CK740127
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK740127 vs. ExPASy Swiss-Prot
Match: NDK_RHIEC (Nucleoside diphosphate kinase OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=ndk PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 8.721e-20 Identity = 50/111 (45.05%), Postives = 65/111 (58.56%), Query Frame = 1 Query: 16 EKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI 348 E G + K + + R AE Y +PFFG L+E +TSGP V + EGEG + R I+GATNPA +A GTIR A+ G N +HGSD+ E+A +EI WF D I Sbjct: 28 EDAGLRVVASKRVWMSRREAEGFYAVHKDRPFFGELVEGMTSGPTVVQVLEGEGAILKNREIMGATNPANAAEGTIRKVHALSIGENSVHGSDAPETAAQEIKYWFSDTEI 138
BLAST of CK740127 vs. ExPASy Swiss-Prot
Match: NDK_METNO (Nucleoside diphosphate kinase OS=Methylobacterium nodulans (strain ORS2060 / LMG 21967) GN=ndk PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 8.721e-20 Identity = 47/111 (42.34%), Postives = 69/111 (62.16%), Query Frame = 1 Query: 16 EKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI 348 E+ G + + + + A+ YE + +PF+G L+ ++TSGPVV + EGE V R ++GATNPAQ+A GTIR A+ G N +HGSDS E+A+ EIA +F + I Sbjct: 28 EEAGLRIVAQRRIRMSEAQAKTFYEVHAERPFYGELVSFMTSGPVVVQVLEGENAVAKYREVMGATNPAQAAEGTIRKKFALSVGENSVHGSDSAENAKVEIAQFFDEKDI 138
BLAST of CK740127 vs. ExPASy Swiss-Prot
Match: NDK_CAMJR (Nucleoside diphosphate kinase OS=Campylobacter jejuni (strain RM1221) GN=ndk PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 8.721e-20 Identity = 48/116 (41.38%), Postives = 68/116 (58.62%), Query Frame = 1 Query: 1 IIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI 348 I+ RFE G + +K + + + AE Y +PFF L+E++ SGPVV + EGEG V R ++GATNP ++ GTIR D A N +HGSDS+E+A+ EI +F I Sbjct: 21 ILDRFESNGLRIAAMKKVQLSKEQAENFYAVHKERPFFKDLVEFMISGPVVVSVLEGEGAVLKNRDLMGATNPKEAKAGTIRADFAESIDANAVHGSDSLENAKIEIDFFFKPNEI 136
BLAST of CK740127 vs. ExPASy Swiss-Prot
Match: NDK_CAMJ8 (Nucleoside diphosphate kinase OS=Campylobacter jejuni subsp. jejuni serotype O:6 (strain 81116 / NCTC 11828) GN=ndk PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 8.721e-20 Identity = 48/116 (41.38%), Postives = 68/116 (58.62%), Query Frame = 1 Query: 1 IIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI 348 I+ RFE G + +K + + + AE Y +PFF L+E++ SGPVV + EGEG V R ++GATNP ++ GTIR D A N +HGSDS+E+A+ EI +F I Sbjct: 21 ILDRFESNGLRIAAMKKVQLSKEQAENFYAVHKERPFFKDLVEFMISGPVVVSVLEGEGAVLKNRDLMGATNPKEAKAGTIRADFAESIDANAVHGSDSLENAKIEIDFFFKPNEI 136
BLAST of CK740127 vs. ExPASy Swiss-Prot
Match: NDK_ALISL (Nucleoside diphosphate kinase OS=Aliivibrio salmonicida (strain LFI1238) GN=ndk PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 8.721e-20 Identity = 47/113 (41.59%), Postives = 71/113 (62.83%), Query Frame = 1 Query: 10 RFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI 348 R EK G + K++++ + A+ Y + K FF +L+EY+TSGPV+ + EGE V+ R ++G TNP ++A G++R D AI N +HGSDS ESA +EIA +F + I Sbjct: 26 RIEKTGMQVVAAKMLSLTKEQAQGFYAEHEGKEFFDALVEYMTSGPVMVQVLEGESVITRYRELMGKTNPDEAACGSLRSDYAISMRYNSVHGSDSPESAAREIAYFFVEDEI 138
BLAST of CK740127 vs. ExPASy Swiss-Prot
