CK740134
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK740134 vs. ExPASy Swiss-Prot
Match: RK14_SORBI (50S ribosomal protein L14, chloroplastic OS=Sorghum bicolor GN=rpl14 PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 2.267e-13 Identity = 45/124 (36.29%), Postives = 73/124 (58.87%), Query Frame = 1 Query: 64 QWQQPVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDL---RKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADL-WPRIASAANAIV 423 Q Q +N ADN+GA+ L I V G G A +GD+++A +K P + R +V+ AVIVR RK ++ DG+ + ++DNA VI++ KG KG+ + G + +E +L + +I S A ++ Sbjct: 3 QPQTLLNVADNSGARKLMCIRVIGAAGNQRY---ARIGDVIIAVIKDAVPKMPLERSEVIRAVIVRTRKEFKGDDGIIIRYDDNAAVIIDQKGNPKGTRVFGAVAEELRELNFTKIVSLAPEVL 123
BLAST of CK740134 vs. ExPASy Swiss-Prot
Match: RK14_FAGEA (50S ribosomal protein L14, chloroplastic OS=Fagopyrum esculentum subsp. ancestrale GN=rpl14 PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 2.267e-13 Identity = 45/124 (36.29%), Postives = 75/124 (60.48%), Query Frame = 1 Query: 64 QWQQPVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDL---RKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADL-WPRIASAANAIV 423 Q Q +N ADN+GA+ L I + G R A +GD+++A +K+ P++ R +V+ AVIVR RK +R++G+ + ++DNA VI++ KG KG+ + G I +E L + +I S A ++ Sbjct: 3 QPQTYLNVADNSGARELMCIRIIGASNRRY----AHIGDIIVAVIKEAIPNMPLERSEVIRAVIVRTRKELKRENGMIIRYDDNAAVIIDQKGNPKGTRVFGAIARELRQLNFTKIVSLAPEVL 122
BLAST of CK740134 vs. ExPASy Swiss-Prot
Match: RL14_CYAP8 (50S ribosomal protein L14 OS=Cyanothece sp. (strain PCC 8801) GN=rplN PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 2.961e-13 Identity = 45/124 (36.29%), Postives = 71/124 (57.26%), Query Frame = 1 Query: 64 QWQQPVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDL---RKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADL-WPRIASAANAIV 423 Q Q +N ADN+GA+ L + V G +GD+++A VK P++ R +++ AVIVR R+P RR G+ + F+DNA VI+N G KG+ + GP+ +E D + +I S A ++ Sbjct: 3 QQQTYLNVADNSGARKLMCLRVLGT----GNCRYGEIGDVIIAVVKDAIPNMPIKRSEIVRAVIVRTRQPVRRASGMSIRFDDNAAVIINNDGNPKGTRVFGPVARELRDKNYTKIVSLAPEVL 122
BLAST of CK740134 vs. ExPASy Swiss-Prot
Match: RK14_PHATR (50S ribosomal protein L14, chloroplastic OS=Phaeodactylum tricornutum GN=rpl14 PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 2.961e-13 Identity = 45/122 (36.89%), Postives = 71/122 (58.20%), Query Frame = 1 Query: 70 QQPVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDL---RKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADL-WPRIASAANAIV 423 Q + ADNTGAK + I V G + A +GD ++A VK+ P++ R V+ AV+VR +K RR+DG+++ F+DNA VIVN +G+ + GP+ +E D + +I S A ++ Sbjct: 5 QTMLTVADNTGAKKVMCIRVLGGNKKY-----AKIGDTIIAVVKEALPNMPVKRSDVVRAVVVRTKKSIRRQDGMYIRFDDNAAVIVNMDNNPRGTRVFGPVAREIRDKNYSKIVSLAPEVL 121
BLAST of CK740134 vs. ExPASy Swiss-Prot
Match: RK14_NEPOL (50S ribosomal protein L14, chloroplastic OS=Nephroselmis olivacea GN=rpl14 PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 2.961e-13 Identity = 44/110 (40.00%), Postives = 65/110 (59.09%), Query Frame = 1 Query: 64 QWQQPVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK---VMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECAD 384 Q Q + ADN+GA+ L I V G + R A +GD+++A VK P++ K V+ AV+VR KP RR G+ + F+DNA VIVN +G +G+ + GP+ +E D Sbjct: 3 QPQTILQVADNSGARQLMCIRVLGGRKRY-----ASIGDVIIAVVKDAIPNMPVKKSDVVRAVVVRTSKPVRRDTGMLIRFDDNAAVIVNQEGNPRGTRVFGPVARELRD 107
BLAST of CK740134 vs. ExPASy Swiss-Prot
