CK740129
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK740129 vs. ExPASy Swiss-Prot
Match: NIP51_ARATH (Probable aquaporin NIP5-1 OS=Arabidopsis thaliana GN=NIP5-1 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 1.952e-11 Identity = 50/168 (29.76%), Postives = 77/168 (45.83%), Query Frame = 1 Query: 10 GGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGP 513 G + +++ T ISG H+NP++T R AY+ AQ +IC +K H + S G T+ S + G A E I TF+L++ V + R+ V LA + +G V + L P TG +NP R+ G AV N ++ W++ V P Sbjct: 118 GLAVMIIILSTGHISGAHLNPSLTIAFAALRHFPWAHVPAYIAAQVSASICASFALKGVF-HPFMS---GGVTIPS-VSLGQAFALEFIITFILLFVVTAVATDTRA-----VGELAGIAVGATVMLNILVAGPSTGGSMNPVRTLGPAVASGNYRSL---WVYLVAP 272
BLAST of CK740129 vs. ExPASy Swiss-Prot
Match: NIP31_ARATH (Aquaporin NIP3-1 OS=Arabidopsis thaliana GN=NIP3-1 PE=2 SV=2) HSP 1 Score: 68.9366 bits (167), Expect = 1.952e-11 Identity = 49/173 (28.32%), Postives = 83/173 (47.98%), Query Frame = 1 Query: 7 FGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKA--FMKHEYNSLGGG--ANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGP 513 +G ++ V++Y +SG H NPAV+ ++K + Y+ AQ LG+ +++ + + SL G T S N S + E I TF L++ + + KR+ A + IG + + L + PI+G +NPARS G A+I+ + D W++ V P Sbjct: 82 WGLVVTVMIYSIGHVSGAHFNPAVSIAFASSKKFPFNQVPGYIAAQLLGSTLAAAVLRLVFHLDDDVCSLKGDVYVGTYPSNSNTTSFV-MEFIATFNLMFVISAVATDKRATGS-----FAGIAIGATIVLDILFSGPISGASMNPARSLGPALIWG---CYKDLWLYIVSP 245
BLAST of CK740129 vs. ExPASy Swiss-Prot
Match: YFF4_YEAST (Uncharacterized membrane protein YFL054C OS=Saccharomyces cerevisiae GN=YFL054C PE=1 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 2.549e-11 Identity = 64/200 (32.00%), Postives = 84/200 (42.00%), Query Frame = 1 Query: 1 WAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGAN--TVASG----------YNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPV---LAPLPIGFAVFMVHLATIPITGTGINPARSFG----AAVIYNNDKA-----WDDHWIFWVGPFRWSI 528 W FG M+ V Y GISGGHINPAVT + + RK + Y+VAQ +GA G + + GG + T A+G +A E IG +LV + + D DS+ P + L IGF V + +A T INPAR G A++I A W W W GP I Sbjct: 388 WGFGCMLGV--YVAGGISGGHINPAVTISMAIFRKFPWKKVPVYIVAQIIGAYFGGAMAYGYFWSSITEFEGGPHIRTTATGACLFTDPKSYVTWRNAFFDEFIGASILVGCLMALLD------DSNAPPGNGMTALIIGFLVAAIGMALGYQTSFTINPARDLGPRIFASMIGYGPHAFHLTHWWWTWGAWGGPIAGGI 579
BLAST of CK740129 vs. ExPASy Swiss-Prot
Match: NIP41_ARATH (Putative aquaporin NIP4-1 OS=Arabidopsis thaliana GN=NIP4-1 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 2.549e-11 Identity = 47/169 (27.81%), Postives = 79/169 (46.75%), Query Frame = 1 Query: 7 FGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGP 513 +G ++ V++Y T ISG H NPAVT + R+ + Y+ AQ G++ ++ K + G + AL AEII +F+L++ + R+ V LA + +G + + PI+G +NPARS G A++ + W++ VGP Sbjct: 82 WGLIVMVMIYSTGHISGAHFNPAVTVTFAIFRRFPWHQVPLYIGAQFAGSLLASLTLRLMFKVTPEAFFG----TTPADSPARALVAEIIISFLLMFVISGVATDNRA-----VGELAGIAVGMTIMVNVFVAGPISGASMNPARSLGPALVMG---VYKHIWVYIVGP 238