Match: NDK_ACIAC (Nucleoside diphosphate kinase OS=Acidovorax avenae subsp. citrulli (strain AAC00-1) GN=ndk PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 8.721e-20 Identity = 44/112 (39.29%), Postives = 68/112 (60.71%), Query Frame = 1 Query: 1 IIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFP 336 I RFE G + ++ + R AE+ Y +PFF L++++ SGPV+ + EGE + R ++GAT+P ++APGTIR D A N +HGSD+ E+AQ E++ +FP Sbjct: 23 IYARFEAAGLKIAAARMAHLSRQEAEQFYAVHKERPFFKDLVDFMISGPVMIQVLEGENAILKNRELMGATDPKKAAPGTIRADFADSIDANAVHGSDAAETAQVEVSFFFP 134
BLAST of CK740127 vs. ExPASy Swiss-Prot
Match: NDK_VARPS (Nucleoside diphosphate kinase OS=Variovorax paradoxus (strain S110) GN=ndk PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 1.139e-19 Identity = 45/111 (40.54%), Postives = 67/111 (60.36%), Query Frame = 1 Query: 1 IIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF 333 I+ RFE G + KL+ + R AE+ Y +PFF L++++ SGPV + EGE + R ++GAT+P ++APGTIR D A N +HGSD+ E+A E+A +F Sbjct: 23 IVSRFEAAGLKIVAAKLVHLSRNEAEQFYSVHKERPFFKDLVDFMISGPVFVQVLEGENAIAKNRDLMGATDPKKAAPGTIRADFADSIDANAVHGSDAPETAANEVAFFF 133
BLAST of CK740127 vs. ExPASy Swiss-Prot
Match: NDK_SILST (Nucleoside diphosphate kinase OS=Silicibacter sp. (strain TM1040) GN=ndk PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 1.139e-19 Identity = 46/108 (42.59%), Postives = 68/108 (62.96%), Query Frame = 1 Query: 10 RFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF 333 +FE+ G + K + + + A K Y + +PF+ L E+++S PVV + EGEG + R I+GATNPA +APGTIR + A G N +HGSD+ E+A +EIA +F Sbjct: 26 KFEEAGLRIVAQKRIHMTKAQAGKFYAVHAERPFYDELCEFMSSAPVVVQVLEGEGAIAKNREIMGATNPADAAPGTIRAEFAESVGENSVHGSDAPETAAEEIAYFF 133
BLAST of CK740127 vs. ExPASy Swiss-Prot
Match: NDK_PROA2 (Nucleoside diphosphate kinase OS=Prosthecochloris aestuarii (strain DSM 271 / SK 413) GN=ndk PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 1.139e-19 Identity = 50/111 (45.05%), Postives = 69/111 (62.16%), Query Frame = 1 Query: 1 IIIRFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWF 333 +I + E+ GF + +K + A + Y S +PF+G L+E+++SGP V MI E E V RT+IGAT+PA++A GTIR A G NIIHGSDS E+AQ E +F Sbjct: 21 VIDKIERAGFRVVAMKKTKLTAQTAGEFYAVHSQRPFYGELVEFMSSGPCVPMILEKENAVADFRTLIGATDPAEAAEGTIRNLFADSKGENIIHGSDSAENAQIEAGFFF 131
BLAST of CK740127 vs. ExPASy Swiss-Prot
Match: NDK_VIBSL (Nucleoside diphosphate kinase OS=Vibrio splendidus (strain LGP32) GN=ndk PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 1.488e-19 Identity = 47/113 (41.59%), Postives = 67/113 (59.29%), Query Frame = 1 Query: 10 RFEKKGFSLKGLKLMTVDRPFAEKHYEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPI 348 R EK G + K++++ A Y + K FFG L E++TSGP++ + EGE + R ++G TNP ++A GTIR D AI N +HGSDS ESA +EI +FP+ I Sbjct: 26 RIEKAGLQIIAAKMVSLTEAQASGFYAEHEGKEFFGPLKEFMTSGPIMVQVLEGENAIARYRELMGKTNPEEAACGTIRADYAISMRYNSVHGSDSPESAAREIEFFFPESEI 138 The following BLAST results are available for this feature:
BLAST of CK740127 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CK740127 ID=CK740127; Name=CK740127; organism=Citrus sinensis; type=EST; length=398bpback to top |