CK740127
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK740127 vs. ExPASy Swiss-Prot
Match: NDK_THERP (Nucleoside diphosphate kinase OS=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) GN=ndk PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 6.662e-28 Identity = 60/127 (47.24%), Postives = 85/127 (66.93%), Query Frame = 1 Query: 1 IIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF-PDGPINWQSSLHPWI 378 ++ R E++G GLKLM VDR AE+HY + KPF+ L+ +ITSGPVV + EG ++ R +G T+PAQ+ PGTIRGDLA+ G+N+IHGSDS E A EI L+F D ++++ ++ WI Sbjct: 21 VLRRLEQRGLRFVGLKLMKVDREVAERHYAEHRGKPFYEDLLAFITSGPVVVGVVEGPRAIEITRKTMGKTDPAQAEPGTIRGDLALTIGQNVIHGSDSPEKASYEIGLFFREDELVSYERAIDRWI 147
BLAST of CK740127 vs. ExPASy Swiss-Prot
Match: NDK_NOCFA (Nucleoside diphosphate kinase OS=Nocardia farcinica GN=ndk PE=3 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 1.136e-27 Identity = 57/117 (48.72%), Postives = 80/117 (68.38%), Query Frame = 1 Query: 1 IIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQ-SAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI 348 ++ R E+KG + L+L V A +HY + + KPFFGSLIE+ITSGPVVA + EG + R + G T+P + +APG+IRGD + T N++HGSDS ESA++EI LWFP+ P+ Sbjct: 22 VLARIERKGLKIAALELKQVSDELAREHYAEHADKPFFGSLIEFITSGPVVAAVLEGPRAIAAFRQLAGGTDPVEKAAPGSIRGDFGLETQYNLVHGSDSPESAKREIGLWFPEFPV 138
BLAST of CK740127 vs. ExPASy Swiss-Prot
Match: NDK_METTH (Nucleoside diphosphate kinase OS=Methanobacterium thermoautotrophicum GN=ndk PE=3 SV=2) HSP 1 Score: 121.709 bits (304), Expect = 1.136e-27 Identity = 60/129 (46.51%), Postives = 86/129 (66.67%), Query Frame = 1 Query: 1 IIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI-NWQSSLHPWIYE 384 II RFE +G + K++ + A +HY++ KPFF L++YITS PV+AM+ EG+ + R ++GATNPA++ GTIRGD A+ TGRNIIH SDS ESA++EI L+F + I +++ IYE Sbjct: 21 IIARFEDRGLKIVAFKMLQIPEDLAMEHYQEHREKPFFRDLVDYITSAPVIAMVIEGKDCISLIRKMVGATNPAEADLGTIRGDFALETGRNIIHASDSPESAEREIKLFFDESEICSYEMPDREMIYE 149
BLAST of CK740127 vs. ExPASy Swiss-Prot
Match: NDK_METST (Nucleoside diphosphate kinase OS=Methanosphaera stadtmanae (strain DSM 3091) GN=ndk PE=3 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 1.136e-27 Identity = 59/113 (52.21%), Postives = 77/113 (68.14%), Query Frame = 1 Query: 1 IIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPD 339 I+ RFEK+G + K + + A+ HY + S KPFF LI YITSGPV AM+ EG+ V+ R ++GATNP ++ GTIRGD I TGRNI+H SDS ESAQ+EI L+F + Sbjct: 22 ILTRFEKRGLKVIAAKTLMISEDLAKTHYGEHSDKPFFNDLISYITSGPVFAMVLEGDDVISLVRKMVGATNPKEADIGTIRGDYGIDTGRNIVHASDSEESAQREINLFFDE 134
BLAST of CK740127 vs. ExPASy Swiss-Prot
Match: NDK_THEFY (Nucleoside diphosphate kinase OS=Thermobifida fusca (strain YX) GN=ndk PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 1.484e-27 Identity = 56/113 (49.56%), Postives = 79/113 (69.91%), Query Frame = 1 Query: 1 IIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPD 339 +I R E+KG + ++L T+D A+ HYE+ KPFF SL+E+IT GP+VAM+ EG ++ R++ GAT+P +APGTIRGD + NI+HGSDS SA++EI L+FPD Sbjct: 21 VISRIERKGLKIVAMELRTLDEETAKAHYEEHVEKPFFSSLVEFITGGPLVAMVVEGNRAIEAFRSLAGATDPVLAAPGTIRGDYGLDVQANIVHGSDSTYSAEREIKLFFPD 133
BLAST of CK740127 vs. ExPASy Swiss-Prot
