CK740127

Overview
NameCK740127
Unique NameCK740127
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length398
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK740127 vs. ExPASy Swiss-Prot
Match: NDK_PROM5 (Nucleoside diphosphate kinase OS=Prochlorococcus marinus (strain MIT 9515) GN=ndk PE=3 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 8.125e-34
Identity = 73/129 (56.59%), Postives = 89/129 (68.99%), Query Frame = 1
Query:    1 IIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI-NWQSSLHPWIYE 384
            II RFEKKGF L GLK +   +  A+ HY     +PFF  L+ +I+SGPVVAMIWEGEGV+ + R IIGAT P ++ PGTIRGDLAI  GRNIIHGSD  E+A+ EI LWF    I +W++S   W  E
Sbjct:   23 IIGRFEKKGFKLVGLKQLIPSKQLAQDHYGVHRERPFFKDLVNFISSGPVVAMIWEGEGVILSARKIIGATKPLEAEPGTIRGDLAIDIGRNIIHGSDGEETAKFEINLWFDQHEICDWETSDSEWRVE 151          
BLAST of CK740127 vs. ExPASy Swiss-Prot
Match: NDK_PROM9 (Nucleoside diphosphate kinase OS=Prochlorococcus marinus (strain MIT 9312) GN=ndk PE=3 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 1.061e-33
Identity = 69/126 (54.76%), Postives = 89/126 (70.63%), Query Frame = 1
Query:    1 IIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI-NWQSSLHPW 375
            II RFEKKGF L GLK +   +  A+ HY     +PFFG L+++I+SGPVVAM+WEGEGV+ + R +IGAT P ++ PGTIRGDLAI  GRNIIHGSD  ++A+ EI LWF +  +  W +S   W
Sbjct:   23 IIGRFEKKGFKLVGLKQLIPSKDLAQNHYGVHRERPFFGDLVDFISSGPVVAMVWEGEGVILSARKLIGATKPLEAEPGTIRGDLAIDIGRNIIHGSDGEDTAKFEIDLWFNEEELCEWYTSDSKW 148          
BLAST of CK740127 vs. ExPASy Swiss-Prot
Match: NDK_STAS1 (Nucleoside diphosphate kinase OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=ndk PE=3 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 1.810e-33
Identity = 72/129 (55.81%), Postives = 86/129 (66.67%), Query Frame = 1
Query:    1 IIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF-PDGPINWQSSLHPWIYE 384
            II R E+KG  L G K MTV +  AE+HY + + KPF+  LI +ITS PV AM+ EGE  V   R IIG TNP+++ PGTIRGDL +  GRNIIHGSDSVESA KEI LWF  D    +  S   W+YE
Sbjct:   21 IISRIERKGLKLVGGKFMTVPQSLAEEHYAEHTDKPFYKHLISFITSAPVFAMVVEGEDAVHVARHIIGKTNPSEATPGTIRGDLGLTVGRNIIHGSDSVESANKEINLWFKADELSEYSESRESWLYE 149          
BLAST of CK740127 vs. ExPASy Swiss-Prot
Match: NDK_PROMM (Nucleoside diphosphate kinase OS=Prochlorococcus marinus (strain MIT 9313) GN=ndk PE=3 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 1.810e-33
Identity = 68/129 (52.71%), Postives = 88/129 (68.22%), Query Frame = 1
Query:    1 IIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPIN-WQSSLHPWIYE 384
            I+ RFE+KGF L GLK +T  R  A +HY     +PFF  L+++ITSGPV+AM+WEG+GV+ + R +IGAT P  + PGTIRGDLA+  GRN+IHGSD  ++AQ EI LWF    +N W  S   W  E
Sbjct:   23 ILGRFERKGFKLVGLKQVTPSRDLAGEHYGVHRERPFFAGLVDFITSGPVIAMVWEGDGVIASARKLIGATKPLDAEPGTIRGDLAVNIGRNVIHGSDGPDTAQFEINLWFSAEELNAWTPSDQSWRIE 151          