BLAST of CK740129 vs. ExPASy Swiss-Prot
Match: NIP13_ORYSJ (Aquaporin NIP1-3 OS=Oryza sativa subsp. japonica GN=NIP1-3 PE=3 SV=2) HSP 1 Score: 68.5514 bits (166), Expect = 2.549e-11 Identity = 49/173 (28.32%), Postives = 76/173 (43.93%), Query Frame = 1 Query: 7 FGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFM----KHEYNSLGGGANTVASGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNDKAWDDHWIFWVGP 513 +G + V+VY ISG H+NPAVT + R AY AQ G+ ++A +H + + G++ +L E I TF L++ V R+ + LA L +G V + L PI+G +NPAR+ G A+I + W++ GP Sbjct: 93 WGLAVMVMVYSVGHISGAHLNPAVTLAFATCGRFPWRRVPAYAAAQVAGSAAASAALRALFGGAPEHFFGTAPAGSDV--------QSLAMEFIITFYLMFVVSGVATDNRA-----IGELAGLAVGATVLVNVLFAGPISGASMNPARTIGPAIILGR---YTGIWVYIAGP 249
BLAST of CK740129 vs. ExPASy Swiss-Prot
Match: GLPF_PSEAE (Glycerol uptake facilitator protein OS=Pseudomonas aeruginosa GN=glpF PE=3 SV=2) HSP 1 Score: 68.5514 bits (166), Expect = 2.549e-11 Identity = 50/167 (29.94%), Postives = 78/167 (46.71%), Query Frame = 1 Query: 1 WAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLV-----KAFMKHEY--NSLGGGANTVA----------SGYNKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFG 450 W G + + +Y +AG+SG H+NPAV+ L+L + Y+ AQ GA C LV F++ E N + G +++A + G A E++ T +L+ + + TD LAPL IG + ++ A P+TG +NPAR FG Sbjct: 51 WGVG--VSMAIYLSAGVSGAHLNPAVSIALWLFAGFEGRKLPFYITAQVAGAFCAAALVYTLYSSLFIEFEQAQNIVRGSQDSLALASVFSTYPHPALSVGQAFLVEVVITAILMAVIMALTDDGNGLPRGP---LAPLLIGLLIAVIGSAMGPLTGFAMNPARDFG 212
BLAST of CK740129 vs. ExPASy Swiss-Prot
Match: GLPF_STRR6 (Glycerol uptake facilitator protein OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6) GN=glpF PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 4.348e-11 Identity = 54/183 (29.51%), Postives = 85/183 (46.45%), Query Frame = 1 Query: 7 FGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVAYMVAQCLGAICGVGLVKAFMKHEYNSLGGGANTVASGYNKGSA-------LGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYN-------NDKAWDDHWIFWVGP 513 +G + V V+ + +S H+NPAVT G+ L + + Y++AQ GA+ G LV K Y + N +A+ ++ G A L +EI+GTFVLV T+F+ A + +G + + L+ TG +NPAR G ++++ D W WI VGP Sbjct: 45 WGIAVAVAVFVSGKLSPAHLNPAVTIGVALKGGLPWASVLPYILAQFAGAMLGQILVWLQFKPHYEAEENAGNILAT-FSTGPAIKDTVSNLISEILGTFVLVLTIFALGLYDFQAG------IGTFAVGTLIVGIGLSLGGTTGYALNPARDLGPRIMHSILPIPNKGDGDWSYAWIPVVGP 220 The following BLAST results are available for this feature:
BLAST of CK740129 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 187
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Sequences
The
following sequences are available for this feature:
EST sequence >CK740129 ID=CK740129; Name=CK740129; organism=Citrus sinensis; type=EST; length=574bpback to top |