Match: NDK_PYRHO (Nucleoside diphosphate kinase OS=Pyrococcus horikoshii GN=ndk PE=1 SV=2) HSP 1 Score: 121.324 bits (303), Expect = 1.484e-27 Identity = 62/131 (47.33%), Postives = 83/131 (63.36%), Query Frame = 1 Query: 1 IIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGR---NIIHGSDSVESAQKEIALWFPDGPINWQSSLHPWIYE 384 II RFEKKG + G+K++ +DR AEKHYE+ KPFF +LI+YIT PVV M+ EG V+ R + GAT+P +APGTIRGD + N+IH SDS ESA++EI+L+F + W Y+ Sbjct: 24 IISRFEKKGLKIVGMKMIWIDRELAEKHYEEHREKPFFKALIDYITKTPVVVMVLEGRYAVEVVRKMAGATDPKDAAPGTIRGDFGLEVSDAICNVIHASDSKESAEREISLFFKPEELFEYPRAADWFYK 154
BLAST of CK740127 vs. ExPASy Swiss-Prot
Match: NDK_MYCUA (Nucleoside diphosphate kinase OS=Mycobacterium ulcerans (strain Agy99) GN=ndk PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 1.484e-27 Identity = 60/113 (53.10%), Postives = 76/113 (67.26%), Query Frame = 1 Query: 1 IIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSA-PGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFP 336 II R E+KG ++ L+L V A +HY + KPFFGSL+E+ITS PVVA I EG + R + G T+P + A PGTIRGD + T N++HGSDS ESAQ+EIALWFP Sbjct: 22 IISRIERKGLAIAALELRNVTEELASQHYAEHEGKPFFGSLLEFITSAPVVAAIVEGPRAIAAFRQLAGGTDPVEKATPGTIRGDFGLETQFNLVHGSDSAESAQREIALWFP 134
BLAST of CK740127 vs. ExPASy Swiss-Prot
Match: NDK_MYCPA (Nucleoside diphosphate kinase OS=Mycobacterium paratuberculosis GN=ndk PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 1.484e-27 Identity = 61/114 (53.51%), Postives = 78/114 (68.42%), Query Frame = 1 Query: 1 IIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSA-PGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPD 339 II R E+KG +L L+L V + A +HY + KPFF SL+E+ITSGPVVA I EG + R + G T+P + A PGTIRGD + T N++HGSDSVESA++EI LWFPD Sbjct: 22 IIGRIERKGLTLVALELRHVSQDLAAQHYAEHEGKPFFASLLEFITSGPVVAAIVEGPRAIAAFRQLAGGTDPVEKAIPGTIRGDFGLETQFNLVHGSDSVESAKREIGLWFPD 135
BLAST of CK740127 vs. ExPASy Swiss-Prot
Match: NDK_MYCMM (Nucleoside diphosphate kinase OS=Mycobacterium marinum (strain ATCC BAA-535 / M) GN=ndk PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 1.484e-27 Identity = 60/113 (53.10%), Postives = 76/113 (67.26%), Query Frame = 1 Query: 1 IIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSA-PGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFP 336 II R E+KG ++ L+L V A +HY + KPFFGSL+E+ITS PVVA I EG + R + G T+P + A PGTIRGD + T N++HGSDS ESAQ+EIALWFP Sbjct: 22 IISRIERKGLAIAALELRNVTEELASQHYAEHEGKPFFGSLLEFITSAPVVAAIVEGPRAIAAFRQLAGGTDPVEKATPGTIRGDFGLETQFNLVHGSDSAESAQREIALWFP 134
BLAST of CK740127 vs. ExPASy Swiss-Prot
Match: NDK_METHJ (Nucleoside diphosphate kinase OS=Methanospirillum hungatei (strain JF-1 / DSM 864) GN=ndk PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 1.484e-27 Identity = 60/129 (46.51%), Postives = 84/129 (65.12%), Query Frame = 1 Query: 1 IIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF-PDGPINWQSSLHPWIYE 384 +I RFE++GF + + + +HY + KPFF L YITSGP M+WEG+ +VK R +IGATNPA +APGTIRGD A+ G N+IHGSDSVE+A +EIA+ F P+ +++ ++YE Sbjct: 21 VITRFERRGFKMVASRFEKLPDARVMEHYAEHVQKPFFPGLKAYITSGPCFLMVWEGKDIVKISRDMIGATNPAGAAPGTIRGDYALEIGMNVIHGSDSVETANREIAIHFKPEELVSYTRIDEQYLYE 149 The following BLAST results are available for this feature:
BLAST of CK740127 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CK740127 ID=CK740127; Name=CK740127; organism=Citrus sinensis; type=EST; length=398bpback to top |