CK740129

Overview
NameCK740129
Unique NameCK740129
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length574
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK740129 vs. ExPASy Swiss-Prot
Match: NIP22_MAIZE (Aquaporin NIP2-2 OS=Zea mays GN=NIP2-2 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.222e-13
Identity = 57/169 (33.73%), Postives = 85/169 (50.30%), Query Frame = 1
Query:   10 GGMIF-VLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGP 513
            GG+I  V++Y T  ISG H+NPAVT      R    I+   Y  AQ  GA+C   ++KA + H    +G    T  SG +   AL  EI+ TF +++   +     R+     V  LA L +G AV +  +   P++G  +NPAR+   AV  N    +   WI+++GP
Sbjct:   91 GGLIVTVMIYATGHISGAHMNPAVTLSFACFRHFPWIQVPFYWAAQFTGAMCAAFVLKAVL-HPIAVIG---TTTPSGPH-WHALLIEIVVTFNMMFVTCAVATDSRA-----VGELAGLAVGSAVCITSIFAGPVSGGSMNPARTLAPAVASN---VFTGLWIYFLGP 246          
BLAST of CK740129 vs. ExPASy Swiss-Prot
Match: AQPM_ARCFU (Probable aquaporin aqpM OS=Archaeoglobus fulgidus GN=aqpM PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.268e-13
Identity = 60/176 (34.09%), Postives = 81/176 (46.02%), Query Frame = 1
Query:    4 AFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGG-GANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNND-----KAWDDHWIFWVGP 513
            AF   I  ++Y    ISG HINPAVT  L+   +      V Y+VAQ +GA  G  L  A +     ++GG GA     G   G A+  E IGTF+L+  +      +R+      P  A L IG  V  +      ITG+ +NPAR+FG    Y  D       W    I+ +GP
Sbjct:   62 AFALAIAAVIYSLGRISGAHINPAVTIALWSIGRFPGREVVPYIVAQFIGAALGSLLFLACVGPAAATVGGLGATAPFPGIGYGQAILTEAIGTFLLMLVIMGVAVDERAP-----PGFAGLVIGLTVGGIITTIGNITGSSLNPARTFGP---YLGDSLMGINLWQYFPIYVIGP 229          

HSP 2 Score: 20.7866 bits (42), Expect = 1.268e-13
Identity = 8/17 (47.06%), Postives = 12/17 (70.59%), Query Frame = 2
Query:  512 PFVGALAAAAYHQYILR 562
            P VGA+AAA  + Y+ +
Sbjct:  229 PIVGAVAAAWLYNYLAK 245          
BLAST of CK740129 vs. ExPASy Swiss-Prot
Match: NIP21_ORYSJ (Aquaporin NIP2-1 OS=Oryza sativa subsp. japonica GN=NIP2-1 PE=1 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 2.085e-13
Identity = 60/170 (35.29%), Postives = 89/170 (52.35%), Query Frame = 1
Query:   10 GGMIF-VLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVY-TVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGP 513
            GG+I  V++Y    ISG H+NPAVT    + R    I+   Y  AQ  GAIC   ++KA + H  + +G    T   G +  S L  E+I TF +++ T+  ATD +       V  LA L +G AV +  +    I+G  +NPAR+ G A+  N    +D  WI+++GP
Sbjct:   88 GGLIVTVMIYAVGHISGAHMNPAVTLAFAVFRHFPWIQVPFYWAAQFTGAICASFVLKAVI-HPVDVIG---TTTPVGPHWHS-LVVEVIVTFNMMFVTLAVATDTRA------VGELAGLAVGSAVCITSIFAGAISGGSMNPARTLGPALASNK---FDGLWIYFLGP 243          
BLAST of CK740129 vs. ExPASy Swiss-Prot
Match: NIP11_ORYSJ (Aquaporin NIP1-1 OS=Oryza sativa subsp. japonica GN=NIP1-1 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 3.557e-13
Identity = 53/169 (31.36%), Postives = 78/169 (46.15%), Query Frame = 1
Query:    7 FGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGP 513
            +G  + V+VY    ISG H NPAVT      R+    +  AY  AQ LGA    G ++      +    G   T+ +G +  S L  E I TF L++ +       R+     +  LA L +G  + +  L   PI+G  +NPARS G A+I      +   W++ VGP
Sbjct:   87 WGLAVMVMVYAVGHISGAHFNPAVTLAFATCRRFPWRQVPAYAAAQMLGATLAAGTLRLMFGGRHEHFPG---TLPAGSDVQS-LVLEFIITFYLMFVISGVATDNRA-----IGELAGLAVGATILLNVLIAGPISGASMNPARSLGPAMIGGE---YRSIWVYIVGP 243          
