CK740127

Overview
NameCK740127
Unique NameCK740127
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length398
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK740127 vs. ExPASy Swiss-Prot
Match: NDK_ENCCU (Nucleoside diphosphate kinase OS=Encephalitozoon cuniculi GN=NDK1 PE=1 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 1.484e-27
Identity = 63/129 (48.84%), Postives = 81/129 (62.79%), Query Frame = 1
Query:    1 IIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDG--PINWQSSLHPWIY 381
            II RFE+KG  L   K +   R   E HY  LSS PFF  ++E + SG V+AM+W G+  V  GR +IG TNP  ++ GTIRGD  + TG+NIIHGSD VE+A+KEI LW  D   P+++      WIY
Sbjct:   21 IIQRFEEKGLYLAASKCVIPKREVLETHYSHLSSMPFFSEMVEDMMSGMVLAMVWVGKDAVSIGRKLIGETNPQAASVGTIRGDYGVSTGKNIIHGSDCVENAEKEIKLWIGDDVQPVSFFDK--EWIY 147          
BLAST of CK740127 vs. ExPASy Swiss-Prot
Match: NDK_METJA (Nucleoside diphosphate kinase OS=Methanocaldococcus jannaschii GN=ndk PE=1 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 1.938e-27
Identity = 58/116 (50.00%), Postives = 80/116 (68.97%), Query Frame = 1
Query:    1 IIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI 348
            II RFE KGF +  +K++ +DR  AEK+YE+   K F+  LI ++TSG ++ M+ EGE  +   R +IG TNPA++ PGTIRGD A+ T  NIIH SDS ESA++EI L+F +  I
Sbjct:   22 IIERFENKGFEIVAMKMIKLDREMAEKYYEEHKGKEFYERLINFMTSGRMIVMVVEGENAISVVRKMIGKTNPAEAEPGTIRGDFALTTPDNIIHASDSKESAEREIKLFFKEDEI 137          
BLAST of CK740127 vs. ExPASy Swiss-Prot
Match: NDK_CORDI (Nucleoside diphosphate kinase OS=Corynebacterium diphtheriae GN=ndk PE=3 SV=2)

HSP 1 Score: 120.553 bits (301), Expect = 2.532e-27
Identity = 55/114 (48.25%), Postives = 78/114 (68.42%), Query Frame = 1
Query:    1 IIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNP-AQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPD 339
            II R E+KG  +  L L   DR  AEKHY + + KPFFG L+ +ITS P++A + EG   ++  R + G T+P A++ PGTIRGD A+    N++HGSDS ESA++EI++WFP+
Sbjct:   22 IIARIERKGLKISALDLRVADRETAEKHYAEHADKPFFGELVNFITSAPLIAGVVEGPRAIEAWRQLAGGTDPVAKATPGTIRGDFALEVSTNVVHGSDSPESAEREISIWFPN 135          
BLAST of CK740127 vs. ExPASy Swiss-Prot
Match: NDK_MOOTA (Nucleoside diphosphate kinase OS=Moorella thermoacetica (strain ATCC 39073) GN=ndk PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 3.306e-27
Identity = 57/111 (51.35%), Postives = 79/111 (71.17%), Query Frame = 1
Query:    1 IIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF 333
            I+ R E+KG+ +  LK++ +    A  HY +   KPF+  LI +ITSGPVVAM+ EG GV+   R ++GATNP ++APGTIRGD A+ T  N+IHG+DS  SA++EIAL+F
Sbjct:   23 ILARLEQKGYRIVALKMLRLTPEMAAAHYAEHRDKPFYQDLINHITSGPVVAMVLEGPGVIAGLRRLMGATNPQEAAPGTIRGDFALETSDNVIHGADSPASAEREIALYF 133          
BLAST of CK740127 vs. ExPASy Swiss-Prot
Match: NDK_SULTO (Nucleoside diphosphate kinase OS=Sulfolobus tokodaii GN=ndk PE=3 SV=2)

HSP 1 Score: 119.783 bits (299), Expect = 4.318e-27
Identity = 57/113 (50.44%), Postives = 79/113 (69.91%), Query Frame = 1
Query:    1 IIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPD 339
            II RFEK+G  + GLK++ +DRP AE+ YE+   K FF  LI YITSGPVV M+ EG+  V   R +IG T+P ++ PGTIRGD A+    N+IH SDS E A++E++++F +
Sbjct:   23 IISRFEKRGLKIIGLKMVKIDRPTAERLYEEHKGKSFFEELISYITSGPVVCMVIEGDEAVSVVRKMIGNTDPKEAPPGTIRGDYALSKAENVIHASDSEEKAKREMSIFFKE 135          
BLAST of CK740127 vs. ExPASy Swiss-Prot
Match: NDK_SACEN (Nucleoside diphosphate kinase OS=Saccharopolyspora erythraea (strain NRRL 23338) GN=ndk PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 4.318e-27
Identity = 57/114 (50.00%), Postives = 79/114 (69.30%), Query Frame = 1
Query:    1 IIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPA-QSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPD 339
            +I R E+KG  L  L+L  V++  AE+HY +   KPFFGSL+E+ITSGPVVA + EG   +   R + G T+P  ++APG+IRGD  +    N++HGSDS ESA++EI LWFP+
Sbjct:   22 VIGRIERKGLKLVALELRQVEQQLAEQHYAEHDGKPFFGSLLEFITSGPVVAAVVEGPRAISAFRQLAGGTDPVDKAAPGSIRGDYGLEVQYNLVHGSDSAESAEREIKLWFPE 135          
BLAST of CK740127 vs. ExPASy Swiss-Prot
Match: NDK_METMA (Nucleoside diphosphate kinase OS=Methanosarcina mazei GN=ndk PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 7.366e-27
Identity = 56/116 (48.28%), Postives = 80/116 (68.97%), Query Frame = 1
Query:    1 IIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI 348
            +I R EK+G  +  L++  +    A++HY + +++PFF SLIE+ITSGP V+M+  G+  +K  R I GATNP  +APGTIRGD A+  GRN++H SDS E+A +EIA+ F D  I
Sbjct:   21 VISRIEKRGLKIVALRMNVIAEATAKEHYGEHAARPFFPSLIEFITSGPSVSMVVAGKDAIKVMRAINGATNPVDAAPGTIRGDFALDVGRNVVHASDSPEAAAREIAIHFKDSEI 136          
BLAST of CK740127 vs. ExPASy Swiss-Prot
Match: NDK_METAC (Nucleoside diphosphate kinase OS=Methanosarcina acetivorans GN=ndk PE=3 SV=2)