Match: RK14_MAIZE (50S ribosomal protein L14, chloroplastic OS=Zea mays GN=rpl14 PE=3 SV=2) HSP 1 Score: 75.0998 bits (183), Expect = 2.961e-13 Identity = 42/111 (37.84%), Postives = 66/111 (59.46%), Query Frame = 1 Query: 64 QWQQPVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDL---RKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADL 387 Q Q +N ADN+GA+ L I V G G A +GD+++A +K P + R +V+ AVIVR RK ++ DG+ + ++DNA VI++ KG KG+ + G + +E +L Sbjct: 3 QPQTLLNVADNSGARKLMCIRVIGAAGNQRY---ARIGDVIIAVIKDAVPQMPLERSEVIRAVIVRTRKEFKGDDGIIIRYDDNAAVIIDQKGNPKGTRVFGAVAEELREL 110
BLAST of CK740134 vs. ExPASy Swiss-Prot
Match: RK14_GRATL (50S ribosomal protein L14, chloroplastic OS=Gracilaria tenuistipitata var. liui GN=rpl14 PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 2.961e-13 Identity = 46/124 (37.10%), Postives = 71/124 (57.26%), Query Frame = 1 Query: 64 QWQQPVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDL---RKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADL-WPRIASAANAIV 423 Q Q +N ADN+GA+ + I V G N A +GD+++ VK P++ + ++ AVIVR +K RR DG+ + F+DNA VI+N + +G+ + GPI KE D + +I S A +V Sbjct: 3 QIQSYLNIADNSGARKIMCIQVLGS----NNPHYANIGDIIIGVVKDALPNMPIKKSDIIRAVIVRTKKTIRRNDGMSIRFDDNAAVIINQENNPRGTRVFGPIAKELRDKNFSKIISLAAEVV 122
BLAST of CK740134 vs. ExPASy Swiss-Prot
Match: RL14_HELMI (50S ribosomal protein L14 OS=Heliobacterium modesticaldum (strain ATCC 51547 / Ice1) GN=rplN PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 3.868e-13 Identity = 45/110 (40.91%), Postives = 64/110 (58.18%), Query Frame = 1 Query: 64 QWQQPVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPD---LRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECAD 384 Q + + DNTGAK L I V G G R S VGD+++A+VK+ P + V+ AV+VR RKP +R DG ++ F +NA VI+N + KG+ I GP+ +E D Sbjct: 3 QQETRLRVGDNTGAKELLCIRVLG--GSYRRYAS--VGDIIVASVKEATPGGVVKKGDVVKAVVVRTRKPIKRPDGSYIRFSENAAVIINEQKNPKGTRIFGPVARELRD 108
BLAST of CK740134 vs. ExPASy Swiss-Prot
Match: RL14_FRASN (50S ribosomal protein L14 OS=Frankia sp. (strain EAN1pec) GN=rplN PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 3.868e-13 Identity = 42/110 (38.18%), Postives = 64/110 (58.18%), Query Frame = 1 Query: 64 QWQQPVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDL---RKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECAD 384 Q + + ADNTGA+ + I V G GR A +GD+++ TVK P R V+ AV+VR +K RR DG ++ F++NA V++ G+ +G+ I GP+G+E D Sbjct: 3 QQESRLRVADNTGAREILCIRVLGGSGRRY----AGIGDIIVGTVKDALPGAGVKRGDVVKAVVVRTKKERRRPDGSYIRFDENAAVLIRDGGDPRGTRIFGPVGRELRD 108
BLAST of CK740134 vs. ExPASy Swiss-Prot
Match: RL14_CHLPB (50S ribosomal protein L14 OS=Chlorobium phaeobacteroides (strain BS1) GN=rplN PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 3.868e-13 Identity = 44/102 (43.14%), Postives = 62/102 (60.78%), Query Frame = 1 Query: 88 ADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPD---LRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECAD 384 ADN+GAK + I V G GR A +GD +M TVK P +K+V AV+VR K RRKDG ++ F++NA V++N +GE +G+ I GP+ +E D Sbjct: 11 ADNSGAKKVRCIHVFGGTGRRY----ASLGDQIMVTVKAAVPGGVVKKKEVTKAVVVRCAKEKRRKDGSYIRFDENAVVLLNAQGEPRGTRIFGPVARELRD 108 The following BLAST results are available for this feature:
BLAST of CK740134 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 461
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Sequences
The
following sequences are available for this feature:
EST sequence >CK740134 ID=CK740134; Name=CK740134; organism=Citrus sinensis; type=EST; length=596bpback to top |