BLAST of CK740129 vs. ExPASy Swiss-Prot
Match: NIP11_MAIZE (Aquaporin NIP1-1 OS=Zea mays GN=NIP1-1 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 3.557e-13
Identity = 50/169 (29.59%), Postives = 82/169 (48.52%), Query Frame = 1
Query:    7 FGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGP 513
            +G  + V+VY    ISG H NPAVT     + +    +  AY++AQ LGA    G ++      +    G   T+ +G ++  +L  EII TF L++ +       R+     +  LA L +G  + +  L   P++G  +NPARS G A++      +   W++ VGP
Sbjct:   83 WGLAVMVMVYAVGHISGAHFNPAVTLAFATSGRFPWRQLPAYVLAQMLGATLASGTLRLMFGGRHEHFPG---TLPTG-SEVQSLVIEIITTFYLMFVISGVATDNRA-----IGELAGLAVGATILLNVLIAGPVSGASMNPARSVGPALVSGE---YTSIWVYVVGP 239          
BLAST of CK740129 vs. ExPASy Swiss-Prot
Match: NIP22_ORYSJ (Aquaporin NIP2-2 OS=Oryza sativa subsp. japonica GN=NIP2-2 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 4.645e-13
Identity = 55/169 (32.54%), Postives = 85/169 (50.30%), Query Frame = 1
Query:   10 GGMIF-VLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGP 513
            GG+I  V++Y T  ISG H+NPAVT      R    I+   Y  AQ  GA+C   +++A + +    LG    T  +G +   AL  EI+ TF +++   +     R+     V  LA L +G AV +  +   P++G  +NPAR+   AV  N    +   WI+++GP
Sbjct:   91 GGLIVTVMIYATGHISGAHMNPAVTLSFAFFRHFPWIQVPFYWAAQFTGAMCAAFVLRAVL-YPIEVLG---TTTPTGPH-WHALVIEIVVTFNMMFVTCAVATDSRA-----VGELAGLAVGSAVCITSIFAGPVSGGSMNPARTLAPAVASN---VYTGLWIYFLGP 246          
BLAST of CK740129 vs. ExPASy Swiss-Prot
Match: NIP11_ARATH (Aquaporin NIP1-1 OS=Arabidopsis thaliana GN=NIP1-1 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 6.067e-13
Identity = 50/172 (29.07%), Postives = 78/172 (45.35%), Query Frame = 1
Query:    7 FGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGA---EIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGP 513
            +G  I VL+Y    ISG HINPAVT       +  L +  AY+++Q +G+      ++     +++   G  +        GS L A   E I TF L++ +       R+     +  LA L IG  V +  L   P++   +NP RS G A++Y     +   WI+ V P
Sbjct:   94 WGLTIMVLIYSLGHISGAHINPAVTIAFASCGRFPLKQVPAYVISQVIGSTLAAATLRLLFGLDHDVCSGKHDVFIGSSPVGSDLQAFTMEFIVTFYLMFIISGVATDNRA-----IGELAGLAIGSTVLLNVLIAAPVSSASMNPGRSLGPALVYG---CYKGIWIYLVAP 257          
BLAST of CK740129 vs. ExPASy Swiss-Prot
Match: NIP14_ORYSJ (Aquaporin NIP1-4 OS=Oryza sativa subsp. japonica GN=NIP1-4 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 7.923e-13
Identity = 52/176 (29.55%), Postives = 86/176 (48.86%), Query Frame = 1
Query:    4 AFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEY----NSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFS-ATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGPF 516
            A+G  +  +VY    +SG H+NPAVT G  +A +    RA AY +AQ   A     +++      +     +L GGA+          +L  E + TF L++ + + ATD      D  V  +A + +G  + +  L   P++G  +NPARS G A++ +   A    W++ +GPF
Sbjct:   94 AWGAAVMAMVYAVGHVSGAHLNPAVTLGFAVAGRFPWRRAPAYALAQTAAATAASVVLRLMFGGRHAPVPATLPGGAH--------AQSLVIEFVITFYLMFVIMAVATD------DQAVGHMAGVAVGGTIMLNVLFAGPVSGASMNPARSIGPALVGSKYTAL---WVYILGPF 252          
BLAST of CK740129 vs. ExPASy Swiss-Prot
Match: TIP51_MAIZE (Aquaporin TIP5-1 OS=Zea mays GN=TIP5-1 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.351e-12