BLAST of CK740127 vs. ExPASy Swiss-Prot
Match: NDK_PROM3 (Nucleoside diphosphate kinase OS=Prochlorococcus marinus (strain MIT 9303) GN=ndk PE=3 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 1.810e-33
Identity = 68/129 (52.71%), Postives = 88/129 (68.22%), Query Frame = 1
Query:    1 IIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPIN-WQSSLHPWIYE 384
            I+ RFE+KGF L GLK +   R  A +HY     +PFF  L+++ITSGPVVAM+WEG+GV+ + R +IGAT P ++ PGTIRGDLA+  GRN+IHGSD  ++AQ EI LWF    +N W  S   W  E
Sbjct:   23 ILGRFERKGFKLVGLKQLAPSRELAGEHYGVHRERPFFAGLVDFITSGPVVAMVWEGDGVIASARKLIGATKPLEAEPGTIRGDLAVNIGRNVIHGSDGPDTAQFEINLWFSPEELNAWTPSDQSWRVE 151          
BLAST of CK740127 vs. ExPASy Swiss-Prot
Match: NDK_PROM0 (Nucleoside diphosphate kinase OS=Prochlorococcus marinus (strain MIT 9301) GN=ndk PE=3 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 1.810e-33
Identity = 68/126 (53.97%), Postives = 90/126 (71.43%), Query Frame = 1
Query:    1 IIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI-NWQSSLHPW 375
            II RFEKKGF L GLK +   +  A+ HY     +PFFG L+++I+SGPVVAM+WEGEGV+ + R +IG+T P ++ PGTIRGDLAI  GRNIIHGSD  ++A+ EI LWF +  +  W++S   W
Sbjct:   23 IIGRFEKKGFKLVGLKQLIPSKELAQNHYGVHRERPFFGDLVDFISSGPVVAMVWEGEGVILSARKLIGSTKPLEAEPGTIRGDLAIDIGRNIIHGSDGEDTAKFEIDLWFNEEELCEWETSDLKW 148          
BLAST of CK740127 vs. ExPASy Swiss-Prot
Match: NDK_STAES (Nucleoside diphosphate kinase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=ndk PE=3 SV=2)

HSP 1 Score: 140.584 bits (353), Expect = 2.364e-33
Identity = 70/129 (54.26%), Postives = 85/129 (65.89%), Query Frame = 1
Query:    1 IIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI-NWQSSLHPWIYE 384
            II R EKKG  L G K M V    AEKHY +   KPF+  LI +ITS PV AM+ EGE  V   R IIG+TNP+++APGTIRGD  +  GRNIIHGSDS ESAQ+E+ LWF    I +++     W+YE
Sbjct:   21 IISRIEKKGLKLVGGKFMQVPMELAEKHYSEHEGKPFYDKLISFITSAPVFAMVVEGENAVAVSRKIIGSTNPSEAAPGTIRGDYGLNLGRNIIHGSDSTESAQREVKLWFTSSEIADYKEPREDWLYE 149          
BLAST of CK740127 vs. ExPASy Swiss-Prot
Match: NDK_STAEQ (Nucleoside diphosphate kinase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=ndk PE=3 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 2.364e-33
Identity = 70/129 (54.26%), Postives = 85/129 (65.89%), Query Frame = 1
Query:    1 IIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI-NWQSSLHPWIYE 384
            II R EKKG  L G K M V    AEKHY +   KPF+  LI +ITS PV AM+ EGE  V   R IIG+TNP+++APGTIRGD  +  GRNIIHGSDS ESAQ+E+ LWF    I +++     W+YE
Sbjct:   21 IISRIEKKGLKLVGGKFMQVPMELAEKHYSEHEGKPFYDKLISFITSAPVFAMVVEGENAVAVSRKIIGSTNPSEAAPGTIRGDYGLNLGRNIIHGSDSTESAQREVKLWFTSSEIADYKEPREDWLYE 149          
BLAST of CK740127 vs. ExPASy Swiss-Prot
Match: NDK_PROMA (Nucleoside diphosphate kinase OS=Prochlorococcus marinus GN=ndk PE=3 SV=2)

HSP 1 Score: 140.584 bits (353), Expect = 2.364e-33
