 Score: 76.6406 bits (187), Expect = 1.265e-13
Identity = 46/130 (35.38%), Postives = 71/130 (54.62%), Query Frame = 2

Query:    2 RNAAQRKLIRQTYADTYGEDLLKSLDKELTNDFERVVMLWTLDPAERDAFLANEATKRWTSSNQVLMEIACTRSSKQLLEARQAYHARFKKSLEEDVGYHTNGDFRKLLLPLVTAYRYEGDEVNITLANQ 391
            R  AQR LI + Y    G++L   L  +L+  F+ +++     PA  DA    ++ K   ++   L+EI  TR+SKQ+ E   AY+  +KKSL +++   T+GDFRK LL L    R E  +V+  LA +
Sbjct:   48 RTNAQRLLIAKEYQALCGKELKDDLKGDLSGHFKHLMVALVTPPAVFDAKQLKKSMKGMGTNEDALIEILTTRTSKQMQEIGHAYYTAYKKSLGDEISSETSGDFRKALLILANGRRDESLKVDEQLARK 177

[Close]

BLAST of CK740113 vs. ExPASy Swiss-Prot
Match: ANXA6_CHICK (Annexin A6 OS=Gallus gallus GN=ANXA6 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.406e-13
Identity = 44/130 (33.85%), Postives = 70/130 (53.85%), Query Frame = 2

Query:    2 RNAAQRKLIRQTYADTYGEDLLKSLDKELTNDFERVVMLWTLDPAERDAFLANEATKRWTSSNQVLMEIACTRSSKQLLEARQAYHARFKKSLEEDVGYHTNGDFRKLLLPLVTAYRYEGDEVNITLANQ 391
            R+  QR  I Q Y   YG+DL+  L  ELT  FER+++     PA  DA    +A     +  + L+EI  +R+++++ +   AY   +++ LE DV   T+G F+K+L+ L+   R E D V+  L  Q
Sbjct:   48 RSNKQRLEICQAYKSQYGKDLIADLKYELTGKFERLIVSLMRPPAYSDAKEIKDAIAGIGTDEKCLIEILASRTNQEIHDLVAAYKDAYERDLEADVVGDTSGHFKKMLVVLLQGAREEDDVVSEDLVEQ 177

HSP 2 Score: 23.483 bits (49), Expect = 1.406e-13
Identity = 15/58 (25.86%), Postives = 25/58 (43.10%), Query Frame = 3

Query:  456 LGYRSKHRSMRL*INTRMYMGNDIDQDLEADPKDEYLDLLRATVQCLVRPEHYFEKIL 629
            LG RSK     +        G  I++ + A+   ++  L  A V+C+     YF + L
Sbjct:  201 LGRRSKQHLRMVFDEYLKISGKPIERSIRAELSGDFEKLKLAVVKCVRSTAEYFAERL 258

HSP 3 Score: 75.485 bits (184), Expect = 2.817e-13
Identity = 44/130 (33.85%), Postives = 72/130 (55.38%), Query Frame = 2

Query:    2 RNAAQRKLIRQTYADTYGEDLLKSLDKELTNDFERVVMLWTLDPAERDAFLANEATKRWTSSNQVLMEIACTRSSKQLLEARQAYHARFKKSLEEDVGYHTNGDFRKLLLPLVTAYRYEGDEVNITLANQ 391
            R+ AQR+ I + Y   YG DLL  L  EL+     +++   L PA+ DA    +A +   +    L+EI  TR+++++    +AY   + KSLE+D+   T+  F++LL+ L    R EG E N+T A++
Sbjct:  391 RSNAQRQQILKAYKAHYGRDLLADLKSELSGSLANLILGLMLTPAQYDAKQLRKAVEGDGTDESTLVEIMATRNNQEIAAINEAYQQAYHKSLEDDLSSDTSVHFKRLLVSLALGNRDEGPE-NLTQAHE 519

[Close]

BLAST of CK740113 vs. ExPASy Swiss-Prot
Match: ANXA7_MOUSE (Annexin A7 OS=Mus musculus GN=Anxa7 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.157e-13
Identity = 39/130 (30.00%), Postives = 73/130 (56.15%), Query Frame = 2

Query:    2 RNAAQRKLIRQTYADTYGEDLLKSLDKELTNDFERVVMLWTLDPAERDAFLANEATKRWTSSNQVLMEIACTRSSKQLLEARQAYHARFKKSLEEDVGYHTNGDFRKLLLPLVTAYRYEGDEVNITLANQ 391
            R+  QR+ I+  +   YG+DL+K L  EL+ + E +++   +     DA+   +A +   +  +VL+EI CTR+++++ +  + Y   F + LE+D+   T+G F +LL+ +  A R E   VN  +A +
Sbjct:  190 RSNDQRQQIKAAFKTMYGKDLIKDLKSELSGNMEELILALFMPSTYYDAWSLRKAMQGAGTQERVLIEILCTRTNQEIRDIVRCYQLEFGRDLEKDIRSDTSGHFERLLVSMCQANRDERQSVNHQMAQE 319