Identity = 58/178 (32.58%), Postives = 81/178 (45.51%), Query Frame = 1
Query:    4 AFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIG--TFVLVYT--VFSATDPKR----SARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGP 513
            AFG  +F  V   A +SGGH+NPAVTF   +  ++ +  A+ Y  +Q LGA      +  F      S G    T           GA + G  TF+LVYT  V    +P+       R+     L  L +G       LA   +TG  +NPARSFG AV+  + K   +  ++W GP
Sbjct:   66 AFG--LFAAVLIAADVSGGHVNPAVTFAYAIGGRIGVPSAMFYWASQLLGATFACLSLNLF------SAGEEVPTTRIAVAMTGFGGAVLEGVLTFLLVYTVHVVGEREPRSRGGDGKREFAATALGALAVGLTQGAFVLAAGALTGASMNPARSFGPAVVSGHFK---NQAVYWAGP 232          
BLAST of CK740129 vs. ExPASy Swiss-Prot
Match: NIP1_NICAL (Probable aquaporin NIP-type OS=Nicotiana alata PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.351e-12
Identity = 56/175 (32.00%), Postives = 88/175 (50.29%), Query Frame = 1
Query:    7 FGGMIFVLVYCTAGISGGHINPAVT-----FGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFS-ATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGP 513
            +G ++ V+VY    ISG H NPAVT     FG F  ++V L     Y++AQ +G+I   G +         +  G   TV  G N G +L  EII +F+L++ +   ATD      D  +  +A + +G  + +      PI+G  +NPARS G A++ +    +   W++ VGP
Sbjct:   81 WGLIVMVMVYTVGYISGAHFNPAVTITFSIFGRFPWKQVPL-----YIIAQLMGSILASGTLALLFDVTPQAYFG---TVPVGSN-GQSLAIEIIISFLLMFVISGVATD------DRAIGQVAGIAVGMTITLNVFVAGPISGASMNPARSIGPAIVKH---VYTGLWVYVVGP 237          
The following BLAST results are available for this feature:
BLAST of CK740129 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 187
Match NameE-valueIdentityDescription
NIP22_MAIZE1.222e-1333.73Aquaporin NIP2-2 OS=Zea mays GN=NIP2-2 PE=2 SV=1[more]
AQPM_ARCFU1.268e-1334.09Probable aquaporin aqpM OS=Archaeoglobus fulgidus ... [more]
NIP21_ORYSJ2.085e-1335.29Aquaporin NIP2-1 OS=Oryza sativa subsp. japonica G... [more]
NIP11_ORYSJ3.557e-1331.36Aquaporin NIP1-1 OS=Oryza sativa subsp. japonica G... [more]
NIP11_MAIZE3.557e-1329.59Aquaporin NIP1-1 OS=Zea mays GN=NIP1-1 PE=2 SV=1[more]
NIP22_ORYSJ4.645e-1332.54Aquaporin NIP2-2 OS=Oryza sativa subsp. japonica G... [more]
NIP11_ARATH6.067e-1329.07Aquaporin NIP1-1 OS=Arabidopsis thaliana GN=NIP1-1... [more]
NIP14_ORYSJ7.923e-1329.55Aquaporin NIP1-4 OS=Oryza sativa subsp. japonica G... [more]
TIP51_MAIZE1.351e-1232.58Aquaporin TIP5-1 OS=Zea mays GN=TIP5-1 PE=2 SV=1[more]
NIP1_NICAL1.351e-1232.00Probable aquaporin NIP-type OS=Nicotiana alata PE=... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_6623 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE65G08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK740129 ID=CK740129; Name=CK740129; organism=Citrus sinensis; type=EST; length=574bp
TGGGCCTTTGGTGGCATGATCTTCGTCCTTGTTTACTGCACCGCTGGCAT
TTCTGGTGGTCACATTAACCCTGCTGTGACGTTTGGGCTGTTCTTGGCAA
GGAAGGTATCATTGATCAGGGCTGTGGCTTACATGGTGGCTCAGTGCTTG
GGTGCCATTTGCGGTGTTGGTTTGGTCAAGGCCTTCATGAAGCATGAGTA
CAACTCACTTGGTGGTGGTGCTAACACTGTGGCTTCTGGCTACAACAAAG
GATCAGCCTTGGGTGCTGAGATTATTGGTACCTTCGTGCTTGTTTACACA
GTCTTCTCGGCCACAGACCCCAAGAGAAGCGCTCGTGACTCTCACGTGCC
CGTTTTGGCTCCACTTCCAATTGGATTTGCTGTGTTCATGGTTCACTTGG
CCACCATCCCCATCACTGGAACGGGCATCAACCCTGCTAGGAGCTTTGGT
GCTGCTGTTATCTACAACAATGACAAGGCCTGGGATGACCATTGGATCTT
CTGGGTTGGTCCCTTTCGTTGGAGCATTGGCTGCAGCGGCATACCACCAG
TACATCTTGAGGGCTGCTGCTATC
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