CK740127

Overview
NameCK740127
Unique NameCK740127
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length398
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1498 contig Csv1_Contig1498:192..589. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK740127 vs. ExPASy Swiss-Prot
Match: NDK1_PEA (Nucleoside diphosphate kinase 1 OS=Pisum sativum GN=NDPK1 PE=2 SV=1)

HSP 1 Score: 207.223 bits (526), Expect = 2.057e-53
Identity = 98/128 (76.56%), Postives = 108/128 (84.38%), Query Frame = 1
Query:    1 IIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPINWQSSLHPWIYE 384
            II RFEKKGF LKGLK + V+R FAEKHY DLS+KPFF  L++YI SGPVVAMIWEG+ VV TGR IIGATNPAQS PGTIRGD AI  GRN+IHGSD+VESA KEIALWFP+G  NW+SSLH WIYE
Sbjct:   22 IISRFEKKGFYLKGLKFVNVERAFAEKHYADLSAKPFFSGLVDYIISGPVVAMIWEGKNVVTTGRKIIGATNPAQSEPGTIRGDFAIDIGRNVIHGSDAVESANKEIALWFPEGAANWESSLHSWIYE 149          
BLAST of CK740127 vs. ExPASy Swiss-Prot
Match: NDK1_SACOF (Nucleoside diphosphate kinase 1 OS=Saccharum officinarum GN=NDPK1 PE=1 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 1.129e-51
Identity = 95/128 (74.22%), Postives = 106/128 (82.81%), Query Frame = 1
Query:    1 IIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPINWQSSLHPWIYE 384
            II RFEKKGF LK LKL+ V+R FAEKHY DLSSKPFF  L++YI SGPVVAM+WEG+ VV TGR IIGATNP  S PGTIRGD A+  GRN+IHGSDS+ESA KEIALWFP+G  +WQSS HPWIYE
Sbjct:   21 IISRFEKKGFYLKALKLVNVERSFAEKHYADLSSKPFFQGLVDYIISGPVVAMVWEGKSVVTTGRKIIGATNPLVSEPGTIRGDFAVDIGRNVIHGSDSIESANKEIALWFPEGLADWQSSQHPWIYE 148          
BLAST of CK740127 vs. ExPASy Swiss-Prot
Match: NDK1_ORYSJ (Nucleoside diphosphate kinase 1 OS=Oryza sativa subsp. japonica GN=NDKR PE=1 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 8.942e-49
Identity = 87/128 (67.97%), Postives = 105/128 (82.03%), Query Frame = 1
Query:    1 IIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPINWQSSLHPWIYE 384
            II RFEKKGF L+G+K M V+R FA++HY DLS KPFF  L+EYI SGPVVAM+WEG+ VV TGR IIGAT P ++APGTIR D A+  GRN+IHGSDSV++ +KEIALWFP+G   W+S+LHPWIYE
Sbjct:   21 IISRFEKKGFYLRGMKFMNVERSFAQQHYADLSDKPFFPGLVEYIISGPVVAMVWEGKDVVATGRRIIGATRPWEAAPGTIRADYAVEVGRNVIHGSDSVDNGKKEIALWFPEGLAEWRSNLHPWIYE 148          
BLAST of CK740127 vs. ExPASy Swiss-Prot
Match: NDK1_ORYSI (Nucleoside diphosphate kinase 1 OS=Oryza sativa subsp. indica GN=NDKR PE=1 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 8.942e-49
Identity = 87/128 (67.97%), Postives = 105/128 (82.03%), Query Frame = 1
Query:    1 IIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPINWQSSLHPWIYE 384
            II RFEKKGF L+G+K M V+R FA++HY DLS KPFF  L+EYI SGPVVAM+WEG+ VV TGR IIGAT P ++APGTIR D A+  GRN+IHGSDSV++ +KEIALWFP+G   W+S+LHPWIYE
Sbjct:   21 IISRFEKKGFFLRGMKFMNVERSFAQQHYADLSDKPFFPGLVEYIISGPVVAMVWEGKDVVATGRRIIGATRPWEAAPGTIRADYAVEVGRNVIHGSDSVDNGKKEIALWFPEGLAEWRSNLHPWIYE 148          