[Close]

BLAST of CK740113 vs. ExPASy Swiss-Prot
Match: ANXA1_RAT (Annexin A1 OS=Rattus norvegicus GN=Anxa1 PE=1 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 2.157e-13
Identity = 48/133 (36.09%), Postives = 66/133 (49.62%), Query Frame = 2

Query:    2 RNAAQRKLIRQTYADTYGEDLLKSLDKELTNDFERVVMLWTLDPAERDAFLANEATKRWTSSNQVLMEIACTRSSKQLLEARQAYHARFKKSLEEDVGYHTNGDFRKLLLPLVTAYRYEGDEVNITLANQKLR 400
            R  AQR+ I+  Y    G+ L ++L K LT   E VV+     PA+ DA     A K   +    L+EI  TRS++Q+ E  + Y    K+ L +D+   T+GDFR  LL L    R E   VN  LA+   R
Sbjct:   72 RTNAQRQQIKAAYLQETGKPLDETLKKALTGHLEEVVLAMLKTPAQFDADELRAAMKGLGTDEDTLIEILTTRSNQQIREITRVYREELKRDLAKDITSDTSGDFRNALLALAKGDRCEDMSVNQDLADTDAR 204

The following BLAST results are available for this feature:

BLAST of CK740113 vs. ExPASy Swiss-Prot

BLAST of CK740113 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 41


Match Name	E-value	Identity	Description
ANXA6_HUMAN	8.758e-15	33.61	Annexin A6 OS=Homo sapiens GN=ANXA6 PE=1 SV=3	[more]
ANXA6_BOVIN	1.494e-14	34.43	Annexin A6 OS=Bos taurus GN=ANXA6 PE=1 SV=2	[more]
ANXA7_BOVIN	2.548e-14	31.54	Annexin A7 OS=Bos taurus GN=ANXA7 PE=1 SV=2	[more]
ANX11_MOUSE	4.346e-14	27.01	Annexin A11 OS=Mus musculus GN=Anxa11 PE=1 SV=1	[more]
ANXA1_RABIT	5.026e-14	35.34	Annexin A1 OS=Oryctolagus cuniculus GN=ANXA1 PE=1 ...	[more]
ANXA6_RAT	5.677e-14	32.79	Annexin A6 OS=Rattus norvegicus GN=Anxa6 PE=1 SV=2	[more]
ANXA3_BOVIN	1.265e-13	35.38	Annexin A3 OS=Bos taurus GN=ANXA3 PE=2 SV=3	[more]
ANXA6_CHICK	1.406e-13	33.85	Annexin A6 OS=Gallus gallus GN=ANXA6 PE=2 SV=1	[more]
ANXA7_MOUSE	2.157e-13	30.00	Annexin A7 OS=Mus musculus GN=Anxa7 PE=2 SV=1	[more]
ANXA1_RAT	2.157e-13	36.09	Annexin A1 OS=Rattus norvegicus GN=Anxa1 PE=1 SV=2	[more]

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Properties


Property Name	Value
Genbank description	USDA-FP_6607 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE65E12 5, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>CK740113 ID=CK740113; Name=CK740113; organism=Citrus sinensis; type=EST; length=667bp
CAGAAATGCTGCTCAACGCAAGTTGATTCGACAAACATATGCTGATACTT
ACGGCGAAGACCTCCTCAAGTCGCTCGACAAGGAACTCACTAATGACTTT
GAGAGGGTGGTGATGCTCTGGACTCTTGATCCTGCTGAACGTGATGCGTT
TTTGGCTAATGAAGCCACTAAGAGGTGGACTTCTAGCAACCAGGTTCTTA
TGGAAATTGCATGCACCAGGTCTTCGAAGCAATTGCTCGAAGCAAGGCAG
GCTTATCATGCTCGTTTTAAGAAGTCCCTTGAAGAGGATGTTGGTTATCA
CACCAATGGGGACTTCCGCAAGCTTTTGCTACCCCTTGTGACTGCCTACC
GATATGAGGGTGATGAGGTGAACATTACACTTGCAAATCAGAAGCTAAGA
TTCTCCATGAGAAGATTTCTAATAAGGCTTACAATGATGAGGATCTCATC
AGGATCTTGGCTACAGGAGCAAGCACAGATCAATGCGACTCTGAATCAAT
ACAAGAATGTATATGGGGAATGATATTGATCAGGACTTAGAGGCTGACCC
TAAAGATGAGTACCTCGACCTACTGAGGGCCACAGTTCAGTGCTTAGTCC
GCCCTGAACATTATTTTGAGAAGATACTTCTCTGGCATTAACAAACAGGG
AACAGATGAAGGGCTCT