Identity = 69/129 (53.49%), Postives = 86/129 (66.67%), Query Frame = 1
Query:    1 IIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI-NWQSSLHPWIYE 384
            I+ RFE+KGF L GLK +   +  AEKHY     +PFF  L+ +ITSGPVVAM+WEG+GV+ + R +IGAT P ++ PGTIRGDL I  GRN+IHGSD  E+A  EI LWF    + NW  S   W  E
Sbjct:   23 ILGRFERKGFKLVGLKQLIPSKELAEKHYGVHKERPFFTGLVGFITSGPVVAMVWEGDGVILSARKLIGATKPLEAEPGTIRGDLGINIGRNVIHGSDGPETASFEIDLWFNSSELNNWNPSDQKWRVE 151          
BLAST of CK740127 vs. ExPASy Swiss-Prot
Match: NDK_BACLD (Nucleoside diphosphate kinase OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=ndk PE=3 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 4.032e-33
Identity = 66/128 (51.56%), Postives = 89/128 (69.53%), Query Frame = 1
Query:    1 IIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF-PDGPINWQSSLHPWIY 381
            I++RFE+KG  L G KLM V    A +HY++ + KPFFG L+++ITSGPV AM+WEGE  +   R +IG TNP ++ PGTIRGD  +  G+NIIHGSDS ESA +EI L+F  D  +  +  ++ WIY
Sbjct:   21 ILLRFERKGLQLIGAKLMKVSEETAGEHYKEHNGKPFFGELVDFITSGPVFAMVWEGEDAIAVARQLIGKTNPKEALPGTIRGDFGMFVGKNIIHGSDSPESAAREINLFFKEDELVEDEKLMNQWIY 148          
The following BLAST results are available for this feature:
BLAST of CK740127 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
NDK_PROM58.125e-3456.59Nucleoside diphosphate kinase OS=Prochlorococcus m... [more]
NDK_PROM91.061e-3354.76Nucleoside diphosphate kinase OS=Prochlorococcus m... [more]
NDK_STAS11.810e-3355.81Nucleoside diphosphate kinase OS=Staphylococcus sa... [more]
NDK_PROMM1.810e-3352.71Nucleoside diphosphate kinase OS=Prochlorococcus m... [more]
NDK_PROM31.810e-3352.71Nucleoside diphosphate kinase OS=Prochlorococcus m... [more]
NDK_PROM01.810e-3353.97Nucleoside diphosphate kinase OS=Prochlorococcus m... [more]
NDK_STAES2.364e-3354.26Nucleoside diphosphate kinase OS=Staphylococcus ep... [more]
NDK_STAEQ2.364e-3354.26Nucleoside diphosphate kinase OS=Staphylococcus ep... [more]
NDK_PROMA2.364e-3353.49Nucleoside diphosphate kinase OS=Prochlorococcus m... [more]
NDK_BACLD4.032e-3351.56Nucleoside diphosphate kinase OS=Bacillus lichenif... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_6621 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE6G04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK740127 ID=CK740127; Name=CK740127; organism=Citrus sinensis; type=EST; length=398bp
ATCATCATCAGATTTGAGAAGAAGGGTTTCTCTTTGAAGGGTTTGAAGCT
TATGACTGTGGACCGCCCTTTTGCTGAGAAGCACTATGAGGATTTGTCAT
CGAAGCCTTTCTTTGGTTCTCTGATTGAGTACATTACCTCTGGTCCTGTT
GTTGCTATGATTTGGGAGGGTGAAGGTGTTGTTAAGACTGGCCGCACTAT
TATTGGAGCCACCAACCCTGCGCAGTCTGCTCCTGGAACCATCCGTGGTG
ATTTGGCTATCGTGACGGGCAGGAATATTATCCATGGAAGTGACTCAGTT
GAGAGTGCCCAGAAAGAAATCGCCTTGTGGTTCCCTGATGGCCCTATTAA
CTGGCAGAGCAGCCTTCACCCTTGGATCTATGAGTAAACTAATGTTTG
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