BLAST of CK740127 vs. ExPASy Swiss-Prot
Match: NDK_CYAP4 (Nucleoside diphosphate kinase OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=ndk PE=3 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 1.383e-41
Identity = 81/129 (62.79%), Postives = 98/129 (75.97%), Query Frame = 1
Query:    1 IIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF-PDGPINWQSSLHPWIYE 384
            II RFE KGF L GLKLM V +  AE+HY +   KPFF  L+++ITSGPVVAM+WEG+GVV + R IIGATNP  S PGTIRGD  +  GRNIIHGSD+VE+AQ+EIALWF P   ++W+ +L  WIYE
Sbjct:   21 IIRRFEAKGFKLVGLKLMNVSKDLAEQHYGEHKEKPFFPGLVQFITSGPVVAMVWEGKGVVASARKIIGATNPLNSEPGTIRGDYGVDIGRNIIHGSDAVETAQREIALWFQPAELVSWEPTLTSWIYE 149          
BLAST of CK740127 vs. ExPASy Swiss-Prot
Match: NDK_SYNY3 (Nucleoside diphosphate kinase OS=Synechocystis sp. (strain PCC 6803) GN=ndk PE=1 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 1.806e-41
Identity = 75/129 (58.14%), Postives = 99/129 (76.74%), Query Frame = 1
Query:    1 IIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPIN-WQSSLHPWIYE 384
            I+ RFEKKGF L  +K+MTV +  AEKHYE L+ KPFF  L+ +I S PVVAM+WEG  +V T R +IGAT+P  +APGTIRGD  +  GRNIIHGSD++E+A++EI+LWF D  +N W ++L+PW+YE
Sbjct:   21 IVGRFEKKGFKLVAMKVMTVSQELAEKHYEALNDKPFFSGLVNFICSSPVVAMVWEGNSIVSTSRQMIGATDPHAAAPGTIRGDYGVSVGRNIIHGSDAIETAKREISLWFKDEEVNEWDATLNPWLYE 149          
BLAST of CK740127 vs. ExPASy Swiss-Prot
Match: NDK_ASPFU (Nucleoside diphosphate kinase OS=Aspergillus fumigatus GN=ndk1 PE=3 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 2.359e-41
Identity = 79/129 (61.24%), Postives = 98/129 (75.97%), Query Frame = 1
Query:    1 IIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF-PDGPINWQSSLHPWIYE 384
            II RFE +GF L  +KL++  +   E+HY DLS KPFF  L+ Y+ SGP+ AM+WEG  VVKTGRTI+GATNP  SAPGTIRGD AI  GRN+ HGSDSVE+A+KEIALWF P+  I+W+S+   W+YE
Sbjct:   23 IISRFENRGFKLVAMKLVSPPQSQLEQHYADLSDKPFFKGLVSYMLSGPICAMVWEGRDVVKTGRTILGATNPLASAPGTIRGDFAIDVGRNVCHGSDSVENAKKEIALWFKPEELISWKSATFDWVYE 151          
BLAST of CK740127 vs. ExPASy Swiss-Prot
Match: NDK3_SPIOL (Nucleoside diphosphate kinase 3 OS=Spinacia oleracea PE=1 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 5.254e-41
Identity = 77/128 (60.16%), Postives = 98/128 (76.56%), Query Frame = 1
Query:    1 IIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF-PDGPINWQSSLHPWIY 381
            I+ RFE+KGFSL  +K++   RPFA+KHY DL  KPF+  L+ Y +SGPVVAM+WEGEGV+K GR +IGAT+P +S PGTIRGDLA+V GRNIIHGSD  E+A+ EI LWF P+  +N+  +   WIY
Sbjct:   23 IVARFERKGFSLVAIKVVIPSRPFAQKHYADLKDKPFYVGLVAYWSSGPVVAMVWEGEGVIKYGRKLIGATDPQKSEPGTIRGDLAVVNGRNIIHGSDGPETAKDEIKLWFKPEELVNYTHNAEKWIY 150          
BLAST of CK740127 vs. ExPASy Swiss-Prot
Match: NDK2_TOBAC (Nucleoside diphosphate kinase 2, chloroplastic OS=Nicotiana tabacum GN=NDPK2 PE=1 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 6.862e-41