HSP 1 Score: 119.013 bits (297), Expect = 7.366e-27
Identity = 56/116 (48.28%), Postives = 80/116 (68.97%), Query Frame = 1
Query:    1 IIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI 348
            +I R EK+G  +  L++  +    A++HY + +++PFF SLIE+ITSGP V+M+  G+  +K  R I GATNP  +APGTIRGD A+  GRN++H SDS E+A +EIA+ F D  I
Sbjct:   21 VISRIEKRGLKILALRMNVIAEATAKEHYGEHAARPFFPSLIEFITSGPSVSMVVAGKDAIKVMRAINGATNPVDAAPGTIRGDFALDVGRNVVHASDSPEAAAREIAIHFKDSEI 136          
BLAST of CK740127 vs. ExPASy Swiss-Prot
Match: NDKB_MERSE (Nucleoside diphosphate kinase B (Fragments) OS=Merluccius senegalensis GN=nme2 PE=1 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 7.366e-27
Identity = 55/104 (52.88%), Postives = 74/104 (71.15%), Query Frame = 1
Query:   76 EKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF-PDGPINWQSSLHPWIYE 384
            ++HY DL   PF+  L +Y++SGPV AM+WEGEG+VK    ++G TNPA S PG+IRGD  I  GRNIIHGSD+VE+A+ E+ALWF P+  + +      W+YE
Sbjct:   26 KQHYLDLKDMPFYAGLCKYMSSGPVFAMVWEGEGIVKM---MLGETNPADSKPGSIRGDFCINIGRNIIHGSDTVENAKMEVALWFKPEEFVTYTEKAKAWVYE 126          
BLAST of CK740127 vs. ExPASy Swiss-Prot
Match: NDKB_MERPO (Nucleoside diphosphate kinase B (Fragments) OS=Merluccius polli GN=nme2 PE=1 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 7.366e-27
Identity = 55/104 (52.88%), Postives = 74/104 (71.15%), Query Frame = 1
Query:   76 EKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF-PDGPINWQSSLHPWIYE 384
            ++HY DL   PF+  L +Y++SGPV AM+WEGEG+VK    ++G TNPA S PG+IRGD  I  GRNIIHGSD+VE+A+ E+ALWF P+  + +      W+YE
Sbjct:   26 KQHYLDLKDMPFYAGLCKYMSSGPVFAMVWEGEGIVKM---MLGETNPADSKPGSIRGDFCINIGRNIIHGSDTVENAKMEVALWFKPEEFVTYTEKAKAWVYE 126          
The following BLAST results are available for this feature:
BLAST of CK740127 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
NDK_ENCCU1.484e-2748.84Nucleoside diphosphate kinase OS=Encephalitozoon c... [more]
NDK_METJA1.938e-2750.00Nucleoside diphosphate kinase OS=Methanocaldococcu... [more]
NDK_CORDI2.532e-2748.25Nucleoside diphosphate kinase OS=Corynebacterium d... [more]
NDK_MOOTA3.306e-2751.35Nucleoside diphosphate kinase OS=Moorella thermoac... [more]
NDK_SULTO4.318e-2750.44Nucleoside diphosphate kinase OS=Sulfolobus tokoda... [more]
NDK_SACEN4.318e-2750.00Nucleoside diphosphate kinase OS=Saccharopolyspora... [more]
NDK_METMA7.366e-2748.28Nucleoside diphosphate kinase OS=Methanosarcina ma... [more]
NDK_METAC7.366e-2748.28Nucleoside diphosphate kinase OS=Methanosarcina ac... [more]
NDKB_MERSE7.366e-2752.88Nucleoside diphosphate kinase B (Fragments) OS=Mer... [more]
NDKB_MERPO7.366e-2752.88Nucleoside diphosphate kinase B (Fragments) OS=Mer... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_6621 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE6G04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK740127 ID=CK740127; Name=CK740127; organism=Citrus sinensis; type=EST; length=398bp
ATCATCATCAGATTTGAGAAGAAGGGTTTCTCTTTGAAGGGTTTGAAGCT
TATGACTGTGGACCGCCCTTTTGCTGAGAAGCACTATGAGGATTTGTCAT
CGAAGCCTTTCTTTGGTTCTCTGATTGAGTACATTACCTCTGGTCCTGTT
GTTGCTATGATTTGGGAGGGTGAAGGTGTTGTTAAGACTGGCCGCACTAT
TATTGGAGCCACCAACCCTGCGCAGTCTGCTCCTGGAACCATCCGTGGTG
ATTTGGCTATCGTGACGGGCAGGAATATTATCCATGGAAGTGACTCAGTT
GAGAGTGCCCAGAAAGAAATCGCCTTGTGGTTCCCTGATGGCCCTATTAA
CTGGCAGAGCAGCCTTCACCCTTGGATCTATGAGTAAACTAATGTTTG
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