Identity = 78/129 (60.47%), Postives = 96/129 (74.42%), Query Frame = 1
Query:    1 IIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI-NWQSSLHPWIYE 384
            II RFEKKGF L GLKL    +  AE+HY+DL SKPFF  LI+YITSGPVV M WEG GVV + R +IGATNP  + PGTIRGDLA+ TGRN++HGSDS ++ ++EIALWF +G + +W     PW+ E
Sbjct:  104 IISRFEKKGFKLTGLKLFHCPKELAEEHYKDLQSKPFFPKLIDYITSGPVVCMAWEGVGVVASARKLIGATNPLNAEPGTIRGDLAVQTGRNVVHGSDSPDNGKREIALWFGEGELCSWTPVQEPWLIE 232          
BLAST of CK740127 vs. ExPASy Swiss-Prot
Match: NDK_NOSP7 (Nucleoside diphosphate kinase OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=ndk PE=3 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 8.963e-41
Identity = 79/129 (61.24%), Postives = 97/129 (75.19%), Query Frame = 1
Query:    1 IIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGP-INWQSSLHPWIYE 384
            II RFE KGF+L GLK + V +  AE+HY     +PFFGSL+E+ITS PVVAM+WEG+GVV + R IIGATNP  S PGTIRGD  I  GRN+IHGSD+ E+AQ+EIALWF D   +NWQ  + PW++E
Sbjct:   21 IIRRFETKGFTLVGLKFLKVSKELAEQHYGVHRERPFFGSLVEFITSSPVVAMVWEGDGVVASARKIIGATNPLTSEPGTIRGDFGINIGRNLIHGSDAPETAQQEIALWFKDEELVNWQPHITPWLHE 149          
The following BLAST results are available for this feature:
BLAST of CK740127 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
NDK1_PEA2.057e-5376.56Nucleoside diphosphate kinase 1 OS=Pisum sativum G... [more]
NDK1_SACOF1.129e-5174.22Nucleoside diphosphate kinase 1 OS=Saccharum offic... [more]
NDK1_ORYSJ8.942e-4967.97Nucleoside diphosphate kinase 1 OS=Oryza sativa su... [more]
NDK1_ORYSI8.942e-4967.97Nucleoside diphosphate kinase 1 OS=Oryza sativa su... [more]
NDK_CYAP41.383e-4162.79Nucleoside diphosphate kinase OS=Cyanothece sp. (s... [more]
NDK_SYNY31.806e-4158.14Nucleoside diphosphate kinase OS=Synechocystis sp.... [more]
NDK_ASPFU2.359e-4161.24Nucleoside diphosphate kinase OS=Aspergillus fumig... [more]
NDK3_SPIOL5.254e-4160.16Nucleoside diphosphate kinase 3 OS=Spinacia olerac... [more]
NDK2_TOBAC6.862e-4160.47Nucleoside diphosphate kinase 2, chloroplastic OS=... [more]
NDK_NOSP78.963e-4161.24Nucleoside diphosphate kinase OS=Nostoc punctiform... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_6621 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE6G04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK740127 ID=CK740127; Name=CK740127; organism=Citrus sinensis; type=EST; length=398bp
ATCATCATCAGATTTGAGAAGAAGGGTTTCTCTTTGAAGGGTTTGAAGCT
TATGACTGTGGACCGCCCTTTTGCTGAGAAGCACTATGAGGATTTGTCAT
CGAAGCCTTTCTTTGGTTCTCTGATTGAGTACATTACCTCTGGTCCTGTT
GTTGCTATGATTTGGGAGGGTGAAGGTGTTGTTAAGACTGGCCGCACTAT
TATTGGAGCCACCAACCCTGCGCAGTCTGCTCCTGGAACCATCCGTGGTG
ATTTGGCTATCGTGACGGGCAGGAATATTATCCATGGAAGTGACTCAGTT
GAGAGTGCCCAGAAAGAAATCGCCTTGTGGTTCCCTGATGGCCCTATTAA
CTGGCAGAGCAGCCTTCACCCTTGGATCTATGAGTAAACTAATGTTTG
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